RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 TCRAP04437 139 aa8.41□□□□□ -1.06
PRPF38B-201ENST00000370021 WT1-ASQ06250 92 aa8.41□□□□□ -1.06
PRPF38B-201ENST00000370021 FAM71F2Q6NXP2 309 aa8.41□□□□□ -1.06
PRPF38B-201ENST00000370021 PATE2Q6UY27 113 aa8.41□□□□□ -1.06
PRPF38B-201ENST00000370021 Q71RC1 249 aaPredicted RBP8.41□□□□□ -1.06
PRPF38B-201ENST00000370021 C19orf24Q9BVV8 132 aa8.41□□□□□ -1.06
PRPF38B-201ENST00000370021 LOC107984156A0A0G2JMH3 177 aa8.4□□□□□ -1.06
PRPF38B-201ENST00000370021 TMEM189A5PLL7 270 aa8.4□□□□□ -1.06
PRPF38B-201ENST00000370021 M0R296 226 aa8.4□□□□□ -1.06
PRPF38B-201ENST00000370021 LOXL1Q08397 574 aaPredicted RBP8.4□□□□□ -1.06
PRPF38B-201ENST00000370021 TRIP6Q15654 476 aaKnown RBP8.4□□□□□ -1.06
PRPF38B-201ENST00000370021 ETDBQ3ZM63 59 aa8.4□□□□□ -1.06
PRPF38B-201ENST00000370021 KLF17Q5JT82 389 aaPredicted RBP8.4□□□□□ -1.06
PRPF38B-201ENST00000370021 ARL17AQ8IVW1 177 aa8.4□□□□□ -1.06
PRPF38B-201ENST00000370021 STXBP6Q8NFX7 210 aa8.4□□□□□ -1.06
PRPF38B-201ENST00000370021 CHCHD1Q96BP2 118 aaKnown RBP8.4□□□□□ -1.06
PRPF38B-201ENST00000370021 C17orf77Q96MU5 243 aa8.4□□□□□ -1.06
PRPF38B-201ENST00000370021 CFAP47Q6ZTR5 3102 aa8.4□□□□□ -1.06
PRPF38B-201ENST00000370021 SRRM5B3KS81 715 aa8.4□□□□□ -1.06
PRPF38B-201ENST00000370021 RPL27AP46776 148 aaKnown RBP8.4□□□□□ -1.06
PRPF38B-201ENST00000370021 TMEM249Q2WGJ8 235 aa8.4□□□□□ -1.06
PRPF38B-201ENST00000370021 VSTM2AQ8TAG5 236 aa8.4□□□□□ -1.06
PRPF38B-201ENST00000370021 TNRC18O15417 2968 aaPredicted RBP8.4□□□□□ -1.07
PRPF38B-201ENST00000370021 SPG11Q96JI7 2443 aa8.4□□□□□ -1.07
PRPF38B-201ENST00000370021 IGHV1-18A0A0C4DH31 117 aa8.4□□□□□ -1.07
PRPF38B-201ENST00000370021 TEX48A0A1B0GUV7 120 aa8.4□□□□□ -1.07
PRPF38B-201ENST00000370021 FAM167A-AS1Q96KT0 104 aa8.4□□□□□ -1.07
PRPF38B-201ENST00000370021 C21orf140B9A014 251 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 PRSS46E5RG02 174 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 H3BVH4 76 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 IGLC1P0CG04 106 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 TMPRSS3P57727 454 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 SRSF6Q13247 344 aaKnown RBP8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 DEFB109BQ30KR1 87 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 OR4C13Q8NGP0 309 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 FXYD5Q96DB9 178 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 AAMDCQ9H7C9 122 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 TSSC4Q9Y5U2 329 aaPredicted RBP8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 TMEM265A0A087WTH1 108 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 NPIPB5A8MRT5 1133 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 AZU1P20160 251 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 C2orf83Q53S99 150 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 TDHQ8IZJ6 230 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 HIST1H4GQ99525 98 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 FOXC2Q99958 501 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 FBXL15Q9H469 300 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 DKK2Q9UBU2 259 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 IGHV3-49A0A0A0MS15 119 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 NDUFB3O43676 98 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 IL4P05112 153 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 COX8AP10176 69 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 SEC11AP67812 179 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 RHOGP84095 191 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 C17orf58Q2M2W7 97 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 SH2D6Q7Z4S9 175 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 Q8TAT8 98 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 IFI27L1Q96BM0 104 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 ZNF714Q96N38 554 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 COL25A1Q9BXS0 654 aaPredicted RBP8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 SCRT2Q9NQ03 307 aa8.39□□□□□ -1.07
PRPF38B-201ENST00000370021 IGHV3-66A0A0C4DH42 116 aa8.38□□□□□ -1.07
PRPF38B-201ENST00000370021 A0A1B0GWB2 263 aa8.38□□□□□ -1.07
PRPF38B-201ENST00000370021 CIDEAO60543 219 aa8.38□□□□□ -1.07
PRPF38B-201ENST00000370021 LYZL1Q6UWQ5 148 aa8.38□□□□□ -1.07
PRPF38B-201ENST00000370021 ZNF418Q8TF45 676 aaPredicted RBP8.38□□□□□ -1.07
PRPF38B-201ENST00000370021 CACNG8Q8WXS5 425 aa8.38□□□□□ -1.07
PRPF38B-201ENST00000370021 URB1-AS1Q96HZ7 61 aa8.38□□□□□ -1.07
PRPF38B-201ENST00000370021 INSIG2Q9Y5U4 225 aa8.38□□□□□ -1.07
PRPF38B-201ENST00000370021 ZFHX2Q9C0A1 2572 aaPredicted RBP8.38□□□□□ -1.07
PRPF38B-201ENST00000370021 C9orf118A6NHY6 69 aa8.38□□□□□ -1.07
PRPF38B-201ENST00000370021 LOC400499M0QZD8 3231 aa8.38□□□□□ -1.07
PRPF38B-201ENST00000370021 FAM27E3Q08E93 113 aa8.38□□□□□ -1.07
PRPF38B-201ENST00000370021 ADAMTSL5Q6ZMM2 481 aa8.38□□□□□ -1.07
PRPF38B-201ENST00000370021 SIGMAR1Q99720 223 aa8.38□□□□□ -1.07
PRPF38B-201ENST00000370021 NDUFA3O95167 84 aa8.38□□□□□ -1.07
PRPF38B-201ENST00000370021 CNTFRP26992 372 aa8.38□□□□□ -1.07
PRPF38B-201ENST00000370021 EIF4EBP1Q13541 118 aaPredicted RBP8.38□□□□□ -1.07
PRPF38B-201ENST00000370021 MBD6Q96DN6 1003 aa8.38□□□□□ -1.07
PRPF38B-201ENST00000370021 MS4A6AQ9H2W1 248 aa8.38□□□□□ -1.07
PRPF38B-201ENST00000370021 PPBPP02775 128 aa8.37□□□□□ -1.07
PRPF38B-201ENST00000370021 ATP5L2Q7Z4Y8 100 aa8.37□□□□□ -1.07
PRPF38B-201ENST00000370021 PRR7Q8TB68 274 aa8.37□□□□□ -1.07
PRPF38B-201ENST00000370021 JMJD8Q96S16 334 aa8.37□□□□□ -1.07
PRPF38B-201ENST00000370021 ZNF747Q9BV97 191 aa8.37□□□□□ -1.07
PRPF38B-201ENST00000370021 LEPP41159 167 aa8.37□□□□□ -1.07
PRPF38B-201ENST00000370021 KIR2DL2P43627 348 aaPredicted RBP8.37□□□□□ -1.07
PRPF38B-201ENST00000370021 FAM120AOSQ5T036 256 aa8.37□□□□□ -1.07
PRPF38B-201ENST00000370021 IGKV3-7A0A075B6H7 116 aa8.37□□□□□ -1.07
PRPF38B-201ENST00000370021 FAM90A9PA6NNJ1 464 aa8.37□□□□□ -1.07
PRPF38B-201ENST00000370021 NCBP2LA6PVI3 153 aaKnown RBP8.37□□□□□ -1.07
PRPF38B-201ENST00000370021 H3BMG7 143 aa8.37□□□□□ -1.07
PRPF38B-201ENST00000370021 NTN3O00634 580 aaPredicted RBP8.37□□□□□ -1.07
PRPF38B-201ENST00000370021 SS18L1O75177 396 aaPredicted RBP8.37□□□□□ -1.07
PRPF38B-201ENST00000370021 CD40P25942 277 aa8.37□□□□□ -1.07
PRPF38B-201ENST00000370021 FDCSPQ8NFU4 85 aa8.37□□□□□ -1.07
PRPF38B-201ENST00000370021 FMC1Q96HJ9 113 aa8.37□□□□□ -1.07
PRPF38B-201ENST00000370021 PSG8Q9UQ74 426 aa8.37□□□□□ -1.07
PRPF38B-201ENST00000370021 A0A1W2PPI3 338 aa8.36□□□□□ -1.07
PRPF38B-201ENST00000370021 H7C2G1 150 aa8.36□□□□□ -1.07
PRPF38B-201ENST00000370021 RASL11AQ6T310 242 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms