RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 TRPT1Q86TN4 253 aaKnown RBP7.23□□□□□ -1.25
CD48-202ENST00000368046 GATAD1Q8WUU5 269 aa7.23□□□□□ -1.25
CD48-202ENST00000368046 GPR82Q96P67 336 aa7.23□□□□□ -1.25
CD48-202ENST00000368046 SSBP4Q9BWG4 385 aaPredicted RBP7.23□□□□□ -1.25
CD48-202ENST00000368046 SLC25A39Q9BZJ4 359 aaPredicted RBP7.23□□□□□ -1.25
CD48-202ENST00000368046 SLC25A22Q9H936 323 aa7.23□□□□□ -1.25
CD48-202ENST00000368046 KNCNA6PVL3 124 aa7.22□□□□□ -1.25
CD48-202ENST00000368046 SSNA1O43805 119 aa7.22□□□□□ -1.25
CD48-202ENST00000368046 OR5G3P0C626 314 aa7.22□□□□□ -1.25
CD48-202ENST00000368046 LINC00869P0C866 280 aa7.22□□□□□ -1.25
CD48-202ENST00000368046 SPP1P10451 314 aa7.22□□□□□ -1.25
CD48-202ENST00000368046 GALR1P47211 349 aa7.22□□□□□ -1.25
CD48-202ENST00000368046 MEOX2P50222 304 aa7.22□□□□□ -1.25
CD48-202ENST00000368046 TMEM41BQ5BJD5 291 aa7.22□□□□□ -1.25
CD48-202ENST00000368046 ACTL10Q5JWF8 245 aa7.22□□□□□ -1.25
CD48-202ENST00000368046 SAMD13Q5VXD3 122 aa7.22□□□□□ -1.25
CD48-202ENST00000368046 PATE2Q6UY27 113 aa7.22□□□□□ -1.25
CD48-202ENST00000368046 TMEM217Q8N7C4 229 aa7.22□□□□□ -1.25
CD48-202ENST00000368046 RARRES2Q99969 163 aa7.22□□□□□ -1.25
CD48-202ENST00000368046 SHANK2-AS3Q9BTD1 123 aa7.22□□□□□ -1.25
CD48-202ENST00000368046 RSG1Q9BU20 258 aa7.22□□□□□ -1.25
CD48-202ENST00000368046 ARL6Q9H0F7 186 aa7.22□□□□□ -1.25
CD48-202ENST00000368046 DOK5Q9P104 306 aa7.22□□□□□ -1.25
CD48-202ENST00000368046 RNF24Q9Y225 148 aa7.22□□□□□ -1.25
CD48-202ENST00000368046 HIGD1AQ9Y241 93 aa7.22□□□□□ -1.25
CD48-202ENST00000368046 E5RGE8 158 aa7.21□□□□□ -1.26
CD48-202ENST00000368046 H3BRN7 92 aa7.21□□□□□ -1.26
CD48-202ENST00000368046 ISLRO14498 428 aa7.21□□□□□ -1.26
CD48-202ENST00000368046 SOCS3O14543 225 aa7.21□□□□□ -1.26
CD48-202ENST00000368046 CA1P00915 261 aaPredicted RBP7.21□□□□□ -1.26
CD48-202ENST00000368046 CAMLGP49069 296 aa7.21□□□□□ -1.26
CD48-202ENST00000368046 PSMB3P49720 205 aa7.21□□□□□ -1.26
CD48-202ENST00000368046 NUTF2P61970 127 aaKnown RBP7.21□□□□□ -1.26
CD48-202ENST00000368046 HBG1P69891 147 aa7.21□□□□□ -1.26
CD48-202ENST00000368046 HBG2P69892 147 aa7.21□□□□□ -1.26
CD48-202ENST00000368046 VWC2Q2TAL6 325 aa7.21□□□□□ -1.26
CD48-202ENST00000368046 Q6ZRG5 221 aa7.21□□□□□ -1.26
CD48-202ENST00000368046 ZNF546Q86UE3 836 aa7.21□□□□□ -1.26
CD48-202ENST00000368046 STX12Q86Y82 276 aa7.21□□□□□ -1.26
CD48-202ENST00000368046 C16orf92Q96LL3 132 aa7.21□□□□□ -1.26
CD48-202ENST00000368046 C17orf77Q96MU5 243 aa7.21□□□□□ -1.26
CD48-202ENST00000368046 LINC00052Q96N35 136 aa7.21□□□□□ -1.26
CD48-202ENST00000368046 MGST2Q99735 147 aa7.21□□□□□ -1.26
CD48-202ENST00000368046 SLC25A31Q9H0C2 315 aa7.21□□□□□ -1.26
CD48-202ENST00000368046 ARV1Q9H2C2 271 aa7.21□□□□□ -1.26
CD48-202ENST00000368046 SLC25A32Q9H2D1 315 aa7.21□□□□□ -1.26
CD48-202ENST00000368046 UQCC1Q9NVA1 299 aa7.21□□□□□ -1.26
CD48-202ENST00000368046 A0A0J9YWU9 116 aa7.2□□□□□ -1.26
CD48-202ENST00000368046 IGSF23A1L1A6 192 aa7.2□□□□□ -1.26
CD48-202ENST00000368046 H0YIZ8 118 aa7.2□□□□□ -1.26
CD48-202ENST00000368046 H3BMM0 161 aa7.2□□□□□ -1.26
CD48-202ENST00000368046 EREGO14944 169 aa7.2□□□□□ -1.26
CD48-202ENST00000368046 GHRHP01286 108 aa7.2□□□□□ -1.26
CD48-202ENST00000368046 GIG44P09565 113 aaPredicted RBP7.2□□□□□ -1.26
CD48-202ENST00000368046 RPL7P18124 248 aaKnown RBP7.2□□□□□ -1.26
CD48-202ENST00000368046 ATF4P18848 351 aaPredicted RBP7.2□□□□□ -1.26
CD48-202ENST00000368046 RPL29P47914 159 aaKnown RBP7.2□□□□□ -1.26
CD48-202ENST00000368046 H2BFSP57053 126 aa7.2□□□□□ -1.26
CD48-202ENST00000368046 NHLH2Q02577 135 aa7.2□□□□□ -1.26
CD48-202ENST00000368046 SPATA31B1PQ5VZV4 182 aa7.2□□□□□ -1.26
CD48-202ENST00000368046 ZFAND6Q6FIF0 208 aa7.2□□□□□ -1.26
CD48-202ENST00000368046 OR11H2Q8NH07 326 aa7.2□□□□□ -1.26
CD48-202ENST00000368046 CHAC2Q8WUX2 184 aa7.2□□□□□ -1.26
CD48-202ENST00000368046 RNF126Q9BV68 326 aa7.2□□□□□ -1.26
CD48-202ENST00000368046 DNAJC4Q9NNZ3 241 aa7.2□□□□□ -1.26
CD48-202ENST00000368046 WDR83OSQ9Y284 106 aa7.2□□□□□ -1.26
CD48-202ENST00000368046 PTTG1O95997 202 aa7.19□□□□□ -1.26
CD48-202ENST00000368046 HLA-DRB4P13762 266 aa7.19□□□□□ -1.26
CD48-202ENST00000368046 LRRC37A5PQ49AS3 106 aa7.19□□□□□ -1.26
CD48-202ENST00000368046 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.19□□□□□ -1.26
CD48-202ENST00000368046 FOXI2Q6ZQN5 318 aa7.19□□□□□ -1.26
CD48-202ENST00000368046 LINC00305Q7Z4B0 112 aa7.19□□□□□ -1.26
CD48-202ENST00000368046 CSNK1G2-AS1Q8NCQ2 148 aa7.19□□□□□ -1.26
CD48-202ENST00000368046 PPP1R1CQ8WVI7 109 aa7.19□□□□□ -1.26
CD48-202ENST00000368046 TMEM37Q8WXS4 190 aa7.19□□□□□ -1.26
CD48-202ENST00000368046 CLUHP3Q96NS8 147 aa7.19□□□□□ -1.26
CD48-202ENST00000368046 UHRF2Q96PU4 802 aa7.19□□□□□ -1.26
CD48-202ENST00000368046 SCRT1Q9BWW7 348 aa7.19□□□□□ -1.26
CD48-202ENST00000368046 C1QTNF4Q9BXJ3 329 aa7.19□□□□□ -1.26
CD48-202ENST00000368046 SAV1Q9H4B6 383 aaPredicted RBP7.19□□□□□ -1.26
CD48-202ENST00000368046 RPRMQ9NS64 109 aa7.19□□□□□ -1.26
CD48-202ENST00000368046 OR5AC2Q9NZP5 309 aa7.19□□□□□ -1.26
CD48-202ENST00000368046 HLA-DRB4X5D2U9 266 aa7.19□□□□□ -1.26
CD48-202ENST00000368046 COX7A2P2O60397 106 aa7.18□□□□□ -1.26
CD48-202ENST00000368046 MPDU1O75352 247 aa7.18□□□□□ -1.26
CD48-202ENST00000368046 MPC2O95563 127 aa7.18□□□□□ -1.26
CD48-202ENST00000368046 EWSR1Q01844 656 aaKnown RBP eCLIP7.18□□□□□ -1.26
CD48-202ENST00000368046 FGL1Q08830 312 aa7.18□□□□□ -1.26
CD48-202ENST00000368046 GDF5OSQ5U4N7 250 aa7.18□□□□□ -1.26
CD48-202ENST00000368046 C10orf113Q5VZT2 155 aa7.18□□□□□ -1.26
CD48-202ENST00000368046 MIC13Q5XKP0 118 aa7.18□□□□□ -1.26
CD48-202ENST00000368046 EBLN2Q6P2I7 272 aa7.18□□□□□ -1.26
CD48-202ENST00000368046 BPIFA4PQ86YQ2 179 aa7.18□□□□□ -1.26
CD48-202ENST00000368046 OR5C1Q8NGR4 320 aa7.18□□□□□ -1.26
CD48-202ENST00000368046 OR1L4Q8NGR5 311 aa7.18□□□□□ -1.26
CD48-202ENST00000368046 KMT2CQ8NEZ4 4911 aaKnown RBP7.17□□□□□ -1.26
CD48-202ENST00000368046 A0A087X0K7 114 aa7.17□□□□□ -1.26
CD48-202ENST00000368046 A0A0J9YX75 114 aa7.17□□□□□ -1.26
CD48-202ENST00000368046 PET100P0DJ07 73 aa7.17□□□□□ -1.26
CD48-202ENST00000368046 DEFB1P60022 68 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms