RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 BPIFA4PQ86YQ2 179 aa10.97□□□□□ -0.65
USP49-201ENST00000373006 RPRMLQ8N4K4 120 aa10.97□□□□□ -0.65
USP49-201ENST00000373006 Q9H3A6 140 aa10.97□□□□□ -0.65
USP49-201ENST00000373006 C19orf71A6NCJ1 209 aa10.97□□□□□ -0.65
USP49-201ENST00000373006 TCRAP04437 139 aa10.97□□□□□ -0.65
USP49-201ENST00000373006 SUB1P53999 127 aaKnown RBP eCLIP10.97□□□□□ -0.65
USP49-201ENST00000373006 ARF6P62330 175 aa10.97□□□□□ -0.65
USP49-201ENST00000373006 TMEM95Q3KNT9 176 aa10.97□□□□□ -0.65
USP49-201ENST00000373006 FAM71F2Q6NXP2 309 aa10.97□□□□□ -0.65
USP49-201ENST00000373006 OR10X1Q8NGY0 326 aa10.97□□□□□ -0.65
USP49-201ENST00000373006 RAI1Q7Z5J4 1906 aaPredicted RBP10.97□□□□□ -0.65
USP49-201ENST00000373006 A0A1W2PPI3 338 aa10.96□□□□□ -0.65
USP49-201ENST00000373006 LTAP01374 205 aa10.96□□□□□ -0.65
USP49-201ENST00000373006 IGLC1P0CG04 106 aa10.96□□□□□ -0.65
USP49-201ENST00000373006 C22orf34Q6ZV56 151 aa10.96□□□□□ -0.65
USP49-201ENST00000373006 PRNTQ86SH4 94 aa10.96□□□□□ -0.65
USP49-201ENST00000373006 OR5AN1Q8NGI8 311 aa10.96□□□□□ -0.65
USP49-201ENST00000373006 OR4C13Q8NGP0 309 aa10.96□□□□□ -0.65
USP49-201ENST00000373006 JMJD8Q96S16 334 aa10.96□□□□□ -0.65
USP49-201ENST00000373006 ENSAO43768 121 aaKnown RBP10.96□□□□□ -0.66
USP49-201ENST00000373006 EXOC3-AS1Q8N2X6 119 aa10.96□□□□□ -0.66
USP49-201ENST00000373006 DEFB124Q8NES8 71 aa10.96□□□□□ -0.66
USP49-201ENST00000373006 CEP295Q9C0D2 2601 aa10.96□□□□□ -0.66
USP49-201ENST00000373006 APC2O95996 2303 aa10.96□□□□□ -0.66
USP49-201ENST00000373006 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.96□□□□□ -0.66
USP49-201ENST00000373006 PPIAL4CA0A0B4J2A2 164 aa10.96□□□□□ -0.66
USP49-201ENST00000373006 OR5AL1P0C617 328 aa10.96□□□□□ -0.66
USP49-201ENST00000373006 ZNF883P0CG24 379 aa10.96□□□□□ -0.66
USP49-201ENST00000373006 PPIAL4GP0DN37 164 aa10.96□□□□□ -0.66
USP49-201ENST00000373006 ZNF474Q6S9Z5 364 aaPredicted RBP10.96□□□□□ -0.66
USP49-201ENST00000373006 SEM1Q6ZVN7 128 aa10.96□□□□□ -0.66
USP49-201ENST00000373006 WFDC3Q8IUB2 231 aa10.96□□□□□ -0.66
USP49-201ENST00000373006 OR8A1Q8NGG7 326 aa10.96□□□□□ -0.66
USP49-201ENST00000373006 TMEM167AQ8TBQ9 72 aa10.96□□□□□ -0.66
USP49-201ENST00000373006 H1FXQ92522 213 aaKnown RBP10.96□□□□□ -0.66
USP49-201ENST00000373006 NCR2O95944 276 aa10.95□□□□□ -0.66
USP49-201ENST00000373006 DEFB109BQ30KR1 87 aa10.95□□□□□ -0.66
USP49-201ENST00000373006 THAP8Q8NA92 274 aa10.95□□□□□ -0.66
USP49-201ENST00000373006 FMC1Q96HJ9 113 aa10.95□□□□□ -0.66
USP49-201ENST00000373006 NDFIP1Q9BT67 221 aa10.95□□□□□ -0.66
USP49-201ENST00000373006 C1RLQ9NZP8 487 aa10.95□□□□□ -0.66
USP49-201ENST00000373006 SPCS1Q9Y6A9 102 aa10.95□□□□□ -0.66
USP49-201ENST00000373006 TM4SF5O14894 197 aa10.95□□□□□ -0.66
USP49-201ENST00000373006 HLA-DRB1P01911 266 aa10.95□□□□□ -0.66
USP49-201ENST00000373006 APOHP02749 345 aaPredicted RBP10.95□□□□□ -0.66
USP49-201ENST00000373006 CEACAM3P40198 252 aa10.95□□□□□ -0.66
USP49-201ENST00000373006 PRB3Q04118 309 aaPredicted RBP10.95□□□□□ -0.66
USP49-201ENST00000373006 STXBP6Q8NFX7 210 aa10.95□□□□□ -0.66
USP49-201ENST00000373006 NEU4Q8WWR8 484 aaPredicted RBP10.95□□□□□ -0.66
USP49-201ENST00000373006 PET117Q6UWS5 81 aa10.94□□□□□ -0.66
USP49-201ENST00000373006 GOLT1AQ6ZVE7 132 aa10.94□□□□□ -0.66
USP49-201ENST00000373006 OR10AG1Q8NH19 301 aa10.94□□□□□ -0.66
USP49-201ENST00000373006 LINC00574Q9H8X3 128 aa10.94□□□□□ -0.66
USP49-201ENST00000373006 ANKRD11Q6UB99 2663 aaPredicted RBP10.94□□□□□ -0.66
USP49-201ENST00000373006 TEX48A0A1B0GUV7 120 aa10.94□□□□□ -0.66
USP49-201ENST00000373006 GATA4P43694 442 aa10.94□□□□□ -0.66
USP49-201ENST00000373006 OR2K2Q8NGT1 345 aa10.94□□□□□ -0.66
USP49-201ENST00000373006 LINC00312Q9Y6C7 94 aa10.94□□□□□ -0.66
USP49-201ENST00000373006 CACNA1BQ00975 2339 aa10.94□□□□□ -0.66
USP49-201ENST00000373006 IGLV3-9A0A075B6K5 115 aa10.93□□□□□ -0.66
USP49-201ENST00000373006 CD5LO43866 347 aa10.93□□□□□ -0.66
USP49-201ENST00000373006 IGLV2-23P01705 113 aa10.93□□□□□ -0.66
USP49-201ENST00000373006 ARMS2P0C7Q2 107 aa10.93□□□□□ -0.66
USP49-201ENST00000373006 FAM106CPP0CH98 169 aa10.93□□□□□ -0.66
USP49-201ENST00000373006 GP9P14770 177 aa10.93□□□□□ -0.66
USP49-201ENST00000373006 HIST1H1AQ02539 215 aaPredicted RBP10.93□□□□□ -0.66
USP49-201ENST00000373006 FAM106AQ4KMX7 169 aa10.93□□□□□ -0.66
USP49-201ENST00000373006 TMEM200BQ69YZ2 307 aa10.93□□□□□ -0.66
USP49-201ENST00000373006 SRSF12Q8WXF0 261 aaKnown RBP10.93□□□□□ -0.66
USP49-201ENST00000373006 HSPB8Q9UJY1 196 aa10.93□□□□□ -0.66
USP49-201ENST00000373006 CSMD1Q96PZ7 3565 aa10.93□□□□□ -0.66
USP49-201ENST00000373006 WNK2Q9Y3S1 2297 aa10.93□□□□□ -0.66
USP49-201ENST00000373006 FCN3O75636 299 aa10.93□□□□□ -0.66
USP49-201ENST00000373006 LGALS7P47929 136 aa10.93□□□□□ -0.66
USP49-201ENST00000373006 NMUP48645 174 aa10.93□□□□□ -0.66
USP49-201ENST00000373006 LOC389332A0A1B0GUA5 103 aa10.93□□□□□ -0.66
USP49-201ENST00000373006 DLX1P56177 255 aa10.93□□□□□ -0.66
USP49-201ENST00000373006 VSTM2AQ8TAG5 236 aa10.93□□□□□ -0.66
USP49-201ENST00000373006 AP5S1Q9NUS5 200 aa10.93□□□□□ -0.66
USP49-201ENST00000373006 SOX21Q9Y651 276 aaPredicted RBP10.93□□□□□ -0.66
USP49-201ENST00000373006 G3V4G9 280 aa10.92□□□□□ -0.66
USP49-201ENST00000373006 LYZP61626 148 aa10.92□□□□□ -0.66
USP49-201ENST00000373006 TMEM97Q5BJF2 176 aa10.92□□□□□ -0.66
USP49-201ENST00000373006 CT83Q5H943 113 aa10.92□□□□□ -0.66
USP49-201ENST00000373006 C2orf91Q6ZV80 131 aa10.92□□□□□ -0.66
USP49-201ENST00000373006 PRSS3P2Q8NHM4 247 aa10.92□□□□□ -0.66
USP49-201ENST00000373006 A0A0G2JLM5 398 aa10.92□□□□□ -0.66
USP49-201ENST00000373006 RBPJQ06330 500 aa10.92□□□□□ -0.66
USP49-201ENST00000373006 ZNF492Q9P255 531 aa10.92□□□□□ -0.66
USP49-201ENST00000373006 CNTFRP26992 372 aa10.91□□□□□ -0.66
USP49-201ENST00000373006 RAB9AP51151 201 aa10.91□□□□□ -0.66
USP49-201ENST00000373006 TIMM23BQ5SRD1 257 aa10.91□□□□□ -0.66
USP49-201ENST00000373006 Q86TA4 180 aa10.91□□□□□ -0.66
USP49-201ENST00000373006 GFRA4Q9GZZ7 299 aa10.91□□□□□ -0.66
USP49-201ENST00000373006 TSSC4Q9Y5U2 329 aaPredicted RBP10.91□□□□□ -0.66
USP49-201ENST00000373006 TRAV17A0A0B4J275 112 aa10.91□□□□□ -0.66
USP49-201ENST00000373006 SERTM2A0A1B0GWG4 89 aa10.91□□□□□ -0.66
USP49-201ENST00000373006 INS-IGF2F8WCM5 200 aa10.91□□□□□ -0.66
USP49-201ENST00000373006 FAM27E3Q08E93 113 aa10.91□□□□□ -0.66
USP49-201ENST00000373006 KIR3DS1Q14943 382 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms