RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 PPP5D1E7EU14 171 aa13.5□□□□□ -0.25
UBE3D-203ENST00000369747 M0QZK8 103 aa13.5□□□□□ -0.25
UBE3D-203ENST00000369747 TYMSP04818 313 aa13.5□□□□□ -0.25
UBE3D-203ENST00000369747 GP9P14770 177 aa13.5□□□□□ -0.25
UBE3D-203ENST00000369747 NDUFA6P56556 154 aa13.5□□□□□ -0.25
UBE3D-203ENST00000369747 FOXL1Q12952 345 aa13.5□□□□□ -0.25
UBE3D-203ENST00000369747 IGF2BP2-AS1Q96M15 143 aa13.5□□□□□ -0.25
UBE3D-203ENST00000369747 HIGD1AQ9Y241 93 aa13.5□□□□□ -0.25
UBE3D-203ENST00000369747 IGLV2-8P01709 118 aa13.49□□□□□ -0.25
UBE3D-203ENST00000369747 HOXA5P20719 270 aa13.49□□□□□ -0.25
UBE3D-203ENST00000369747 OR5I1Q13606 314 aa13.49□□□□□ -0.25
UBE3D-203ENST00000369747 LEMD1Q68G75 181 aa13.49□□□□□ -0.25
UBE3D-203ENST00000369747 TMEM86BQ8N661 226 aa13.49□□□□□ -0.25
UBE3D-203ENST00000369747 SGMS2Q8NHU3 365 aa13.49□□□□□ -0.25
UBE3D-203ENST00000369747 RD3LP0DJH9 198 aa13.49□□□□□ -0.25
UBE3D-203ENST00000369747 ZNF418Q8TF45 676 aaPredicted RBP13.49□□□□□ -0.25
UBE3D-203ENST00000369747 MRPL27Q9P0M9 148 aaKnown RBP13.49□□□□□ -0.25
UBE3D-203ENST00000369747 S4R3C0 116 aa13.49□□□□□ -0.25
UBE3D-203ENST00000369747 JMJD1CQ15652 2540 aa13.48□□□□□ -0.25
UBE3D-203ENST00000369747 ATP6V0E1O15342 81 aa13.48□□□□□ -0.25
UBE3D-203ENST00000369747 BLNKQ8WV28 456 aa13.48□□□□□ -0.25
UBE3D-203ENST00000369747 SLC25A39Q9BZJ4 359 aaPredicted RBP13.48□□□□□ -0.25
UBE3D-203ENST00000369747 SETD2Q9BYW2 2564 aaPredicted RBP13.48□□□□□ -0.25
UBE3D-203ENST00000369747 NBEAP1P0C6P0 100 aa13.47□□□□□ -0.25
UBE3D-203ENST00000369747 HILS1P60008 231 aa13.47□□□□□ -0.25
UBE3D-203ENST00000369747 RANP62826 216 aaKnown RBP13.47□□□□□ -0.25
UBE3D-203ENST00000369747 LINC00479Q96M42 142 aa13.47□□□□□ -0.25
UBE3D-203ENST00000369747 LINC00527Q9UJ94 153 aa13.47□□□□□ -0.25
UBE3D-203ENST00000369747 FAM181BA6NEQ2 426 aa13.47□□□□□ -0.25
UBE3D-203ENST00000369747 ZNF98A6NK75 572 aa13.47□□□□□ -0.25
UBE3D-203ENST00000369747 F8W735 103 aaPredicted RBP13.47□□□□□ -0.25
UBE3D-203ENST00000369747 SLC17A3O00476 420 aa13.47□□□□□ -0.25
UBE3D-203ENST00000369747 PEX7O00628 323 aa13.47□□□□□ -0.25
UBE3D-203ENST00000369747 TOMM40O96008 361 aa13.47□□□□□ -0.25
UBE3D-203ENST00000369747 FABP1P07148 127 aa13.47□□□□□ -0.25
UBE3D-203ENST00000369747 TAS2R60P59551 318 aa13.47□□□□□ -0.25
UBE3D-203ENST00000369747 GCGP01275 180 aa13.46□□□□□ -0.25
UBE3D-203ENST00000369747 IGHG2P01859 326 aa13.46□□□□□ -0.25
UBE3D-203ENST00000369747 S100A8P05109 93 aa13.46□□□□□ -0.25
UBE3D-203ENST00000369747 ERVFC1-1P60608 527 aa13.46□□□□□ -0.25
UBE3D-203ENST00000369747 ZNF600Q6ZNG1 722 aa13.46□□□□□ -0.25
UBE3D-203ENST00000369747 ZNF491Q8N8L2 437 aa13.46□□□□□ -0.25
UBE3D-203ENST00000369747 TCEAL7Q9BRU2 100 aa13.46□□□□□ -0.25
UBE3D-203ENST00000369747 IL36BQ9NZH7 164 aa13.46□□□□□ -0.25
UBE3D-203ENST00000369747 V9GYV3 84 aa13.46□□□□□ -0.25
UBE3D-203ENST00000369747 IFITM10A6NMD0 228 aa13.45□□□□□ -0.26
UBE3D-203ENST00000369747 CDX1P47902 265 aaPredicted RBP13.45□□□□□ -0.26
UBE3D-203ENST00000369747 MEOX2P50222 304 aa13.45□□□□□ -0.26
UBE3D-203ENST00000369747 CNN1P51911 297 aaKnown RBP13.45□□□□□ -0.26
UBE3D-203ENST00000369747 MFAP4P55083 255 aa13.45□□□□□ -0.26
UBE3D-203ENST00000369747 GNG5P63218 68 aa13.45□□□□□ -0.26
UBE3D-203ENST00000369747 TMEM95Q3KNT9 176 aa13.45□□□□□ -0.26
UBE3D-203ENST00000369747 ACTL10Q5JWF8 245 aa13.45□□□□□ -0.26
UBE3D-203ENST00000369747 C12orf57Q99622 126 aa13.45□□□□□ -0.26
UBE3D-203ENST00000369747 TMEM14CQ9P0S9 112 aa13.45□□□□□ -0.26
UBE3D-203ENST00000369747 ZNF320A2RRD8 509 aa13.45□□□□□ -0.26
UBE3D-203ENST00000369747 PGPA6NDG6 321 aa13.45□□□□□ -0.26
UBE3D-203ENST00000369747 G3V318 75 aa13.45□□□□□ -0.26
UBE3D-203ENST00000369747 GNG7O60262 68 aa13.45□□□□□ -0.26
UBE3D-203ENST00000369747 NDUFB8O95169 186 aa13.45□□□□□ -0.26
UBE3D-203ENST00000369747 BTF3L4Q96K17 158 aa13.45□□□□□ -0.26
UBE3D-203ENST00000369747 NOL4LQ96MY1 436 aaPredicted RBP13.45□□□□□ -0.26
UBE3D-203ENST00000369747 NPFFR1Q9GZQ6 430 aa13.45□□□□□ -0.26
UBE3D-203ENST00000369747 TRAV30A0A087WSZ9 112 aa13.44□□□□□ -0.26
UBE3D-203ENST00000369747 TRAV34A0A0B4J273 112 aa13.44□□□□□ -0.26
UBE3D-203ENST00000369747 WI2-2373I1.2A0A1W2PRP0 233 aa13.44□□□□□ -0.26
UBE3D-203ENST00000369747 H3BRN7 92 aa13.44□□□□□ -0.26
UBE3D-203ENST00000369747 H3BTX0 84 aa13.44□□□□□ -0.26
UBE3D-203ENST00000369747 OR2J3O76001 311 aa13.44□□□□□ -0.26
UBE3D-203ENST00000369747 SLC25A5P05141 298 aaKnown RBP13.44□□□□□ -0.26
UBE3D-203ENST00000369747 YPEL3P61236 119 aaPredicted RBP13.44□□□□□ -0.26
UBE3D-203ENST00000369747 RPL15P61313 204 aaKnown RBP13.44□□□□□ -0.26
UBE3D-203ENST00000369747 SRSF2Q01130 221 aaKnown RBP13.44□□□□□ -0.26
UBE3D-203ENST00000369747 ECSCRQ19T08 205 aa13.44□□□□□ -0.26
UBE3D-203ENST00000369747 RNF125Q96EQ8 232 aa13.44□□□□□ -0.26
UBE3D-203ENST00000369747 RNASE7Q9H1E1 156 aaKnown RBP13.44□□□□□ -0.26
UBE3D-203ENST00000369747 OSTCQ9NRP0 149 aa13.44□□□□□ -0.26
UBE3D-203ENST00000369747 EPDR1Q9UM22 224 aa13.44□□□□□ -0.26
UBE3D-203ENST00000369747 ISLRO14498 428 aa13.43□□□□□ -0.26
UBE3D-203ENST00000369747 RNASE1P07998 156 aaKnown RBP13.43□□□□□ -0.26
UBE3D-203ENST00000369747 GFI1BQ5VTD9 330 aa13.43□□□□□ -0.26
UBE3D-203ENST00000369747 NHLRC2Q8NBF2 726 aa13.43□□□□□ -0.26
UBE3D-203ENST00000369747 SHANK2-AS3Q9BTD1 123 aa13.43□□□□□ -0.26
UBE3D-203ENST00000369747 ZNF702PQ9H963 129 aa13.43□□□□□ -0.26
UBE3D-203ENST00000369747 C21orf62Q9NYP8 219 aa13.43□□□□□ -0.26
UBE3D-203ENST00000369747 THYN1Q9P016 225 aa13.43□□□□□ -0.26
UBE3D-203ENST00000369747 IL4P05112 153 aa13.43□□□□□ -0.26
UBE3D-203ENST00000369747 MGST1P10620 155 aaKnown RBP13.43□□□□□ -0.26
UBE3D-203ENST00000369747 Q9H3A6 140 aa13.43□□□□□ -0.26
UBE3D-203ENST00000369747 ZNF586Q9NXT0 402 aa13.43□□□□□ -0.26
UBE3D-203ENST00000369747 TRAV9-1A0A075B6T8 112 aa13.42□□□□□ -0.26
UBE3D-203ENST00000369747 IGF1P05019 195 aa13.42□□□□□ -0.26
UBE3D-203ENST00000369747 HIST1H1EP10412 219 aaKnown RBP13.42□□□□□ -0.26
UBE3D-203ENST00000369747 HIST1H1BP16401 226 aaKnown RBP13.42□□□□□ -0.26
UBE3D-203ENST00000369747 RPEL1Q2QD12 228 aa13.42□□□□□ -0.26
UBE3D-203ENST00000369747 Q56UQ5 140 aa13.42□□□□□ -0.26
UBE3D-203ENST00000369747 UNQ5815/PRO19632Q6UWF5 114 aa13.42□□□□□ -0.26
UBE3D-203ENST00000369747 FAM110DQ8TAY7 271 aaPredicted RBP13.42□□□□□ -0.26
UBE3D-203ENST00000369747 PRSS22Q9GZN4 317 aa13.42□□□□□ -0.26
UBE3D-203ENST00000369747 IGHV3-23P01764 117 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms