RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 SAA2-SAA4A0A096LPE2 208 aa12.66□□□□□ -0.38
COL5A1-201ENST00000371817 TRAV12-1A0A0B4J245 112 aa12.66□□□□□ -0.38
COL5A1-201ENST00000371817 DUSP14O95147 198 aaKnown RBP12.66□□□□□ -0.38
COL5A1-201ENST00000371817 SAA2P0DJI9 122 aaPredicted RBP12.66□□□□□ -0.38
COL5A1-201ENST00000371817 CCL21O00585 134 aa12.66□□□□□ -0.38
COL5A1-201ENST00000371817 GFRA4Q9GZZ7 299 aa12.66□□□□□ -0.38
COL5A1-201ENST00000371817 AHDC1Q5TGY3 1603 aaPredicted RBP12.66□□□□□ -0.38
COL5A1-201ENST00000371817 MMP23AO75900 390 aa12.66□□□□□ -0.38
COL5A1-201ENST00000371817 BVES-AS1Q5T3Y7 98 aa12.66□□□□□ -0.38
COL5A1-201ENST00000371817 ZNF497Q6ZNH5 498 aa12.66□□□□□ -0.38
COL5A1-201ENST00000371817 IGHV2-26A0A0B4J1V2 119 aa12.66□□□□□ -0.38
COL5A1-201ENST00000371817 EXOC3-AS1Q8N2X6 119 aa12.66□□□□□ -0.38
COL5A1-201ENST00000371817 FNDC10F2Z333 226 aa12.66□□□□□ -0.38
COL5A1-201ENST00000371817 TMEM240Q5SV17 173 aa12.66□□□□□ -0.38
COL5A1-201ENST00000371817 TREML4Q6UXN2 200 aa12.66□□□□□ -0.38
COL5A1-201ENST00000371817 BRCA1P38398 1863 aaKnown RBP12.66□□□□□ -0.38
COL5A1-201ENST00000371817 ADCYAP1P18509 176 aa12.66□□□□□ -0.38
COL5A1-201ENST00000371817 WBP1LQ9NX94 342 aa12.66□□□□□ -0.38
COL5A1-201ENST00000371817 SIGLEC15Q6ZMC9 328 aa12.65□□□□□ -0.38
COL5A1-201ENST00000371817 PRCDQ00LT1 54 aa12.65□□□□□ -0.38
COL5A1-201ENST00000371817 ZNF876PQ49A33 203 aa12.65□□□□□ -0.38
COL5A1-201ENST00000371817 RPP25LQ8N5L8 163 aaKnown RBP12.65□□□□□ -0.38
COL5A1-201ENST00000371817 PTPRQQ9UMZ3 2332 aa12.65□□□□□ -0.38
COL5A1-201ENST00000371817 IGHV1-45A0A0A0MS14 117 aa12.65□□□□□ -0.38
COL5A1-201ENST00000371817 PMS2P5A8MQ11 134 aa12.65□□□□□ -0.38
COL5A1-201ENST00000371817 FOXC1Q12948 553 aa12.65□□□□□ -0.38
COL5A1-201ENST00000371817 ZNF474Q6S9Z5 364 aaPredicted RBP12.65□□□□□ -0.38
COL5A1-201ENST00000371817 IGKV2-40A0A087WW87 121 aaPredicted RBP12.65□□□□□ -0.38
COL5A1-201ENST00000371817 IGKV2D-40P01614 121 aaPredicted RBP12.65□□□□□ -0.38
COL5A1-201ENST00000371817 PRSS57Q6UWY2 283 aa12.65□□□□□ -0.38
COL5A1-201ENST00000371817 IGKV1D-13A0A0B4J2D9 117 aa12.64□□□□□ -0.39
COL5A1-201ENST00000371817 FOXH1O75593 365 aa12.64□□□□□ -0.39
COL5A1-201ENST00000371817 CELA3AP09093 270 aa12.64□□□□□ -0.39
COL5A1-201ENST00000371817 IGKV1-13P0DP09 117 aa12.64□□□□□ -0.39
COL5A1-201ENST00000371817 FAM90A1Q86YD7 464 aa12.64□□□□□ -0.39
COL5A1-201ENST00000371817 EXPH5Q8NEV8 1989 aa12.64□□□□□ -0.39
COL5A1-201ENST00000371817 OVOL1O14753 267 aa12.64□□□□□ -0.39
COL5A1-201ENST00000371817 LY6G5BQ8NDX9 201 aa12.64□□□□□ -0.39
COL5A1-201ENST00000371817 FDCSPQ8NFU4 85 aa12.64□□□□□ -0.39
COL5A1-201ENST00000371817 PEMTQ9UBM1 199 aa12.64□□□□□ -0.39
COL5A1-201ENST00000371817 WDR83OSQ9Y284 106 aa12.64□□□□□ -0.39
COL5A1-201ENST00000371817 ADAMTSL1Q8N6G6 1762 aa12.64□□□□□ -0.39
COL5A1-201ENST00000371817 PAPPAQ13219 1627 aa12.64□□□□□ -0.39
COL5A1-201ENST00000371817 BMPERQ8N8U9 685 aa12.64□□□□□ -0.39
COL5A1-201ENST00000371817 LOC102723996A0A087X1L8 192 aa12.64□□□□□ -0.39
COL5A1-201ENST00000371817 TMEM92Q6UXU6 159 aa12.64□□□□□ -0.39
COL5A1-201ENST00000371817 SIGLEC12Q96PQ1 595 aa12.64□□□□□ -0.39
COL5A1-201ENST00000371817 A0A1W2PR77 199 aa12.64□□□□□ -0.39
COL5A1-201ENST00000371817 TRIP6Q15654 476 aaKnown RBP12.64□□□□□ -0.39
COL5A1-201ENST00000371817 HTN3P15516 51 aa12.63□□□□□ -0.39
COL5A1-201ENST00000371817 SSC4DQ8WTU2 575 aa12.63□□□□□ -0.39
COL5A1-201ENST00000371817 SRXN1Q9BYN0 137 aa12.63□□□□□ -0.39
COL5A1-201ENST00000371817 R3HDMLQ9H3Y0 253 aa12.63□□□□□ -0.39
COL5A1-201ENST00000371817 LINC00312Q9Y6C7 94 aa12.63□□□□□ -0.39
COL5A1-201ENST00000371817 CCL4P13236 92 aa12.63□□□□□ -0.39
COL5A1-201ENST00000371817 TMEM243Q9BU79 118 aa12.63□□□□□ -0.39
COL5A1-201ENST00000371817 PRB3Q04118 309 aaPredicted RBP12.63□□□□□ -0.39
COL5A1-201ENST00000371817 NBR2O15453 112 aa12.63□□□□□ -0.39
COL5A1-201ENST00000371817 CARD19Q96LW7 228 aa12.63□□□□□ -0.39
COL5A1-201ENST00000371817 ACYP1P07311 99 aa12.63□□□□□ -0.39
COL5A1-201ENST00000371817 LINC00271P0C7V0 271 aa12.63□□□□□ -0.39
COL5A1-201ENST00000371817 OR11H6Q8NGC7 330 aa12.62□□□□□ -0.39
COL5A1-201ENST00000371817 BRK1Q8WUW1 75 aa12.62□□□□□ -0.39
COL5A1-201ENST00000371817 CXCL10P02778 98 aa12.62□□□□□ -0.39
COL5A1-201ENST00000371817 A0A087WX48 190 aa12.62□□□□□ -0.39
COL5A1-201ENST00000371817 hADV29S1A0JD25 119 aa12.62□□□□□ -0.39
COL5A1-201ENST00000371817 ATOX1O00244 68 aa12.62□□□□□ -0.39
COL5A1-201ENST00000371817 FBLN5Q9UBX5 448 aa12.62□□□□□ -0.39
COL5A1-201ENST00000371817 KNCNA6PVL3 124 aa12.62□□□□□ -0.39
COL5A1-201ENST00000371817 MORN2Q502X0 79 aa12.62□□□□□ -0.39
COL5A1-201ENST00000371817 TCF20Q9UGU0 1960 aaKnown RBP12.62□□□□□ -0.39
COL5A1-201ENST00000371817 Q6ZWC4 215 aa12.62□□□□□ -0.39
COL5A1-201ENST00000371817 C1QTNF5Q9BXJ0 243 aa12.62□□□□□ -0.39
COL5A1-201ENST00000371817 FHL5Q5TD97 284 aa12.61□□□□□ -0.39
COL5A1-201ENST00000371817 C18orf32Q8TCD1 76 aa12.61□□□□□ -0.39
COL5A1-201ENST00000371817 IL9P15248 144 aa12.61□□□□□ -0.39
COL5A1-201ENST00000371817 IGHV2-5P01817 119 aa12.61□□□□□ -0.39
COL5A1-201ENST00000371817 SH2D1AO60880 128 aa12.61□□□□□ -0.39
COL5A1-201ENST00000371817 ZIC4Q8N9L1 334 aa12.61□□□□□ -0.39
COL5A1-201ENST00000371817 SMKR1H3BMG3 65 aa12.61□□□□□ -0.39
COL5A1-201ENST00000371817 FOXG1P55316 489 aaPredicted RBP12.61□□□□□ -0.39
COL5A1-201ENST00000371817 TNRC6BQ9UPQ9 1833 aaKnown RBP12.61□□□□□ -0.39
COL5A1-201ENST00000371817 HAPLN4Q86UW8 402 aa12.61□□□□□ -0.39
COL5A1-201ENST00000371817 PLA2G2FQ9BZM2 168 aa12.61□□□□□ -0.39
COL5A1-201ENST00000371817 K7ERJ3 54 aa12.6□□□□□ -0.39
COL5A1-201ENST00000371817 SIVA1O15304 175 aa12.6□□□□□ -0.39
COL5A1-201ENST00000371817 EFEMP2O95967 443 aa12.6□□□□□ -0.39
COL5A1-201ENST00000371817 CEACAM8P31997 349 aaPredicted RBP12.6□□□□□ -0.39
COL5A1-201ENST00000371817 PDLIM4P50479 330 aa12.6□□□□□ -0.39
COL5A1-201ENST00000371817 B9A039 149 aa12.6□□□□□ -0.39
COL5A1-201ENST00000371817 APOBEC3AP31941 199 aaPredicted RBP12.6□□□□□ -0.39
COL5A1-201ENST00000371817 SRSF7Q16629 238 aaKnown RBP eCLIP12.6□□□□□ -0.39
COL5A1-201ENST00000371817 ADAMTSL3P82987 1691 aa12.6□□□□□ -0.39
COL5A1-201ENST00000371817 REPIN1Q9BWE0 567 aaKnown RBP12.6□□□□□ -0.39
COL5A1-201ENST00000371817 IGHV2OR16-5A0A0B4J2B6 119 aa12.6□□□□□ -0.39
COL5A1-201ENST00000371817 SHISA9B4DS77 424 aa12.6□□□□□ -0.39
COL5A1-201ENST00000371817 LINC01565O15544 149 aa12.6□□□□□ -0.39
COL5A1-201ENST00000371817 MST1P26927 711 aa12.6□□□□□ -0.39
COL5A1-201ENST00000371817 RPL36AP83881 106 aaKnown RBP12.6□□□□□ -0.39
COL5A1-201ENST00000371817 RPL36ALQ969Q0 106 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms