RNA–Protein interactions for RNA: ENST00000371648.4

EDF1-202, Transcript of endothelial differentiation related factor 1, humanhuman

TSL 1 (best) BASIC

Gene EDF1, Length 809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-202ENST00000371648 Q6ZWC4 215 aa10.65□□□□□ -0.7
EDF1-202ENST00000371648 GPR82Q96P67 336 aa10.65□□□□□ -0.7
EDF1-202ENST00000371648 MGST2Q99735 147 aa10.65□□□□□ -0.7
EDF1-202ENST00000371648 SCRT1Q9BWW7 348 aa10.65□□□□□ -0.7
EDF1-202ENST00000371648 SLC25A32Q9H2D1 315 aa10.65□□□□□ -0.7
EDF1-202ENST00000371648 RNF24Q9Y225 148 aa10.65□□□□□ -0.7
EDF1-202ENST00000371648 HYDINQ4G0P3 5121 aa10.65□□□□□ -0.71
EDF1-202ENST00000371648 H0YIZ8 118 aa10.64□□□□□ -0.71
EDF1-202ENST00000371648 COX7A2P2O60397 106 aa10.64□□□□□ -0.71
EDF1-202ENST00000371648 MPC2O95563 127 aa10.64□□□□□ -0.71
EDF1-202ENST00000371648 ATF4P18848 351 aaPredicted RBP10.64□□□□□ -0.71
EDF1-202ENST00000371648 PLP1P60201 277 aa10.64□□□□□ -0.71
EDF1-202ENST00000371648 EWSR1Q01844 656 aaKnown RBP eCLIP10.64□□□□□ -0.711e-6■■□□□ 12.2
EDF1-202ENST00000371648 FGL1Q08830 312 aa10.64□□□□□ -0.71
EDF1-202ENST00000371648 OR5C1Q8NGR4 320 aa10.64□□□□□ -0.71
EDF1-202ENST00000371648 C16orf92Q96LL3 132 aa10.64□□□□□ -0.71
EDF1-202ENST00000371648 UHRF2Q96PU4 802 aa10.64□□□□□ -0.71
EDF1-202ENST00000371648 OVOL2Q9BRP0 275 aa10.64□□□□□ -0.71
EDF1-202ENST00000371648 SHANK2-AS3Q9BTD1 123 aa10.64□□□□□ -0.71
EDF1-202ENST00000371648 ARV1Q9H2C2 271 aa10.64□□□□□ -0.71
EDF1-202ENST00000371648 SEPSECSQ9HD40 501 aaKnown RBP10.64□□□□□ -0.71
EDF1-202ENST00000371648 WDR83OSQ9Y284 106 aa10.64□□□□□ -0.71
EDF1-202ENST00000371648 AGRNO00468 2067 aa10.63□□□□□ -0.71
EDF1-202ENST00000371648 RPL7P18124 248 aaKnown RBP10.63□□□□□ -0.71
EDF1-202ENST00000371648 FGF7P21781 194 aa10.63□□□□□ -0.71
EDF1-202ENST00000371648 MEOX2P50222 304 aa10.63□□□□□ -0.71
EDF1-202ENST00000371648 VWC2Q2TAL6 325 aa10.63□□□□□ -0.71
EDF1-202ENST00000371648 MIC13Q5XKP0 118 aa10.63□□□□□ -0.71
EDF1-202ENST00000371648 THAP6Q8TBB0 222 aa10.63□□□□□ -0.71
EDF1-202ENST00000371648 RNF126Q9BV68 326 aa10.63□□□□□ -0.71
EDF1-202ENST00000371648 DNAJC4Q9NNZ3 241 aa10.63□□□□□ -0.71
EDF1-202ENST00000371648 ELOA3CA0A087WX78 387 aaPredicted RBP10.62□□□□□ -0.71
EDF1-202ENST00000371648 H3BRN7 92 aa10.62□□□□□ -0.71
EDF1-202ENST00000371648 CA1P00915 261 aaPredicted RBP10.62□□□□□ -0.71
EDF1-202ENST00000371648 CXCL3P19876 107 aa10.62□□□□□ -0.71
EDF1-202ENST00000371648 PSMB3P49720 205 aa10.62□□□□□ -0.71
EDF1-202ENST00000371648 CLINT1Q14677 625 aa10.62□□□□□ -0.71
EDF1-202ENST00000371648 SAMD13Q5VXD3 122 aa10.62□□□□□ -0.71
EDF1-202ENST00000371648 C10orf113Q5VZT2 155 aa10.62□□□□□ -0.71
EDF1-202ENST00000371648 PATE2Q6UY27 113 aa10.62□□□□□ -0.71
EDF1-202ENST00000371648 LINC00305Q7Z4B0 112 aa10.62□□□□□ -0.71
EDF1-202ENST00000371648 LRRC20Q8TCA0 184 aa10.62□□□□□ -0.71
EDF1-202ENST00000371648 ISLRO14498 428 aa10.61□□□□□ -0.71
EDF1-202ENST00000371648 MPDU1O75352 247 aa10.61□□□□□ -0.71
EDF1-202ENST00000371648 RPL12P30050 165 aaKnown RBP10.61□□□□□ -0.71
EDF1-202ENST00000371648 FCN2Q15485 313 aa10.61□□□□□ -0.71
EDF1-202ENST00000371648 ZNF709Q8N972 641 aa10.61□□□□□ -0.71
EDF1-202ENST00000371648 OR1L4Q8NGR5 311 aa10.61□□□□□ -0.71
EDF1-202ENST00000371648 RNF183Q96D59 192 aa10.61□□□□□ -0.71
EDF1-202ENST00000371648 SLC39A9Q9NUM3 307 aa10.61□□□□□ -0.71
EDF1-202ENST00000371648 MBD2Q9UBB5 411 aa10.61□□□□□ -0.71
EDF1-202ENST00000371648 TP53TG1Q9Y2A0 90 aa10.61□□□□□ -0.71
EDF1-202ENST00000371648 RPL29P47914 159 aaKnown RBP10.6□□□□□ -0.71
EDF1-202ENST00000371648 B2MP61769 119 aa10.6□□□□□ -0.71
EDF1-202ENST00000371648 NUTF2P61970 127 aaKnown RBP10.6□□□□□ -0.71
EDF1-202ENST00000371648 EBLN2Q6P2I7 272 aa10.6□□□□□ -0.71
EDF1-202ENST00000371648 MORN3Q6PF18 240 aaPredicted RBP10.6□□□□□ -0.71
EDF1-202ENST00000371648 TRPT1Q86TN4 253 aaKnown RBP10.6□□□□□ -0.71
EDF1-202ENST00000371648 OR11H7Q8NGC8 314 aa10.6□□□□□ -0.71
EDF1-202ENST00000371648 TMEM37Q8WXS4 190 aa10.6□□□□□ -0.71
EDF1-202ENST00000371648 PFDN5Q99471 154 aa10.6□□□□□ -0.71
EDF1-202ENST00000371648 RPRMQ9NS64 109 aa10.6□□□□□ -0.71
EDF1-202ENST00000371648 PXMP4Q9Y6I8 212 aa10.6□□□□□ -0.71
EDF1-202ENST00000371648 IGKV3-20P01619 116 aa10.59□□□□□ -0.71
EDF1-202ENST00000371648 SPP1P10451 314 aa10.59□□□□□ -0.71
EDF1-202ENST00000371648 PRR20EP86478 221 aa10.59□□□□□ -0.71
EDF1-202ENST00000371648 PRR20CP86479 221 aa10.59□□□□□ -0.71
EDF1-202ENST00000371648 PRR20DP86480 221 aa10.59□□□□□ -0.71
EDF1-202ENST00000371648 PRR20BP86481 221 aa10.59□□□□□ -0.71
EDF1-202ENST00000371648 PRR20AP86496 221 aa10.59□□□□□ -0.71
EDF1-202ENST00000371648 OPCMLQ14982 345 aa10.59□□□□□ -0.71
EDF1-202ENST00000371648 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.59□□□□□ -0.71
EDF1-202ENST00000371648 OR4B1Q8NGF8 309 aa10.59□□□□□ -0.71
EDF1-202ENST00000371648 SCGB1C1Q8TD33 95 aa10.59□□□□□ -0.71
EDF1-202ENST00000371648 RARRES2Q99969 163 aa10.59□□□□□ -0.71
EDF1-202ENST00000371648 SMIM3Q9BZL3 60 aa10.59□□□□□ -0.71
EDF1-202ENST00000371648 HSPB11Q9Y547 144 aa10.59□□□□□ -0.71
EDF1-202ENST00000371648 ALMS1Q8TCU4 4167 aa10.58□□□□□ -0.72
EDF1-202ENST00000371648 H3BMM0 161 aa10.58□□□□□ -0.72
EDF1-202ENST00000371648 SOCS3O14543 225 aa10.58□□□□□ -0.72
EDF1-202ENST00000371648 IFNA5P01569 189 aa10.58□□□□□ -0.72
EDF1-202ENST00000371648 DEFB1P60022 68 aa10.58□□□□□ -0.72
EDF1-202ENST00000371648 IGFL4Q6B9Z1 124 aa10.58□□□□□ -0.72
EDF1-202ENST00000371648 BPIFA4PQ86YQ2 179 aa10.58□□□□□ -0.72
EDF1-202ENST00000371648 OR11H2Q8NH07 326 aa10.58□□□□□ -0.72
EDF1-202ENST00000371648 GATAD1Q8WUU5 269 aa10.58□□□□□ -0.72
EDF1-202ENST00000371648 CHAC2Q8WUX2 184 aa10.58□□□□□ -0.72
EDF1-202ENST00000371648 NPCDR1Q9BY65 106 aa10.58□□□□□ -0.72
EDF1-202ENST00000371648 C17orf112F2Z3M2 114 aa10.57□□□□□ -0.72
EDF1-202ENST00000371648 SNRPCP09234 159 aaKnown RBP10.57□□□□□ -0.72
EDF1-202ENST00000371648 HLA-DRB4P13762 266 aa10.57□□□□□ -0.72
EDF1-202ENST00000371648 PMS2P11Q13670 270 aa10.57□□□□□ -0.72
EDF1-202ENST00000371648 TMEM41BQ5BJD5 291 aa10.57□□□□□ -0.72
EDF1-202ENST00000371648 GDF5OSQ5U4N7 250 aa10.57□□□□□ -0.72
EDF1-202ENST00000371648 FOXI2Q6ZQN5 318 aa10.57□□□□□ -0.72
EDF1-202ENST00000371648 ATP5SQ99766 215 aa10.57□□□□□ -0.72
EDF1-202ENST00000371648 SAV1Q9H4B6 383 aaPredicted RBP10.57□□□□□ -0.72
EDF1-202ENST00000371648 HLA-DRB4X5D2U9 266 aa10.57□□□□□ -0.72
EDF1-202ENST00000371648 TRAV5A0A0B4J249 113 aa10.56□□□□□ -0.72
EDF1-202ENST00000371648 A0A0J9YWU9 116 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms