RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 UHRF2Q96PU4 802 aa11.67□□□□□ -0.54
PRPF38B-202ENST00000370022 AURKAIP1Q9NWT8 199 aaPredicted RBP11.67□□□□□ -0.54
PRPF38B-202ENST00000370022 SELENOKQ9Y6D0 94 aa11.67□□□□□ -0.54
PRPF38B-202ENST00000370022 RPL7P18124 248 aaKnown RBP11.66□□□□□ -0.54
PRPF38B-202ENST00000370022 RPL7L1Q6DKI1 246 aaKnown RBP11.66□□□□□ -0.54
PRPF38B-202ENST00000370022 GNPNAT1Q96EK6 184 aaPredicted RBP11.66□□□□□ -0.54
PRPF38B-202ENST00000370022 PRR25Q96S07 402 aa11.66□□□□□ -0.54
PRPF38B-202ENST00000370022 PSMG3Q9BT73 122 aaPredicted RBP11.66□□□□□ -0.54
PRPF38B-202ENST00000370022 SCRT1Q9BWW7 348 aa11.66□□□□□ -0.54
PRPF38B-202ENST00000370022 MS4A6AQ9H2W1 248 aa11.66□□□□□ -0.54
PRPF38B-202ENST00000370022 SLC25A22Q9H936 323 aa11.66□□□□□ -0.54
PRPF38B-202ENST00000370022 KANTRA0A1W2PQU2 76 aa11.65□□□□□ -0.54
PRPF38B-202ENST00000370022 CXCL2P19875 107 aa11.65□□□□□ -0.54
PRPF38B-202ENST00000370022 GALR1P47211 349 aa11.65□□□□□ -0.54
PRPF38B-202ENST00000370022 HSD17B11Q8NBQ5 300 aa11.65□□□□□ -0.54
PRPF38B-202ENST00000370022 OR2G3Q8NGZ4 309 aa11.65□□□□□ -0.54
PRPF38B-202ENST00000370022 NRN1Q9NPD7 142 aa11.65□□□□□ -0.54
PRPF38B-202ENST00000370022 IGKV3-7A0A075B6H7 116 aa11.64□□□□□ -0.55
PRPF38B-202ENST00000370022 DNASE2O00115 360 aaPredicted RBP11.64□□□□□ -0.55
PRPF38B-202ENST00000370022 BCL2L11O43521 198 aa11.64□□□□□ -0.55
PRPF38B-202ENST00000370022 ATP6V0CP27449 155 aa11.64□□□□□ -0.55
PRPF38B-202ENST00000370022 CMC4P56277 68 aaPredicted RBP11.64□□□□□ -0.55
PRPF38B-202ENST00000370022 SERF2P84101 59 aa11.64□□□□□ -0.55
PRPF38B-202ENST00000370022 ZFP69Q49AA0 526 aa11.64□□□□□ -0.55
PRPF38B-202ENST00000370022 FFAR4Q5NUL3 377 aa11.64□□□□□ -0.55
PRPF38B-202ENST00000370022 SAMD13Q5VXD3 122 aa11.64□□□□□ -0.55
PRPF38B-202ENST00000370022 STXBP6Q8NFX7 210 aa11.64□□□□□ -0.55
PRPF38B-202ENST00000370022 CYTL1Q9NRR1 136 aa11.64□□□□□ -0.55
PRPF38B-202ENST00000370022 CD81P60033 236 aa11.63□□□□□ -0.55
PRPF38B-202ENST00000370022 LEMD1Q68G75 181 aa11.63□□□□□ -0.55
PRPF38B-202ENST00000370022 FAM110AQ9BQ89 295 aa11.63□□□□□ -0.55
PRPF38B-202ENST00000370022 MRPL32Q9BYC8 188 aaKnown RBP11.63□□□□□ -0.55
PRPF38B-202ENST00000370022 SLC25A32Q9H2D1 315 aa11.63□□□□□ -0.55
PRPF38B-202ENST00000370022 MBP02144 154 aa11.62□□□□□ -0.55
PRPF38B-202ENST00000370022 MEOX2P50222 304 aa11.62□□□□□ -0.55
PRPF38B-202ENST00000370022 EIF5AP63241 154 aaKnown RBP11.62□□□□□ -0.55
PRPF38B-202ENST00000370022 S100A12P80511 92 aa11.62□□□□□ -0.55
PRPF38B-202ENST00000370022 DEFA6Q01524 100 aa11.62□□□□□ -0.55
PRPF38B-202ENST00000370022 ACOT6Q3I5F7 207 aaPredicted RBP11.62□□□□□ -0.55
PRPF38B-202ENST00000370022 TMUB2Q71RG4 321 aa11.62□□□□□ -0.55
PRPF38B-202ENST00000370022 BPIFA4PQ86YQ2 179 aa11.62□□□□□ -0.55
PRPF38B-202ENST00000370022 GBGT1Q8N5D6 347 aa11.62□□□□□ -0.55
PRPF38B-202ENST00000370022 DCANP1Q8TF63 244 aa11.62□□□□□ -0.55
PRPF38B-202ENST00000370022 SEPSECSQ9HD40 501 aaKnown RBP11.62□□□□□ -0.55
PRPF38B-202ENST00000370022 K7EQG2 157 aa11.62□□□□□ -0.55
PRPF38B-202ENST00000370022 PRB2P02812 416 aaPredicted RBP11.62□□□□□ -0.55
PRPF38B-202ENST00000370022 TFPI2P48307 235 aa11.62□□□□□ -0.55
PRPF38B-202ENST00000370022 GCSAMLQ5JQS6 135 aa11.62□□□□□ -0.55
PRPF38B-202ENST00000370022 FAM78BQ5VT40 261 aa11.62□□□□□ -0.55
PRPF38B-202ENST00000370022 Q8N1Y9 231 aa11.62□□□□□ -0.55
PRPF38B-202ENST00000370022 CD7P09564 240 aa11.61□□□□□ -0.55
PRPF38B-202ENST00000370022 ATF4P18848 351 aaPredicted RBP11.61□□□□□ -0.55
PRPF38B-202ENST00000370022 C4BPBP20851 252 aa11.61□□□□□ -0.55
PRPF38B-202ENST00000370022 RHOBP62745 196 aa11.61□□□□□ -0.55
PRPF38B-202ENST00000370022 LGALSLQ3ZCW2 172 aaPredicted RBP11.61□□□□□ -0.55
PRPF38B-202ENST00000370022 WFDC3Q8IUB2 231 aa11.61□□□□□ -0.55
PRPF38B-202ENST00000370022 ZNF471Q9BX82 626 aaPredicted RBP11.61□□□□□ -0.55
PRPF38B-202ENST00000370022 FUT9Q9Y231 359 aa11.61□□□□□ -0.55
PRPF38B-202ENST00000370022 SORL1Q92673 2214 aa11.6□□□□□ -0.55
PRPF38B-202ENST00000370022 K7EIL1 84 aa11.6□□□□□ -0.55
PRPF38B-202ENST00000370022 SNRPD3P62318 126 aaKnown RBP11.6□□□□□ -0.55
PRPF38B-202ENST00000370022 MORN5Q5VZ52 161 aa11.6□□□□□ -0.55
PRPF38B-202ENST00000370022 SH3BGRL3Q9H299 93 aa11.6□□□□□ -0.55
PRPF38B-202ENST00000370022 TMEM14CQ9P0S9 112 aa11.6□□□□□ -0.55
PRPF38B-202ENST00000370022 SMAD5-AS1Q9Y6J3 95 aa11.6□□□□□ -0.55
PRPF38B-202ENST00000370022 NOTCH1P46531 2555 aa11.6□□□□□ -0.55
PRPF38B-202ENST00000370022 A0A087X0K7 114 aa11.59□□□□□ -0.55
PRPF38B-202ENST00000370022 OR11H12B2RN74 326 aa11.59□□□□□ -0.55
PRPF38B-202ENST00000370022 MRPS12O15235 138 aaKnown RBP11.59□□□□□ -0.55
PRPF38B-202ENST00000370022 RFNGQ9Y644 331 aa11.59□□□□□ -0.55
PRPF38B-202ENST00000370022 MEGF8Q7Z7M0 2845 aa11.59□□□□□ -0.55
PRPF38B-202ENST00000370022 A8MZ25 164 aa11.58□□□□□ -0.55
PRPF38B-202ENST00000370022 ISLRO14498 428 aa11.58□□□□□ -0.55
PRPF38B-202ENST00000370022 S100A6P06703 90 aa11.58□□□□□ -0.55
PRPF38B-202ENST00000370022 SPP1P10451 314 aa11.58□□□□□ -0.55
PRPF38B-202ENST00000370022 ID1P41134 155 aa11.58□□□□□ -0.55
PRPF38B-202ENST00000370022 TAS2R45P59539 299 aa11.58□□□□□ -0.55
PRPF38B-202ENST00000370022 ODF3L2Q3SX64 289 aa11.58□□□□□ -0.55
PRPF38B-202ENST00000370022 C9orf62Q8N4C0 152 aa11.58□□□□□ -0.55
PRPF38B-202ENST00000370022 OR10G4Q8NGN3 311 aa11.58□□□□□ -0.55
PRPF38B-202ENST00000370022 OR10G9Q8NGN4 311 aa11.58□□□□□ -0.55
PRPF38B-202ENST00000370022 OR10G7Q8NGN6 311 aa11.58□□□□□ -0.55
PRPF38B-202ENST00000370022 STOML3Q8TAV4 291 aa11.58□□□□□ -0.55
PRPF38B-202ENST00000370022 MRAPQ8TCY5 172 aa11.58□□□□□ -0.55
PRPF38B-202ENST00000370022 C19orf73Q9NVV2 129 aa11.58□□□□□ -0.55
PRPF38B-202ENST00000370022 TRAV5A0A0B4J249 113 aa11.58□□□□□ -0.56
PRPF38B-202ENST00000370022 A0A1W2PPV4 95 aa11.58□□□□□ -0.56
PRPF38B-202ENST00000370022 SOCS3O14543 225 aa11.58□□□□□ -0.56
PRPF38B-202ENST00000370022 SEC11BP0C7V7 166 aa11.58□□□□□ -0.56
PRPF38B-202ENST00000370022 TPT1P13693 172 aaKnown RBP11.58□□□□□ -0.56
PRPF38B-202ENST00000370022 PSMB3P49720 205 aa11.58□□□□□ -0.56
PRPF38B-202ENST00000370022 RAB2AP61019 212 aa11.58□□□□□ -0.56
PRPF38B-202ENST00000370022 GUK1Q16774 197 aa11.58□□□□□ -0.56
PRPF38B-202ENST00000370022 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.58□□□□□ -0.56
PRPF38B-202ENST00000370022 ZNF767PQ75MW2 155 aa11.58□□□□□ -0.56
PRPF38B-202ENST00000370022 MIR17HGQ75NE6 70 aa11.58□□□□□ -0.56
PRPF38B-202ENST00000370022 BAP18Q8IXM2 172 aa11.58□□□□□ -0.56
PRPF38B-202ENST00000370022 SLC25A2Q9BXI2 301 aa11.58□□□□□ -0.56
PRPF38B-202ENST00000370022 HRH4Q9H3N8 390 aa11.58□□□□□ -0.56
PRPF38B-202ENST00000370022 MAP6D1Q9H9H5 199 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms