RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 TNFRSF6BO95407 300 aa14.81□□□□□ -0.04
SNX27-202ENST00000368841 DEFB131AP59861 70 aa14.81□□□□□ -0.04
SNX27-202ENST00000368841 SLC25A48Q6ZT89 311 aaKnown RBP14.81□□□□□ -0.04
SNX27-202ENST00000368841 CRYGSP22914 178 aa14.81□□□□□ -0.04
SNX27-202ENST00000368841 GAGE2AQ6NT46 116 aa14.81□□□□□ -0.04
SNX27-202ENST00000368841 GLRX5Q86SX6 157 aa14.81□□□□□ -0.04
SNX27-202ENST00000368841 LINC00479Q96M42 142 aa14.81□□□□□ -0.04
SNX27-202ENST00000368841 ICE1Q9Y2F5 2266 aa14.81□□□□□ -0.04
SNX27-202ENST00000368841 GAGE12JA6NER3 117 aa14.81□□□□□ -0.04
SNX27-202ENST00000368841 OVOL3O00110 214 aa14.81□□□□□ -0.04
SNX27-202ENST00000368841 GAGE1Q13065 139 aa14.81□□□□□ -0.04
SNX27-202ENST00000368841 GAGE4Q13068 117 aa14.81□□□□□ -0.04
SNX27-202ENST00000368841 GAGE5Q13069 117 aa14.81□□□□□ -0.04
SNX27-202ENST00000368841 MS4A6AQ9H2W1 248 aa14.81□□□□□ -0.04
SNX27-202ENST00000368841 B4DSR2 109 aa14.81□□□□□ -0.04
SNX27-202ENST00000368841 NTF4P34130 210 aa14.81□□□□□ -0.04
SNX27-202ENST00000368841 PSG3Q16557 428 aa14.81□□□□□ -0.04
SNX27-202ENST00000368841 BCL6BQ8N143 479 aaPredicted RBP14.81□□□□□ -0.04
SNX27-202ENST00000368841 TRBV7-1A0A0A6YYK4 115 aa14.8□□□□□ -0.04
SNX27-202ENST00000368841 MST1P26927 711 aa14.8□□□□□ -0.04
SNX27-202ENST00000368841 RHPN1-AS1Q9BWJ2 59 aa14.8□□□□□ -0.04
SNX27-202ENST00000368841 AMN1Q8IY45 258 aa14.8□□□□□ -0.04
SNX27-202ENST00000368841 PLSCR4Q9NRQ2 329 aa14.8□□□□□ -0.04
SNX27-202ENST00000368841 SP5Q6BEB4 398 aaPredicted RBP14.8□□□□□ -0.04
SNX27-202ENST00000368841 TRAV12-2A0A075B6T6 113 aa14.8□□□□□ -0.04
SNX27-202ENST00000368841 ESPL1Q14674 2120 aa14.79□□□□□ -0.04
SNX27-202ENST00000368841 MBD3L4A6NDZ8 208 aaPredicted RBP14.79□□□□□ -0.04
SNX27-202ENST00000368841 MBD3L3A6NE82 208 aaPredicted RBP14.79□□□□□ -0.04
SNX27-202ENST00000368841 MBD3L5A6NJ08 208 aaPredicted RBP14.79□□□□□ -0.04
SNX27-202ENST00000368841 RPL32P62910 135 aaKnown RBP14.79□□□□□ -0.04
SNX27-202ENST00000368841 MBD3L2Q8NHZ7 208 aaPredicted RBP14.79□□□□□ -0.04
SNX27-202ENST00000368841 NTN3O00634 580 aaPredicted RBP14.79□□□□□ -0.04
SNX27-202ENST00000368841 SPINK13Q1W4C9 94 aa14.79□□□□□ -0.04
SNX27-202ENST00000368841 FAM90A2PQ658T7 463 aa14.79□□□□□ -0.04
SNX27-202ENST00000368841 LINC01356Q8N9X3 169 aa14.79□□□□□ -0.04
SNX27-202ENST00000368841 TMEM256Q8N2U0 113 aa14.79□□□□□ -0.04
SNX27-202ENST00000368841 A0A1B0GWJ7 208 aa14.79□□□□□ -0.04
SNX27-202ENST00000368841 HIST1H2BLQ99880 126 aa14.79□□□□□ -0.04
SNX27-202ENST00000368841 AGMATQ9BSE5 352 aa14.79□□□□□ -0.04
SNX27-202ENST00000368841 TRAV26-2A0A0B4J265 109 aa14.78□□□□□ -0.04
SNX27-202ENST00000368841 C2orf82Q6UX34 121 aa14.78□□□□□ -0.04
SNX27-202ENST00000368841 SIGMAR1Q99720 223 aa14.78□□□□□ -0.04
SNX27-202ENST00000368841 TMEM238C9JI98 176 aa14.78□□□□□ -0.04
SNX27-202ENST00000368841 IGKV1-5P01602 117 aa14.78□□□□□ -0.04
SNX27-202ENST00000368841 CSRP1P21291 193 aaKnown RBP14.78□□□□□ -0.04
SNX27-202ENST00000368841 SCN10AQ9Y5Y9 1956 aa14.78□□□□□ -0.04
SNX27-202ENST00000368841 DSCR9P59020 149 aa14.78□□□□□ -0.04
SNX27-202ENST00000368841 C5orf64Q2M2E5 130 aa14.78□□□□□ -0.04
SNX27-202ENST00000368841 ZNF318Q5VUA4 2279 aa14.78□□□□□ -0.04
SNX27-202ENST00000368841 A0A0G2JMZ2 1700 aa14.78□□□□□ -0.04
SNX27-202ENST00000368841 LRRC37A2A6NM11 1700 aa14.78□□□□□ -0.04
SNX27-202ENST00000368841 IGKV1D-17A0A075B6S4 117 aa14.78□□□□□ -0.04
SNX27-202ENST00000368841 J3QRE1 110 aa14.78□□□□□ -0.04
SNX27-202ENST00000368841 LEPROTO15243 131 aa14.78□□□□□ -0.04
SNX27-202ENST00000368841 PFN2P35080 140 aa14.78□□□□□ -0.04
SNX27-202ENST00000368841 RASL10AQ92737 203 aa14.78□□□□□ -0.04
SNX27-202ENST00000368841 DOCK6Q96HP0 2047 aa14.77□□□□□ -0.04
SNX27-202ENST00000368841 RPRMLQ8N4K4 120 aa14.77□□□□□ -0.04
SNX27-202ENST00000368841 IGKV1-16P04430 117 aa14.77□□□□□ -0.04
SNX27-202ENST00000368841 HEPN1Q6WQI6 88 aa14.77□□□□□ -0.04
SNX27-202ENST00000368841 C20orf204Q6ZNR8 217 aa14.77□□□□□ -0.04
SNX27-202ENST00000368841 VWC2LB2RUY7 222 aa14.77□□□□□ -0.05
SNX27-202ENST00000368841 CLPSP04118 112 aa14.77□□□□□ -0.05
SNX27-202ENST00000368841 SRRM5B3KS81 715 aa14.77□□□□□ -0.05
SNX27-202ENST00000368841 IGFBPL1Q8WX77 278 aa14.77□□□□□ -0.05
SNX27-202ENST00000368841 WDR83OSQ9Y284 106 aa14.77□□□□□ -0.05
SNX27-202ENST00000368841 SS18Q15532 418 aa14.76□□□□□ -0.05
SNX27-202ENST00000368841 ID3Q02535 119 aa14.76□□□□□ -0.05
SNX27-202ENST00000368841 PAX9P55771 341 aa14.76□□□□□ -0.05
SNX27-202ENST00000368841 ANXA2RQ3ZCQ2 193 aa14.76□□□□□ -0.05
SNX27-202ENST00000368841 LGALS1P09382 135 aaKnown RBP14.76□□□□□ -0.05
SNX27-202ENST00000368841 CGB7P0DN87 165 aa14.76□□□□□ -0.05
SNX27-202ENST00000368841 HSD52Q0P140 79 aa14.76□□□□□ -0.05
SNX27-202ENST00000368841 ADAMTS7Q9UKP4 1686 aa14.76□□□□□ -0.05
SNX27-202ENST00000368841 E7EQL1 145 aa14.76□□□□□ -0.05
SNX27-202ENST00000368841 PPBPP02775 128 aa14.76□□□□□ -0.05
SNX27-202ENST00000368841 SIGLEC9Q9Y336 463 aa14.76□□□□□ -0.05
SNX27-202ENST00000368841 CACNA1IQ9P0X4 2223 aa14.75□□□□□ -0.05
SNX27-202ENST00000368841 ESDP10768 282 aa14.75□□□□□ -0.05
SNX27-202ENST00000368841 NEGR1Q7Z3B1 354 aa14.75□□□□□ -0.05
SNX27-202ENST00000368841 ANAPC10Q9UM13 185 aa14.75□□□□□ -0.05
SNX27-202ENST00000368841 AMBPP02760 352 aa14.75□□□□□ -0.05
SNX27-202ENST00000368841 DUX4L9Q6RFH8 374 aaPredicted RBP14.75□□□□□ -0.05
SNX27-202ENST00000368841 PRIMA1Q86XR5 153 aa14.75□□□□□ -0.05
SNX27-202ENST00000368841 TIMM21Q9BVV7 248 aa14.74□□□□□ -0.05
SNX27-202ENST00000368841 PNRC2Q9NPJ4 139 aaKnown RBP14.74□□□□□ -0.05
SNX27-202ENST00000368841 TMEM213A2RRL7 107 aa14.74□□□□□ -0.05
SNX27-202ENST00000368841 RNASE13Q5GAN3 156 aaKnown RBP14.74□□□□□ -0.05
SNX27-202ENST00000368841 NEUROG3Q9Y4Z2 214 aa14.74□□□□□ -0.05
SNX27-202ENST00000368841 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.74□□□□□ -0.05
SNX27-202ENST00000368841 ATP6V0E1O15342 81 aa14.74□□□□□ -0.05
SNX27-202ENST00000368841 SUPT4H1P63272 117 aaKnown RBP14.74□□□□□ -0.05
SNX27-202ENST00000368841 IGLV3-32A0A0A0MS00 114 aa14.74□□□□□ -0.05
SNX27-202ENST00000368841 GAGE12BA1L429 117 aa14.74□□□□□ -0.05
SNX27-202ENST00000368841 GAGE7O76087 117 aa14.74□□□□□ -0.05
SNX27-202ENST00000368841 GAGE12FP0CL80 117 aa14.74□□□□□ -0.05
SNX27-202ENST00000368841 GAGE12GP0CL81 117 aa14.74□□□□□ -0.05
SNX27-202ENST00000368841 GAGE12IP0CL82 117 aa14.74□□□□□ -0.05
SNX27-202ENST00000368841 GHRHP01286 108 aa14.73□□□□□ -0.05
SNX27-202ENST00000368841 PRSS57Q6UWY2 283 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms