RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 SLC25A2Q9BXI2 301 aa7.68□□□□□ -1.18
TPM3-210ENST00000368530 MRPL32Q9BYC8 188 aaKnown RBP7.68□□□□□ -1.18
TPM3-210ENST00000368530 C21orf62Q9NYP8 219 aa7.68□□□□□ -1.18
TPM3-210ENST00000368530 YTHDF2Q9Y5A9 579 aaKnown RBP7.68□□□□□ -1.18
TPM3-210ENST00000368530 OR2T8A6NH00 312 aa7.67□□□□□ -1.18
TPM3-210ENST00000368530 DNASE2O00115 360 aaPredicted RBP7.67□□□□□ -1.18
TPM3-210ENST00000368530 HYPMO75409 117 aa7.67□□□□□ -1.18
TPM3-210ENST00000368530 IGKV1-17P01599 117 aa7.67□□□□□ -1.18
TPM3-210ENST00000368530 SNRPCP09234 159 aaKnown RBP7.67□□□□□ -1.18
TPM3-210ENST00000368530 RD3LP0DJH9 198 aa7.67□□□□□ -1.18
TPM3-210ENST00000368530 PYYP10082 97 aa7.67□□□□□ -1.18
TPM3-210ENST00000368530 TAGLN2P37802 199 aaKnown RBP7.67□□□□□ -1.18
TPM3-210ENST00000368530 RHOGP84095 191 aa7.67□□□□□ -1.18
TPM3-210ENST00000368530 LEMD1Q68G75 181 aa7.67□□□□□ -1.18
TPM3-210ENST00000368530 OR4X2Q8NGF9 303 aa7.67□□□□□ -1.18
TPM3-210ENST00000368530 RPS10P5Q9NQ39 176 aa7.67□□□□□ -1.18
TPM3-210ENST00000368530 THYN1Q9P016 225 aa7.67□□□□□ -1.18
TPM3-210ENST00000368530 TRAV41A0A0B4J266 112 aa7.66□□□□□ -1.18
TPM3-210ENST00000368530 ZNF727A8MUV8 499 aa7.66□□□□□ -1.18
TPM3-210ENST00000368530 HIST1H1BP16401 226 aaKnown RBP7.66□□□□□ -1.18
TPM3-210ENST00000368530 UBE2L3P68036 154 aaKnown RBP7.66□□□□□ -1.18
TPM3-210ENST00000368530 ZNF329Q86UD4 541 aa7.66□□□□□ -1.18
TPM3-210ENST00000368530 OR51G1Q8NGK1 321 aa7.66□□□□□ -1.18
TPM3-210ENST00000368530 FAM167A-AS1Q96KT0 104 aa7.66□□□□□ -1.18
TPM3-210ENST00000368530 NOL4LQ96MY1 436 aaPredicted RBP7.66□□□□□ -1.18
TPM3-210ENST00000368530 NIPSNAP3BQ9BS92 247 aa7.66□□□□□ -1.18
TPM3-210ENST00000368530 PAXXQ9BUH6 204 aa7.66□□□□□ -1.18
TPM3-210ENST00000368530 HIGD1AQ9Y241 93 aa7.66□□□□□ -1.18
TPM3-210ENST00000368530 STAB2Q8WWQ8 2551 aa7.65□□□□□ -1.18
TPM3-210ENST00000368530 ELOA3CA0A087WX78 387 aaPredicted RBP7.65□□□□□ -1.18
TPM3-210ENST00000368530 SCO2A0A1W2PP80 73 aa7.65□□□□□ -1.18
TPM3-210ENST00000368530 C7orf77A4D0Y5 90 aa7.65□□□□□ -1.18
TPM3-210ENST00000368530 F8W735 103 aaPredicted RBP7.65□□□□□ -1.18
TPM3-210ENST00000368530 FABP1P07148 127 aa7.65□□□□□ -1.18
TPM3-210ENST00000368530 NPPCP23582 126 aa7.65□□□□□ -1.18
TPM3-210ENST00000368530 C15orf32Q32M92 178 aa7.65□□□□□ -1.18
TPM3-210ENST00000368530 PQLC2Q6ZP29 291 aa7.65□□□□□ -1.18
TPM3-210ENST00000368530 TVP23CQ96ET8 276 aa7.65□□□□□ -1.18
TPM3-210ENST00000368530 SMIM7Q9BQ49 75 aa7.65□□□□□ -1.18
TPM3-210ENST00000368530 TMEM167BQ9NRX6 74 aa7.65□□□□□ -1.18
TPM3-210ENST00000368530 TRAV30A0A087WSZ9 112 aa7.64□□□□□ -1.19
TPM3-210ENST00000368530 F6UZH7 168 aa7.64□□□□□ -1.19
TPM3-210ENST00000368530 TMEM250H0YL14 139 aa7.64□□□□□ -1.19
TPM3-210ENST00000368530 M0QZK8 103 aa7.64□□□□□ -1.19
TPM3-210ENST00000368530 TOMM40O96008 361 aa7.64□□□□□ -1.19
TPM3-210ENST00000368530 IL4P05112 153 aa7.64□□□□□ -1.19
TPM3-210ENST00000368530 GPR183P32249 361 aa7.64□□□□□ -1.19
TPM3-210ENST00000368530 C8orf86Q6ZUL3 223 aa7.64□□□□□ -1.19
TPM3-210ENST00000368530 SUN5Q8TC36 379 aa7.64□□□□□ -1.19
TPM3-210ENST00000368530 TMEM68Q96MH6 324 aa7.64□□□□□ -1.19
TPM3-210ENST00000368530 GPR61Q9BZJ8 451 aa7.64□□□□□ -1.19
TPM3-210ENST00000368530 PARLQ9H300 379 aa7.64□□□□□ -1.19
TPM3-210ENST00000368530 OR51M1Q9H341 326 aa7.64□□□□□ -1.19
TPM3-210ENST00000368530 DYNC2H1Q8NCM8 4307 aaKnown RBP7.64□□□□□ -1.19
TPM3-210ENST00000368530 IGHV3-35A0A0C4DH35 117 aa7.63□□□□□ -1.19
TPM3-210ENST00000368530 TSPAN4O14817 238 aa7.63□□□□□ -1.19
TPM3-210ENST00000368530 PDE6DO43924 150 aa7.63□□□□□ -1.19
TPM3-210ENST00000368530 NDUFB4O95168 129 aa7.63□□□□□ -1.19
TPM3-210ENST00000368530 RPLP1P05386 114 aaKnown RBP7.63□□□□□ -1.19
TPM3-210ENST00000368530 NHLRC4P0CG21 123 aaPredicted RBP7.63□□□□□ -1.19
TPM3-210ENST00000368530 MYCNOSP40205 109 aa7.63□□□□□ -1.19
TPM3-210ENST00000368530 PLP1P60201 277 aa7.63□□□□□ -1.19
TPM3-210ENST00000368530 ADIRFQ15847 76 aa7.63□□□□□ -1.19
TPM3-210ENST00000368530 C19orf54Q5BKX5 351 aa7.63□□□□□ -1.19
TPM3-210ENST00000368530 KHDC1LQ5JSQ8 128 aa7.63□□□□□ -1.19
TPM3-210ENST00000368530 NECAP1Q8NC96 275 aa7.63□□□□□ -1.19
TPM3-210ENST00000368530 ZNF502Q8TBZ5 544 aa7.63□□□□□ -1.19
TPM3-210ENST00000368530 VN1R17PQ8TDU5 208 aa7.63□□□□□ -1.19
TPM3-210ENST00000368530 BLNKQ8WV28 456 aa7.63□□□□□ -1.19
TPM3-210ENST00000368530 RNF125Q96EQ8 232 aa7.63□□□□□ -1.19
TPM3-210ENST00000368530 CHRDL1Q9BU40 450 aa7.63□□□□□ -1.19
TPM3-210ENST00000368530 DERL1Q9BUN8 251 aa7.63□□□□□ -1.19
TPM3-210ENST00000368530 MCRIP2Q9BUT9 160 aaKnown RBP7.63□□□□□ -1.19
TPM3-210ENST00000368530 GNB4Q9HAV0 340 aa7.63□□□□□ -1.19
TPM3-210ENST00000368530 IGHV3OR16-8A0A075B7F1 116 aa7.62□□□□□ -1.19
TPM3-210ENST00000368530 TRBV9A0A0B4J1U6 114 aa7.62□□□□□ -1.19
TPM3-210ENST00000368530 H3BTX0 84 aa7.62□□□□□ -1.19
TPM3-210ENST00000368530 IGHG2P01859 326 aa7.62□□□□□ -1.19
TPM3-210ENST00000368530 TRGV3P03979 118 aa7.62□□□□□ -1.19
TPM3-210ENST00000368530 CRIP2P52943 208 aaPredicted RBP7.62□□□□□ -1.19
TPM3-210ENST00000368530 YPEL3P61236 119 aaPredicted RBP7.62□□□□□ -1.19
TPM3-210ENST00000368530 ATP5G2Q06055 141 aa7.62□□□□□ -1.19
TPM3-210ENST00000368530 RHEBQ15382 184 aa7.62□□□□□ -1.19
TPM3-210ENST00000368530 USF2Q15853 346 aaPredicted RBP7.62□□□□□ -1.19
TPM3-210ENST00000368530 TMEM241Q24JQ0 296 aa7.62□□□□□ -1.19
TPM3-210ENST00000368530 CLEC19AQ6UXS0 136 aa7.62□□□□□ -1.19
TPM3-210ENST00000368530 ZNF491Q8N8L2 437 aa7.62□□□□□ -1.19
TPM3-210ENST00000368530 Q8WTZ3 238 aa7.62□□□□□ -1.19
TPM3-210ENST00000368530 EEF1AKMT3Q96AZ1 226 aa7.62□□□□□ -1.19
TPM3-210ENST00000368530 FXYD5Q96DB9 178 aa7.62□□□□□ -1.19
TPM3-210ENST00000368530 RAX2Q96IS3 184 aa7.62□□□□□ -1.19
TPM3-210ENST00000368530 SLC25A39Q9BZJ4 359 aaPredicted RBP7.62□□□□□ -1.19
TPM3-210ENST00000368530 SDF2L1Q9HCN8 221 aa7.62□□□□□ -1.19
TPM3-210ENST00000368530 NAT8Q9UHE5 227 aa7.62□□□□□ -1.19
TPM3-210ENST00000368530 HUWE1Q7Z6Z7 4374 aaKnown RBP7.62□□□□□ -1.19
TPM3-210ENST00000368530 GGTLC3B5MD39 225 aa7.62□□□□□ -1.19
TPM3-210ENST00000368530 SCGB2A1O75556 95 aa7.62□□□□□ -1.19
TPM3-210ENST00000368530 IGF1P05019 195 aa7.62□□□□□ -1.19
TPM3-210ENST00000368530 CLEC3BP05452 202 aa7.62□□□□□ -1.19
TPM3-210ENST00000368530 CTSGP08311 255 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms