RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 RNASEKQ6P5S7 137 aaKnown RBP9.16□□□□□ -0.94
TSPAN1-201ENST00000372003 SLC25A48Q6ZT89 311 aaKnown RBP9.16□□□□□ -0.94
TSPAN1-201ENST00000372003 OR9G1Q8NH87 305 aa9.16□□□□□ -0.94
TSPAN1-201ENST00000372003 GPR82Q96P67 336 aa9.16□□□□□ -0.94
TSPAN1-201ENST00000372003 NDFIP1Q9BT67 221 aa9.16□□□□□ -0.94
TSPAN1-201ENST00000372003 HINT2Q9BX68 163 aa9.16□□□□□ -0.94
TSPAN1-201ENST00000372003 PRSS22Q9GZN4 317 aa9.16□□□□□ -0.94
TSPAN1-201ENST00000372003 NDUFA4L2Q9NRX3 87 aa9.16□□□□□ -0.94
TSPAN1-201ENST00000372003 CCDC168Q8NDH2 2452 aa9.16□□□□□ -0.94
TSPAN1-201ENST00000372003 TCRBV4S1A1TA0A5B7 111 aa9.15□□□□□ -0.94
TSPAN1-201ENST00000372003 OR4C46A6NHA9 309 aa9.15□□□□□ -0.94
TSPAN1-201ENST00000372003 HIGD1CA8MV81 97 aa9.15□□□□□ -0.94
TSPAN1-201ENST00000372003 HSBP1L1C9JCN9 74 aa9.15□□□□□ -0.94
TSPAN1-201ENST00000372003 SYS1-DBNDD2H3BUS1 97 aa9.15□□□□□ -0.94
TSPAN1-201ENST00000372003 LIPFP07098 398 aa9.15□□□□□ -0.94
TSPAN1-201ENST00000372003 CT45A6P0DMU7 189 aa9.15□□□□□ -0.94
TSPAN1-201ENST00000372003 CT45A5P0DMU8 189 aa9.15□□□□□ -0.94
TSPAN1-201ENST00000372003 CT45A7P0DMV0 189 aa9.15□□□□□ -0.94
TSPAN1-201ENST00000372003 RPL8P62917 257 aaKnown RBP9.15□□□□□ -0.94
TSPAN1-201ENST00000372003 FAM120AOSQ5T036 256 aa9.15□□□□□ -0.94
TSPAN1-201ENST00000372003 ATOH7Q8N100 152 aa9.15□□□□□ -0.94
TSPAN1-201ENST00000372003 DEFB125Q8N687 156 aa9.15□□□□□ -0.94
TSPAN1-201ENST00000372003 VSTM2AQ8TAG5 236 aa9.15□□□□□ -0.94
TSPAN1-201ENST00000372003 FXYD5Q96DB9 178 aa9.15□□□□□ -0.94
TSPAN1-201ENST00000372003 SSBP3Q9BWW4 388 aaPredicted RBP9.15□□□□□ -0.94
TSPAN1-201ENST00000372003 RPP21Q9H633 154 aaKnown RBP9.15□□□□□ -0.94
TSPAN1-201ENST00000372003 CA1P00915 261 aaPredicted RBP9.14□□□□□ -0.95
TSPAN1-201ENST00000372003 MAJINQ3KP22 176 aa9.14□□□□□ -0.95
TSPAN1-201ENST00000372003 FAM71F2Q6NXP2 309 aa9.14□□□□□ -0.95
TSPAN1-201ENST00000372003 SLC25A34Q6PIV7 304 aa9.14□□□□□ -0.95
TSPAN1-201ENST00000372003 ZNF833PQ6ZTB9 187 aa9.14□□□□□ -0.95
TSPAN1-201ENST00000372003 ZNRF1Q8ND25 227 aa9.14□□□□□ -0.95
TSPAN1-201ENST00000372003 FMC1Q96HJ9 113 aa9.14□□□□□ -0.95
TSPAN1-201ENST00000372003 URB1-AS1Q96HZ7 61 aa9.14□□□□□ -0.95
TSPAN1-201ENST00000372003 MLST8Q9BVC4 326 aa9.14□□□□□ -0.95
TSPAN1-201ENST00000372003 RPUSD1Q9UJJ7 312 aaKnown RBP9.14□□□□□ -0.95
TSPAN1-201ENST00000372003 EPDR1Q9UM22 224 aa9.14□□□□□ -0.95
TSPAN1-201ENST00000372003 TANC2Q9HCD6 1990 aa9.14□□□□□ -0.95
TSPAN1-201ENST00000372003 VPS13CQ709C8 3753 aa9.14□□□□□ -0.95
TSPAN1-201ENST00000372003 CD5LO43866 347 aa9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 LEPROTL1O95214 131 aa9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 FSTL3O95633 263 aa9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 APOA2P02652 100 aa9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 SAA1P0DJI8 122 aaPredicted RBP9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 GATA2P23769 480 aaPredicted RBP9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 VAMP3Q15836 100 aa9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 TMEM177Q53S58 311 aa9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 BVES-AS1Q5T3Y7 98 aa9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 ETFRF1Q6IPR1 90 aa9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 LYPD2Q6UXB3 125 aa9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 HSPB8Q9UJY1 196 aa9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 TEX15Q9BXT5 2789 aa9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 DSCAML1Q8TD84 2053 aa9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 MAP1AP78559 2803 aaPredicted RBP9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 A0A096LNT2 108 aa9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 C19orf71A6NCJ1 209 aa9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 SRRM4A7MD48 611 aaKnown RBP9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 C22orf46C9J442 243 aa9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 TAX1BP3O14907 124 aa9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 HIST1H1AQ02539 215 aaPredicted RBP9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 LOXL1Q08397 574 aaPredicted RBP9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 TMEM155Q4W5P6 130 aa9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 TEX36Q5VZQ5 186 aa9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 SMIM15Q7Z3B0 74 aa9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 MOB3BQ86TA1 216 aa9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 PDPNQ86YL7 162 aa9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 GATD1Q8NB37 220 aa9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 TMEM167AQ8TBQ9 72 aa9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 DPF1Q92782 380 aa9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 CCL13Q99616 98 aa9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 MAP1LC3CQ9BXW4 147 aa9.13□□□□□ -0.95
TSPAN1-201ENST00000372003 OTOGQ6ZRI0 2925 aa9.12□□□□□ -0.95
TSPAN1-201ENST00000372003 TRAV5A0A0B4J249 113 aa9.12□□□□□ -0.95
TSPAN1-201ENST00000372003 TRBV6-1A0A0K0K1D8 114 aa9.12□□□□□ -0.95
TSPAN1-201ENST00000372003 MYOD1P15172 320 aa9.12□□□□□ -0.95
TSPAN1-201ENST00000372003 LMO4P61968 165 aa9.12□□□□□ -0.95
TSPAN1-201ENST00000372003 PAX2Q02962 417 aa9.12□□□□□ -0.95
TSPAN1-201ENST00000372003 MORN5Q5VZ52 161 aa9.12□□□□□ -0.95
TSPAN1-201ENST00000372003 PVRIGQ6DKI7 326 aa9.12□□□□□ -0.95
TSPAN1-201ENST00000372003 PATE2Q6UY27 113 aa9.12□□□□□ -0.95
TSPAN1-201ENST00000372003 RBPMS2Q6ZRY4 209 aaKnown RBP9.12□□□□□ -0.95
TSPAN1-201ENST00000372003 SPATA12Q7Z6I5 190 aa9.12□□□□□ -0.95
TSPAN1-201ENST00000372003 C5orf17Q8NAS9 161 aa9.12□□□□□ -0.95
TSPAN1-201ENST00000372003 OR2T6Q8NHC8 308 aa9.12□□□□□ -0.95
TSPAN1-201ENST00000372003 LINC00479Q96M42 142 aa9.12□□□□□ -0.95
TSPAN1-201ENST00000372003 SCRT2Q9NQ03 307 aa9.12□□□□□ -0.95
TSPAN1-201ENST00000372003 AKAP9Q99996 3911 aa9.12□□□□□ -0.95
TSPAN1-201ENST00000372003 DYSFO75923 2080 aa9.12□□□□□ -0.95
TSPAN1-201ENST00000372003 IGHV1-24A0A0C4DH33 117 aa9.11□□□□□ -0.95
TSPAN1-201ENST00000372003 A0A1B0GW15 77 aa9.11□□□□□ -0.95
TSPAN1-201ENST00000372003 hADV38S2A0JD32 116 aa9.11□□□□□ -0.95
TSPAN1-201ENST00000372003 NPIPB6E9PJ23 425 aa9.11□□□□□ -0.95
TSPAN1-201ENST00000372003 LTAP01374 205 aa9.11□□□□□ -0.95
TSPAN1-201ENST00000372003 IGHV3-7P01780 117 aa9.11□□□□□ -0.95
TSPAN1-201ENST00000372003 CAMPP49913 170 aa9.11□□□□□ -0.95
TSPAN1-201ENST00000372003 FOXA3P55318 350 aaPredicted RBP9.11□□□□□ -0.95
TSPAN1-201ENST00000372003 DUX4L9Q6RFH8 374 aaPredicted RBP9.11□□□□□ -0.95
TSPAN1-201ENST00000372003 C8orf31Q8N9H6 132 aa9.11□□□□□ -0.95
TSPAN1-201ENST00000372003 OR5AN1Q8NGI8 311 aa9.11□□□□□ -0.95
TSPAN1-201ENST00000372003 OR10X1Q8NGY0 326 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms