RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 Q6ZSV7 163 aa20.27■□□□□ 0.84
ATPAF1-202ENST00000371937 PEF1Q9UBV8 284 aaKnown RBP20.27■□□□□ 0.84
ATPAF1-202ENST00000371937 ANK3Q12955 4377 aaKnown RBP20.27■□□□□ 0.84
ATPAF1-202ENST00000371937 SCO2A0A1W2PP80 73 aa20.27■□□□□ 0.84
ATPAF1-202ENST00000371937 HILS1P60008 231 aa20.27■□□□□ 0.84
ATPAF1-202ENST00000371937 PNRC1Q12796 327 aaPredicted RBP20.27■□□□□ 0.84
ATPAF1-202ENST00000371937 METTL26Q96S19 204 aa20.27■□□□□ 0.84
ATPAF1-202ENST00000371937 MTORP42345 2549 aa20.27■□□□□ 0.83
ATPAF1-202ENST00000371937 FLNBO75369 2602 aaKnown RBP20.27■□□□□ 0.83
ATPAF1-202ENST00000371937 IGHV3OR16-8A0A075B7F1 116 aa20.26■□□□□ 0.83
ATPAF1-202ENST00000371937 GGCTO75223 188 aaKnown RBP20.26■□□□□ 0.83
ATPAF1-202ENST00000371937 RPLP1P05386 114 aaKnown RBP20.26■□□□□ 0.83
ATPAF1-202ENST00000371937 RPL7P18124 248 aaKnown RBP20.26■□□□□ 0.83
ATPAF1-202ENST00000371937 RANP62826 216 aaKnown RBP20.26■□□□□ 0.83
ATPAF1-202ENST00000371937 AWAT1Q58HT5 328 aa20.26■□□□□ 0.83
ATPAF1-202ENST00000371937 MYOZ3Q8TDC0 251 aa20.26■□□□□ 0.83
ATPAF1-202ENST00000371937 TCEAL7Q9BRU2 100 aa20.26■□□□□ 0.83
ATPAF1-202ENST00000371937 NAT8Q9UHE5 227 aa20.26■□□□□ 0.83
ATPAF1-202ENST00000371937 SNRPCP09234 159 aaKnown RBP20.25■□□□□ 0.83
ATPAF1-202ENST00000371937 TMEM241Q24JQ0 296 aa20.25■□□□□ 0.83
ATPAF1-202ENST00000371937 JMJD8Q96S16 334 aa20.25■□□□□ 0.83
ATPAF1-202ENST00000371937 CLPSL1A2RUU4 121 aa20.25■□□□□ 0.83
ATPAF1-202ENST00000371937 IGLC2P0DOY2 106 aa20.25■□□□□ 0.83
ATPAF1-202ENST00000371937 RHEBQ15382 184 aa20.25■□□□□ 0.83
ATPAF1-202ENST00000371937 OR8I2Q8N0Y5 310 aa20.25■□□□□ 0.83
ATPAF1-202ENST00000371937 C20orf24Q9BUV8 137 aa20.25■□□□□ 0.83
ATPAF1-202ENST00000371937 ZNF586Q9NXT0 402 aa20.25■□□□□ 0.83
ATPAF1-202ENST00000371937 MRPS12O15235 138 aaKnown RBP20.24■□□□□ 0.83
ATPAF1-202ENST00000371937 KLHDC1Q8N7A1 406 aa20.24■□□□□ 0.83
ATPAF1-202ENST00000371937 UBE2E2Q96LR5 201 aa20.24■□□□□ 0.83
ATPAF1-202ENST00000371937 ELOVL1Q9BW60 279 aa20.24■□□□□ 0.83
ATPAF1-202ENST00000371937 SDF2L1Q9HCN8 221 aa20.24■□□□□ 0.83
ATPAF1-202ENST00000371937 MYCNOSP40205 109 aa20.23■□□□□ 0.83
ATPAF1-202ENST00000371937 TMEM190Q8WZ59 177 aa20.23■□□□□ 0.83
ATPAF1-202ENST00000371937 BUB3O43684 328 aa20.23■□□□□ 0.83
ATPAF1-202ENST00000371937 CRYBB3P26998 211 aa20.23■□□□□ 0.83
ATPAF1-202ENST00000371937 C1orf194Q5T5A4 169 aa20.23■□□□□ 0.83
ATPAF1-202ENST00000371937 GPR82Q96P67 336 aa20.23■□□□□ 0.83
ATPAF1-202ENST00000371937 TRBV19A0A075B6N1 114 aa20.22■□□□□ 0.83
ATPAF1-202ENST00000371937 C7orf77A4D0Y5 90 aa20.22■□□□□ 0.83
ATPAF1-202ENST00000371937 BTN1A1Q13410 526 aa20.22■□□□□ 0.83
ATPAF1-202ENST00000371937 OR5B12Q96R08 314 aa20.22■□□□□ 0.83
ATPAF1-202ENST00000371937 DERL1Q9BUN8 251 aa20.22■□□□□ 0.83
ATPAF1-202ENST00000371937 RPS10P5Q9NQ39 176 aa20.21■□□□□ 0.83
ATPAF1-202ENST00000371937 PGPA6NDG6 321 aa20.2■□□□□ 0.82
ATPAF1-202ENST00000371937 B4DEV8 164 aa20.2■□□□□ 0.82
ATPAF1-202ENST00000371937 H3BTX0 84 aa20.2■□□□□ 0.82
ATPAF1-202ENST00000371937 PDE6HQ13956 83 aa20.2■□□□□ 0.82
ATPAF1-202ENST00000371937 LYPD1Q8N2G4 141 aa20.2■□□□□ 0.82
ATPAF1-202ENST00000371937 Q9H3A6 140 aa20.2■□□□□ 0.82
ATPAF1-202ENST00000371937 OTORQ9NRC9 128 aa20.2■□□□□ 0.82
ATPAF1-202ENST00000371937 LGALS1P09382 135 aaKnown RBP20.2■□□□□ 0.82
ATPAF1-202ENST00000371937 Q71RC1 249 aaPredicted RBP20.2■□□□□ 0.82
ATPAF1-202ENST00000371937 HIST1H2BAQ96A08 127 aa20.2■□□□□ 0.82
ATPAF1-202ENST00000371937 U3KQE9 123 aa20.2■□□□□ 0.82
ATPAF1-202ENST00000371937 FAM106AQ4KMX7 169 aa20.19■□□□□ 0.82
ATPAF1-202ENST00000371937 HELTA6NFD8 242 aa20.18■□□□□ 0.82
ATPAF1-202ENST00000371937 INAFM1C9JVW0 142 aa20.18■□□□□ 0.82
ATPAF1-202ENST00000371937 SLC25A5P05141 298 aaKnown RBP20.18■□□□□ 0.82
ATPAF1-202ENST00000371937 RPL35P42766 123 aaKnown RBP20.18■□□□□ 0.82
ATPAF1-202ENST00000371937 UNQ9165/PRO28630Q6UXU0 137 aa20.18■□□□□ 0.82
ATPAF1-202ENST00000371937 C5orf17Q8NAS9 161 aa20.18■□□□□ 0.82
ATPAF1-202ENST00000371937 C2CD4CQ8TF44 421 aa20.18■□□□□ 0.82
ATPAF1-202ENST00000371937 ZNF207O43670 478 aaKnown RBP20.18■□□□□ 0.82
ATPAF1-202ENST00000371937 GPHB5Q86YW7 130 aa20.18■□□□□ 0.82
ATPAF1-202ENST00000371937 C16orf95Q9H693 158 aa20.18■□□□□ 0.82
ATPAF1-202ENST00000371937 EPDR1Q9UM22 224 aa20.18■□□□□ 0.82
ATPAF1-202ENST00000371937 ZNF320A2RRD8 509 aa20.17■□□□□ 0.82
ATPAF1-202ENST00000371937 ATF4P18848 351 aaPredicted RBP20.17■□□□□ 0.82
ATPAF1-202ENST00000371937 PEX7O00628 323 aa20.16■□□□□ 0.82
ATPAF1-202ENST00000371937 GALR1P47211 349 aa20.16■□□□□ 0.82
ATPAF1-202ENST00000371937 ADIRFQ15847 76 aa20.16■□□□□ 0.82
ATPAF1-202ENST00000371937 C17orf77Q96MU5 243 aa20.16■□□□□ 0.82
ATPAF1-202ENST00000371937 HIVEP1P15822 2718 aa20.16■□□□□ 0.82
ATPAF1-202ENST00000371937 C9JCJ5 164 aa20.16■□□□□ 0.82
ATPAF1-202ENST00000371937 AKR1C3P42330 323 aa20.16■□□□□ 0.82
ATPAF1-202ENST00000371937 RPL23P62829 140 aaKnown RBP20.16■□□□□ 0.82
ATPAF1-202ENST00000371937 RPEL1Q2QD12 228 aa20.16■□□□□ 0.82
ATPAF1-202ENST00000371937 APOHP02749 345 aaPredicted RBP20.15■□□□□ 0.82
ATPAF1-202ENST00000371937 CDX1P47902 265 aaPredicted RBP20.15■□□□□ 0.82
ATPAF1-202ENST00000371937 CNN1P51911 297 aaKnown RBP20.15■□□□□ 0.82
ATPAF1-202ENST00000371937 PSG9Q00887 426 aa20.15■□□□□ 0.82
ATPAF1-202ENST00000371937 SIGLEC15Q6ZMC9 328 aa20.15■□□□□ 0.82
ATPAF1-202ENST00000371937 CMTM2Q8TAZ6 248 aa20.15■□□□□ 0.82
ATPAF1-202ENST00000371937 A0A087WWC5 75 aa20.14■□□□□ 0.81
ATPAF1-202ENST00000371937 DNASE2O00115 360 aaPredicted RBP20.14■□□□□ 0.81
ATPAF1-202ENST00000371937 ZNF253O75346 499 aa20.14■□□□□ 0.81
ATPAF1-202ENST00000371937 TMEM88Q6PEY1 159 aa20.14■□□□□ 0.81
ATPAF1-202ENST00000371937 AAMDCQ9H7C9 122 aa20.14■□□□□ 0.81
ATPAF1-202ENST00000371937 DAZ1Q9NQZ3 744 aaKnown RBP20.14■□□□□ 0.81
ATPAF1-202ENST00000371937 SMAD5-AS1Q9Y6J3 95 aa20.14■□□□□ 0.81
ATPAF1-202ENST00000371937 TRBV20OR9-2A0A075B6H5 130 aa20.13■□□□□ 0.81
ATPAF1-202ENST00000371937 IGHV3-66A0A0C4DH42 116 aa20.13■□□□□ 0.81
ATPAF1-202ENST00000371937 A0A1W2PS18 150 aa20.13■□□□□ 0.81
ATPAF1-202ENST00000371937 K7EMT4 169 aa20.13■□□□□ 0.81
ATPAF1-202ENST00000371937 EXOC3-AS1Q8N2X6 119 aa20.13■□□□□ 0.81
ATPAF1-202ENST00000371937 GRAMD2BQ96HH9 432 aa20.13■□□□□ 0.81
ATPAF1-202ENST00000371937 ATG101Q9BSB4 218 aa20.13■□□□□ 0.81
ATPAF1-202ENST00000371937 SMCO4Q9NRQ5 59 aa20.13■□□□□ 0.81
ATPAF1-202ENST00000371937 PRELID1Q9Y255 219 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms