RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 EPPINO95925 133 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 MT-ATP8P03928 68 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 BCL3P20749 454 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 ZNF141Q15928 474 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 ZNF550Q7Z398 422 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 OR51H1Q8NH63 302 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 CHCHD1Q96BP2 118 aaKnown RBP4.05□□□□□ -1.76
UBE3D-202ENST00000369746 TDRD6O60522 2096 aaKnown RBP4.05□□□□□ -1.76
UBE3D-202ENST00000369746 TRPM6Q9BX84 2022 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 KNTC1P50748 2209 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 GGTLC3B5MD39 225 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 M0R1B8 84 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 APCSP02743 223 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 ATP5G1P05496 136 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 CNTFRP26992 372 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 ATP5G3P48201 142 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 FXYD6P3P58550 94 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 NANOS3P60323 173 aaKnown RBP4.05□□□□□ -1.76
UBE3D-202ENST00000369746 ATP5G2Q06055 141 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 KRTAP1-1Q07627 177 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 GAGE2BQ13066 116 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 ZNF726P1Q15940 193 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 GAGE2EQ4V326 116 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 TTC32Q5I0X7 151 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 LCN10Q6JVE6 187 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 AMTNQ6UX39 209 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 TMEM136Q6ZRR5 245 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 C3orf56Q8N813 242 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 PPDPFLQ8WWR9 84 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 GAGE2DQ9UEU5 116 aa4.05□□□□□ -1.76
UBE3D-202ENST00000369746 F8P00451 2351 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 FAM236AA0A1B0GUQ0 79 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 FAM236BA0A1B0GV22 79 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 ZFP92A6NM28 416 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 HES1Q14469 280 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 TMEM187Q14656 261 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 GAGE13Q4V321 117 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 LYRM7Q5U5X0 104 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 TMEM252Q8N6L7 170 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 AMELYQ99218 206 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 LINC01587Q99440 93 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 FAM103A1Q9BTL3 118 aaKnown RBP4.04□□□□□ -1.76
UBE3D-202ENST00000369746 KCNIP2Q9NS61 270 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 KLF13Q9Y2Y9 288 aaPredicted RBP4.04□□□□□ -1.76
UBE3D-202ENST00000369746 DMDP11532 3685 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 TRBV5-4A0A0C4DH59 114 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 CTXND1A0A1B0GTU2 59 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 C9JCJ5 164 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 F5H697 171 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 NDUFB4O95168 129 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 SLC25A5P05141 298 aaKnown RBP4.04□□□□□ -1.76
UBE3D-202ENST00000369746 HLA-DRB4P13762 266 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 CLDN17P56750 224 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 QRFPP83859 136 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 ZNF90Q03938 601 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 LOXL1Q08397 574 aaPredicted RBP4.04□□□□□ -1.76
UBE3D-202ENST00000369746 DIAPH2-AS1Q14236 149 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 ATP1A1-AS1Q5TC04 95 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 TSPO2Q5TGU0 170 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 EBLN2Q6P2I7 272 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 Q6P435 159 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 ZNF695Q8IW36 515 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 OSR1Q8TAX0 266 aaPredicted RBP4.04□□□□□ -1.76
UBE3D-202ENST00000369746 H1FXQ92522 213 aaKnown RBP4.04□□□□□ -1.76
UBE3D-202ENST00000369746 C4orf45Q96LM5 186 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 C9orf85Q96MD7 179 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 MCHR1Q99705 422 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 KIR2DL4Q99706 377 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 NAA60Q9H7X0 242 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 C19orf25Q9UFG5 118 aaPredicted RBP4.04□□□□□ -1.76
UBE3D-202ENST00000369746 U3KQE9 123 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 HLA-DRB4X5D2U9 266 aa4.04□□□□□ -1.76
UBE3D-202ENST00000369746 F6UB75 175 aa4.03□□□□□ -1.76
UBE3D-202ENST00000369746 BUB3O43684 328 aa4.03□□□□□ -1.76
UBE3D-202ENST00000369746 APOMO95445 188 aa4.03□□□□□ -1.76
UBE3D-202ENST00000369746 IGHG1P01857 330 aa4.03□□□□□ -1.76
UBE3D-202ENST00000369746 MRPL3P09001 348 aaKnown RBP4.03□□□□□ -1.76
UBE3D-202ENST00000369746 IZUMO4Q1ZYL8 232 aa4.03□□□□□ -1.76
UBE3D-202ENST00000369746 ASPHD1Q5U4P2 390 aa4.03□□□□□ -1.76
UBE3D-202ENST00000369746 C16orf47Q6ZP98 133 aaPredicted RBP4.03□□□□□ -1.76
UBE3D-202ENST00000369746 COX8CQ7Z4L0 72 aa4.03□□□□□ -1.76
UBE3D-202ENST00000369746 ATOH7Q8N100 152 aa4.03□□□□□ -1.76
UBE3D-202ENST00000369746 DNAJA3Q96EY1 480 aa4.03□□□□□ -1.76
UBE3D-202ENST00000369746 LINC01600Q96MT4 127 aa4.03□□□□□ -1.76
UBE3D-202ENST00000369746 EMC6Q9BV81 110 aa4.03□□□□□ -1.76
UBE3D-202ENST00000369746 MPC1Q9Y5U8 109 aa4.03□□□□□ -1.76
UBE3D-202ENST00000369746 AKAP9Q99996 3911 aa4.03□□□□□ -1.76
UBE3D-202ENST00000369746 CACNA1DQ01668 2161 aa4.03□□□□□ -1.76
UBE3D-202ENST00000369746 C5orf63A6NC05 138 aa4.03□□□□□ -1.76
UBE3D-202ENST00000369746 SNURFLB1AK76 121 aa4.03□□□□□ -1.76
UBE3D-202ENST00000369746 SLC25A14O95258 325 aaPredicted RBP4.03□□□□□ -1.76
UBE3D-202ENST00000369746 SLC25A16P16260 332 aa4.03□□□□□ -1.76
UBE3D-202ENST00000369746 MPV17P39210 176 aa4.03□□□□□ -1.76
UBE3D-202ENST00000369746 KIF26BQ2KJY2 2108 aa4.03□□□□□ -1.76
UBE3D-202ENST00000369746 LINC01545Q5VT33 79 aa4.03□□□□□ -1.76
UBE3D-202ENST00000369746 MORN3Q6PF18 240 aaPredicted RBP4.03□□□□□ -1.76
UBE3D-202ENST00000369746 ZNF114Q8NC26 417 aa4.03□□□□□ -1.76
UBE3D-202ENST00000369746 SLC25A44Q96H78 314 aaPredicted RBP4.03□□□□□ -1.76
UBE3D-202ENST00000369746 GPX7Q96SL4 187 aaPredicted RBP4.03□□□□□ -1.76
UBE3D-202ENST00000369746 ZNF747Q9BV97 191 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms