RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 OR1B1Q8NGR6 318 aa11.35□□□□□ -0.59
CKS1B-202ENST00000368436 DEDD2Q8WXF8 326 aa11.35□□□□□ -0.59
CKS1B-202ENST00000368436 GPR82Q96P67 336 aa11.35□□□□□ -0.59
CKS1B-202ENST00000368436 V9GYH0 126 aa11.35□□□□□ -0.59
CKS1B-202ENST00000368436 PCLOQ9Y6V0 5065 aa11.35□□□□□ -0.59
CKS1B-202ENST00000368436 TRAV8-2A0A0B4J237 113 aa11.34□□□□□ -0.59
CKS1B-202ENST00000368436 NOL3O60936 208 aaKnown RBP11.34□□□□□ -0.59
CKS1B-202ENST00000368436 ORM2P19652 201 aa11.34□□□□□ -0.59
CKS1B-202ENST00000368436 PYDC2Q56P42 97 aa11.34□□□□□ -0.59
CKS1B-202ENST00000368436 SPANXN5Q5MJ07 72 aa11.34□□□□□ -0.59
CKS1B-202ENST00000368436 TMEM147Q9BVK8 224 aa11.34□□□□□ -0.59
CKS1B-202ENST00000368436 IGLV2-18A0A075B6J9 118 aa11.33□□□□□ -0.6
CKS1B-202ENST00000368436 CRXO43186 299 aaPredicted RBP11.33□□□□□ -0.6
CKS1B-202ENST00000368436 DUSP14O95147 198 aaKnown RBP11.33□□□□□ -0.6
CKS1B-202ENST00000368436 HOXB5P09067 269 aa11.33□□□□□ -0.6
CKS1B-202ENST00000368436 HTN3P15516 51 aa11.33□□□□□ -0.6
CKS1B-202ENST00000368436 S100A7P31151 101 aa11.33□□□□□ -0.6
CKS1B-202ENST00000368436 CNN1P51911 297 aaKnown RBP11.33□□□□□ -0.6
CKS1B-202ENST00000368436 DAD1P61803 113 aa11.33□□□□□ -0.6
CKS1B-202ENST00000368436 ID3Q02535 119 aa11.33□□□□□ -0.6
CKS1B-202ENST00000368436 TMEM88Q6PEY1 159 aa11.33□□□□□ -0.6
CKS1B-202ENST00000368436 TMEM144Q7Z5S9 345 aa11.33□□□□□ -0.6
CKS1B-202ENST00000368436 OR11H7Q8NGC8 314 aa11.33□□□□□ -0.6
CKS1B-202ENST00000368436 AKR1C1Q04828 323 aa11.32□□□□□ -0.6
CKS1B-202ENST00000368436 IGFL4Q6B9Z1 124 aa11.32□□□□□ -0.6
CKS1B-202ENST00000368436 ACOT7LQ6ZUV0 252 aa11.32□□□□□ -0.6
CKS1B-202ENST00000368436 TMEM208Q9BTX3 173 aa11.32□□□□□ -0.6
CKS1B-202ENST00000368436 STRAPQ9Y3F4 350 aaKnown RBP11.32□□□□□ -0.6
CKS1B-202ENST00000368436 H3BP45 60 aa11.31□□□□□ -0.6
CKS1B-202ENST00000368436 H3BRN7 92 aa11.31□□□□□ -0.6
CKS1B-202ENST00000368436 UBE2MP61081 183 aaKnown RBP11.31□□□□□ -0.6
CKS1B-202ENST00000368436 SPINK13Q1W4C9 94 aa11.31□□□□□ -0.6
CKS1B-202ENST00000368436 CYP2G1PQ6ZSU1 146 aa11.31□□□□□ -0.6
CKS1B-202ENST00000368436 RNF182Q8N6D2 247 aa11.31□□□□□ -0.6
CKS1B-202ENST00000368436 SHANK2-AS3Q9BTD1 123 aa11.31□□□□□ -0.6
CKS1B-202ENST00000368436 SLC25A39Q9BZJ4 359 aaPredicted RBP11.31□□□□□ -0.6
CKS1B-202ENST00000368436 PMS2P5A8MQ11 134 aa11.3□□□□□ -0.6
CKS1B-202ENST00000368436 LYRM9A8MSI8 78 aa11.3□□□□□ -0.6
CKS1B-202ENST00000368436 ZNF705GA8MUZ8 300 aaPredicted RBP11.3□□□□□ -0.6
CKS1B-202ENST00000368436 M0R2Z0 102 aa11.3□□□□□ -0.6
CKS1B-202ENST00000368436 INSP01308 110 aa11.3□□□□□ -0.6
CKS1B-202ENST00000368436 PRM2P04554 102 aa11.3□□□□□ -0.6
CKS1B-202ENST00000368436 PLP1P60201 277 aa11.3□□□□□ -0.6
CKS1B-202ENST00000368436 B2MP61769 119 aa11.3□□□□□ -0.6
CKS1B-202ENST00000368436 CCDC190Q86UF4 302 aa11.3□□□□□ -0.6
CKS1B-202ENST00000368436 MUC4Q99102 2169 aa11.3□□□□□ -0.6
CKS1B-202ENST00000368436 ADAP1O75689 374 aa11.29□□□□□ -0.6
CKS1B-202ENST00000368436 IL5P05113 134 aa11.29□□□□□ -0.6
CKS1B-202ENST00000368436 TSPOP30536 169 aa11.29□□□□□ -0.6
CKS1B-202ENST00000368436 FAM3BP58499 235 aaPredicted RBP11.29□□□□□ -0.6
CKS1B-202ENST00000368436 POLR2GP62487 172 aaKnown RBP eCLIP11.29□□□□□ -0.6
CKS1B-202ENST00000368436 SOHLH1Q5JUK2 328 aa11.29□□□□□ -0.6
CKS1B-202ENST00000368436 C15orf53Q8NAA6 179 aa11.29□□□□□ -0.6
CKS1B-202ENST00000368436 PSENENQ9NZ42 101 aa11.29□□□□□ -0.6
CKS1B-202ENST00000368436 HIGD1AQ9Y241 93 aa11.29□□□□□ -0.6
CKS1B-202ENST00000368436 PLAC8L1A1L4L8 177 aa11.28□□□□□ -0.6
CKS1B-202ENST00000368436 C9orf170A2RU37 121 aa11.28□□□□□ -0.6
CKS1B-202ENST00000368436 HYPMO75409 117 aa11.28□□□□□ -0.6
CKS1B-202ENST00000368436 RPL7P18124 248 aaKnown RBP11.28□□□□□ -0.6
CKS1B-202ENST00000368436 S100A5P33763 92 aa11.28□□□□□ -0.6
CKS1B-202ENST00000368436 RAP2BP61225 183 aa11.28□□□□□ -0.6
CKS1B-202ENST00000368436 SELENOTP62341 195 aa11.28□□□□□ -0.6
CKS1B-202ENST00000368436 FGL1Q08830 312 aa11.28□□□□□ -0.6
CKS1B-202ENST00000368436 SMIM8Q96KF7 97 aa11.28□□□□□ -0.6
CKS1B-202ENST00000368436 A0A087X0K7 114 aa11.27□□□□□ -0.61
CKS1B-202ENST00000368436 LINC00869P0C866 280 aa11.27□□□□□ -0.61
CKS1B-202ENST00000368436 AZU1P20160 251 aa11.27□□□□□ -0.61
CKS1B-202ENST00000368436 C1orf134Q5TEV5 83 aa11.27□□□□□ -0.61
CKS1B-202ENST00000368436 BAP18Q8IXM2 172 aa11.27□□□□□ -0.61
CKS1B-202ENST00000368436 ZNF738Q8NE65 137 aa11.27□□□□□ -0.61
CKS1B-202ENST00000368436 TRAV12-2A0A075B6T6 113 aa11.26□□□□□ -0.61
CKS1B-202ENST00000368436 SMCO3A2RU48 225 aa11.26□□□□□ -0.61
CKS1B-202ENST00000368436 FNDC10F2Z333 226 aa11.26□□□□□ -0.61
CKS1B-202ENST00000368436 BOLA2-SMG1P6H3BVE0 249 aa11.26□□□□□ -0.61
CKS1B-202ENST00000368436 K7EPK0 472 aa11.26□□□□□ -0.61
CKS1B-202ENST00000368436 NDUFB6O95139 128 aa11.26□□□□□ -0.61
CKS1B-202ENST00000368436 CXCL3P19876 107 aa11.26□□□□□ -0.61
CKS1B-202ENST00000368436 DLK1P80370 383 aa11.26□□□□□ -0.61
CKS1B-202ENST00000368436 TMEM14EPQ6UXP3 125 aa11.26□□□□□ -0.61
CKS1B-202ENST00000368436 OR8A1Q8NGG7 326 aa11.26□□□□□ -0.61
CKS1B-202ENST00000368436 UHRF2Q96PU4 802 aa11.26□□□□□ -0.61
CKS1B-202ENST00000368436 MRPS12O15235 138 aaKnown RBP11.25□□□□□ -0.61
CKS1B-202ENST00000368436 CCNKO75909 580 aa11.25□□□□□ -0.61
CKS1B-202ENST00000368436 OR5G3P0C626 314 aa11.25□□□□□ -0.61
CKS1B-202ENST00000368436 DEFB130BP0DP73 79 aa11.25□□□□□ -0.61
CKS1B-202ENST00000368436 DEFB130AP0DP74 79 aa11.25□□□□□ -0.61
CKS1B-202ENST00000368436 PSG3Q16557 428 aa11.25□□□□□ -0.61
CKS1B-202ENST00000368436 PATE2Q6UY27 113 aa11.25□□□□□ -0.61
CKS1B-202ENST00000368436 TMEM256Q8N2U0 113 aa11.25□□□□□ -0.61
CKS1B-202ENST00000368436 SRRQ9GZT4 340 aa11.25□□□□□ -0.61
CKS1B-202ENST00000368436 NPVFQ9HCQ7 196 aa11.25□□□□□ -0.61
CKS1B-202ENST00000368436 NAP1L6A6NFF2 107 aa11.24□□□□□ -0.61
CKS1B-202ENST00000368436 CBY3A6NI87 242 aa11.24□□□□□ -0.61
CKS1B-202ENST00000368436 SSSCA1O60232 199 aa11.24□□□□□ -0.61
CKS1B-202ENST00000368436 OR4E1P0C645 316 aa11.24□□□□□ -0.61
CKS1B-202ENST00000368436 TAS2R60P59551 318 aa11.24□□□□□ -0.61
CKS1B-202ENST00000368436 RHOBP62745 196 aa11.24□□□□□ -0.61
CKS1B-202ENST00000368436 HIST1H1AQ02539 215 aaPredicted RBP11.24□□□□□ -0.61
CKS1B-202ENST00000368436 FCN2Q15485 313 aa11.24□□□□□ -0.61
CKS1B-202ENST00000368436 S100A7AQ86SG5 101 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms