RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.62□□□□□ -0.55
LMX1B-202ENST00000373474 HAX1O00165 279 aa11.62□□□□□ -0.55
LMX1B-202ENST00000373474 SELLP14151 372 aa11.62□□□□□ -0.55
LMX1B-202ENST00000373474 CD24P25063 80 aa11.62□□□□□ -0.55
LMX1B-202ENST00000373474 CDKN1AP38936 164 aa11.62□□□□□ -0.55
LMX1B-202ENST00000373474 NUP35Q8NFH5 326 aa11.62□□□□□ -0.55
LMX1B-202ENST00000373474 H0YJW9 148 aa11.62□□□□□ -0.55
LMX1B-202ENST00000373474 GAFA1Q96PS6 74 aa11.62□□□□□ -0.55
LMX1B-202ENST00000373474 A0A0U1RRA0 63 aa11.62□□□□□ -0.55
LMX1B-202ENST00000373474 IGHV3-11P01762 117 aa11.62□□□□□ -0.55
LMX1B-202ENST00000373474 PMVKQ15126 192 aa11.62□□□□□ -0.55
LMX1B-202ENST00000373474 SPSB3Q6PJ21 355 aa11.62□□□□□ -0.55
LMX1B-202ENST00000373474 NPIPB5A8MRT5 1133 aa11.61□□□□□ -0.55
LMX1B-202ENST00000373474 LYNX1G3V0Z9 82 aa11.61□□□□□ -0.55
LMX1B-202ENST00000373474 LYNX1P0DP58 116 aa11.61□□□□□ -0.55
LMX1B-202ENST00000373474 C20orf204Q6ZNR8 217 aa11.61□□□□□ -0.55
LMX1B-202ENST00000373474 PLXNA4Q9HCM2 1894 aa11.61□□□□□ -0.55
LMX1B-202ENST00000373474 C10orf55Q5SWW7 151 aa11.61□□□□□ -0.55
LMX1B-202ENST00000373474 COL4A6Q14031 1691 aa11.61□□□□□ -0.55
LMX1B-202ENST00000373474 TMEM258P61165 79 aa11.61□□□□□ -0.55
LMX1B-202ENST00000373474 RBMY1FQ15415 496 aaKnown RBP11.61□□□□□ -0.55
LMX1B-202ENST00000373474 ZC2HC1BQ5TFG8 222 aa11.61□□□□□ -0.55
LMX1B-202ENST00000373474 DPH3P1Q9H4G8 78 aa11.61□□□□□ -0.55
LMX1B-202ENST00000373474 C7orf69Q9H7B7 122 aa11.61□□□□□ -0.55
LMX1B-202ENST00000373474 IGHV1-3A0A0C4DH29 117 aa11.61□□□□□ -0.55
LMX1B-202ENST00000373474 TMEM178BH3BS89 294 aa11.61□□□□□ -0.55
LMX1B-202ENST00000373474 ZNF415Q09FC8 603 aa11.61□□□□□ -0.55
LMX1B-202ENST00000373474 LYZL1Q6UWQ5 148 aa11.61□□□□□ -0.55
LMX1B-202ENST00000373474 FNDC10F2Z333 226 aa11.6□□□□□ -0.55
LMX1B-202ENST00000373474 K7EP34 96 aa11.6□□□□□ -0.55
LMX1B-202ENST00000373474 TCRAP04437 139 aa11.6□□□□□ -0.55
LMX1B-202ENST00000373474 PPIFP30405 207 aaKnown RBP11.6□□□□□ -0.55
LMX1B-202ENST00000373474 RNF5Q99942 180 aa11.6□□□□□ -0.55
LMX1B-202ENST00000373474 GFRA4Q9GZZ7 299 aa11.6□□□□□ -0.55
LMX1B-202ENST00000373474 NPC2P61916 151 aa11.6□□□□□ -0.55
LMX1B-202ENST00000373474 STHQ8IWL8 128 aa11.6□□□□□ -0.55
LMX1B-202ENST00000373474 SCRT1Q9BWW7 348 aa11.6□□□□□ -0.55
LMX1B-202ENST00000373474 GLMPQ8WWB7 406 aa11.6□□□□□ -0.55
LMX1B-202ENST00000373474 SNHG12Q9BXW3 62 aa11.6□□□□□ -0.55
LMX1B-202ENST00000373474 TRGV4A0A0C4DH28 118 aa11.6□□□□□ -0.55
LMX1B-202ENST00000373474 NCR2O95944 276 aa11.6□□□□□ -0.55
LMX1B-202ENST00000373474 PLXNA2O75051 1894 aa11.6□□□□□ -0.55
LMX1B-202ENST00000373474 IGKV2-40A0A087WW87 121 aaPredicted RBP11.6□□□□□ -0.55
LMX1B-202ENST00000373474 IGKV2D-40P01614 121 aaPredicted RBP11.6□□□□□ -0.55
LMX1B-202ENST00000373474 SIGLEC15Q6ZMC9 328 aa11.6□□□□□ -0.55
LMX1B-202ENST00000373474 CSRP1P21291 193 aaKnown RBP11.59□□□□□ -0.55
LMX1B-202ENST00000373474 EXOC3-AS1Q8N2X6 119 aa11.59□□□□□ -0.55
LMX1B-202ENST00000373474 BMPERQ8N8U9 685 aa11.59□□□□□ -0.55
LMX1B-202ENST00000373474 A0A1B0GWJ7 208 aa11.59□□□□□ -0.55
LMX1B-202ENST00000373474 PMS2P5A8MQ11 134 aa11.59□□□□□ -0.55
LMX1B-202ENST00000373474 Q6ZRM9 215 aa11.59□□□□□ -0.55
LMX1B-202ENST00000373474 CHCHD5Q9BSY4 110 aa11.59□□□□□ -0.55
LMX1B-202ENST00000373474 PTPRDP23468 1912 aa11.59□□□□□ -0.55
LMX1B-202ENST00000373474 IGKV1D-17A0A075B6S4 117 aa11.59□□□□□ -0.55
LMX1B-202ENST00000373474 SLAQ13239 276 aa11.59□□□□□ -0.55
LMX1B-202ENST00000373474 TMEM158Q8WZ71 300 aa11.59□□□□□ -0.55
LMX1B-202ENST00000373474 K7EP13 123 aa11.59□□□□□ -0.55
LMX1B-202ENST00000373474 TIMM21Q9BVV7 248 aa11.59□□□□□ -0.55
LMX1B-202ENST00000373474 ZNF329Q86UD4 541 aa11.58□□□□□ -0.55
LMX1B-202ENST00000373474 ETV2O00321 342 aaPredicted RBP11.58□□□□□ -0.56
LMX1B-202ENST00000373474 MGAMO43451 1857 aa11.58□□□□□ -0.56
LMX1B-202ENST00000373474 RALGAPA1Q6GYQ0 2036 aa11.58□□□□□ -0.56
LMX1B-202ENST00000373474 PAX8Q06710 450 aa11.58□□□□□ -0.56
LMX1B-202ENST00000373474 C9JQL5 133 aa11.58□□□□□ -0.56
LMX1B-202ENST00000373474 PRADC1Q9BSG0 188 aa11.58□□□□□ -0.56
LMX1B-202ENST00000373474 IGHV2-70P01814 119 aa11.57□□□□□ -0.56
LMX1B-202ENST00000373474 GAGE12HA6NDE8 117 aa11.57□□□□□ -0.56
LMX1B-202ENST00000373474 MMP23AO75900 390 aa11.57□□□□□ -0.56
LMX1B-202ENST00000373474 VMO1Q7Z5L0 202 aa11.57□□□□□ -0.56
LMX1B-202ENST00000373474 LYPD1Q8N2G4 141 aa11.57□□□□□ -0.56
LMX1B-202ENST00000373474 SEC16AO15027 2179 aa11.57□□□□□ -0.56
LMX1B-202ENST00000373474 ZNF876PQ49A33 203 aa11.57□□□□□ -0.56
LMX1B-202ENST00000373474 UBL5Q9BZL1 73 aa11.57□□□□□ -0.56
LMX1B-202ENST00000373474 FCN3O75636 299 aa11.56□□□□□ -0.56
LMX1B-202ENST00000373474 ZNF672Q499Z4 452 aaPredicted RBP11.56□□□□□ -0.56
LMX1B-202ENST00000373474 IGKV1-6A0A0C4DH72 117 aa11.56□□□□□ -0.56
LMX1B-202ENST00000373474 VGLL1Q99990 258 aa11.56□□□□□ -0.56
LMX1B-202ENST00000373474 LINC00205P59089 165 aa11.56□□□□□ -0.56
LMX1B-202ENST00000373474 C10orf91Q5T1B1 145 aa11.56□□□□□ -0.56
LMX1B-202ENST00000373474 GAGE12JA6NER3 117 aa11.56□□□□□ -0.56
LMX1B-202ENST00000373474 SH2D1AO60880 128 aa11.56□□□□□ -0.56
LMX1B-202ENST00000373474 GAGE7O76087 117 aa11.56□□□□□ -0.56
LMX1B-202ENST00000373474 GAGE12FP0CL80 117 aa11.56□□□□□ -0.56
LMX1B-202ENST00000373474 GAGE12GP0CL81 117 aa11.56□□□□□ -0.56
LMX1B-202ENST00000373474 GAGE12IP0CL82 117 aa11.56□□□□□ -0.56
LMX1B-202ENST00000373474 VDAC2P45880 294 aaPredicted RBP11.56□□□□□ -0.56
LMX1B-202ENST00000373474 RPL32P62910 135 aaKnown RBP11.56□□□□□ -0.56
LMX1B-202ENST00000373474 GAGE4Q13068 117 aa11.56□□□□□ -0.56
LMX1B-202ENST00000373474 WNT2P09544 360 aa11.56□□□□□ -0.56
LMX1B-202ENST00000373474 RNASE2P10153 161 aaKnown RBP11.56□□□□□ -0.56
LMX1B-202ENST00000373474 CD33P20138 364 aa11.56□□□□□ -0.56
LMX1B-202ENST00000373474 CMC4P56277 68 aaPredicted RBP11.56□□□□□ -0.56
LMX1B-202ENST00000373474 LY6G5BQ8NDX9 201 aa11.56□□□□□ -0.56
LMX1B-202ENST00000373474 NPSP0C0P6 89 aa11.55□□□□□ -0.56
LMX1B-202ENST00000373474 FREM3P0C091 2139 aa11.55□□□□□ -0.56
LMX1B-202ENST00000373474 SELENOKQ9Y6D0 94 aa11.55□□□□□ -0.56
LMX1B-202ENST00000373474 MBD3L4A6NDZ8 208 aaPredicted RBP11.55□□□□□ -0.56
LMX1B-202ENST00000373474 MBD3L3A6NE82 208 aaPredicted RBP11.55□□□□□ -0.56
LMX1B-202ENST00000373474 MBD3L5A6NJ08 208 aaPredicted RBP11.55□□□□□ -0.56
LMX1B-202ENST00000373474 IGHG3P01860 377 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms