RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 APELAP0DMC3 54 aa9.52□□□□□ -0.89
USF1-203ENST00000368021 OPRK1P41145 380 aa9.52□□□□□ -0.89
USF1-203ENST00000368021 RIPPLY3P57055 190 aa9.52□□□□□ -0.89
USF1-203ENST00000368021 RAB31Q13636 194 aa9.52□□□□□ -0.89
USF1-203ENST00000368021 RNF151Q2KHN1 245 aa9.52□□□□□ -0.89
USF1-203ENST00000368021 PRIMA1Q86XR5 153 aa9.52□□□□□ -0.89
USF1-203ENST00000368021 TTC9CQ8N5M4 171 aa9.52□□□□□ -0.89
USF1-203ENST00000368021 FNDC4Q9H6D8 234 aaPredicted RBP9.52□□□□□ -0.89
USF1-203ENST00000368021 SDF2L1Q9HCN8 221 aa9.52□□□□□ -0.89
USF1-203ENST00000368021 KCNIP2Q9NS61 270 aa9.52□□□□□ -0.89
USF1-203ENST00000368021 FUT9Q9Y231 359 aa9.52□□□□□ -0.89
USF1-203ENST00000368021 SOX21Q9Y651 276 aaPredicted RBP9.52□□□□□ -0.89
USF1-203ENST00000368021 PFN1P07737 140 aaKnown RBP9.51□□□□□ -0.89
USF1-203ENST00000368021 MFAP2P55001 183 aa9.51□□□□□ -0.89
USF1-203ENST00000368021 ICAM4Q14773 271 aa9.51□□□□□ -0.89
USF1-203ENST00000368021 TMEM219Q86XT9 240 aa9.51□□□□□ -0.89
USF1-203ENST00000368021 SGMS2Q8NHU3 365 aa9.51□□□□□ -0.89
USF1-203ENST00000368021 MGST2Q99735 147 aa9.51□□□□□ -0.89
USF1-203ENST00000368021 FAM103A1Q9BTL3 118 aaKnown RBP9.51□□□□□ -0.89
USF1-203ENST00000368021 WNT10AQ9GZT5 417 aa9.51□□□□□ -0.89
USF1-203ENST00000368021 LAMTOR2Q9Y2Q5 125 aa9.51□□□□□ -0.89
USF1-203ENST00000368021 LOC102723971A0A1B0GUV8 181 aa9.5□□□□□ -0.89
USF1-203ENST00000368021 EGR2P11161 476 aaPredicted RBP9.5□□□□□ -0.89
USF1-203ENST00000368021 HNRNPA3P51991 378 aaKnown RBP9.5□□□□□ -0.89
USF1-203ENST00000368021 DEFB112Q30KQ8 113 aa9.5□□□□□ -0.89
USF1-203ENST00000368021 ASPHD1Q5U4P2 390 aa9.5□□□□□ -0.89
USF1-203ENST00000368021 HSPB9Q9BQS6 159 aa9.5□□□□□ -0.89
USF1-203ENST00000368021 ELOVL1Q9BW60 279 aa9.5□□□□□ -0.89
USF1-203ENST00000368021 GGTLC1Q9BX51 225 aa9.5□□□□□ -0.89
USF1-203ENST00000368021 RPRMQ9NS64 109 aa9.5□□□□□ -0.89
USF1-203ENST00000368021 H7BYZ3 331 aa9.49□□□□□ -0.89
USF1-203ENST00000368021 AMY1AP04745 511 aa9.49□□□□□ -0.89
USF1-203ENST00000368021 DEFA4P12838 97 aa9.49□□□□□ -0.89
USF1-203ENST00000368021 SRSF2Q01130 221 aaKnown RBP9.49□□□□□ -0.89
USF1-203ENST00000368021 MLANAQ16655 118 aa9.49□□□□□ -0.89
USF1-203ENST00000368021 CYP2G1PQ6ZSU1 146 aa9.49□□□□□ -0.89
USF1-203ENST00000368021 BCL6BQ8N143 479 aaPredicted RBP9.49□□□□□ -0.89
USF1-203ENST00000368021 CYB561D1Q8N8Q1 229 aa9.49□□□□□ -0.89
USF1-203ENST00000368021 TMEM116Q8NCL8 245 aa9.49□□□□□ -0.89
USF1-203ENST00000368021 CST9LQ9H4G1 147 aa9.49□□□□□ -0.89
USF1-203ENST00000368021 IGKV1OR2-108A0A075B7D4 117 aa9.49□□□□□ -0.89
USF1-203ENST00000368021 IER3P46695 156 aa9.49□□□□□ -0.89
USF1-203ENST00000368021 CRIP2P52943 208 aaPredicted RBP9.49□□□□□ -0.89
USF1-203ENST00000368021 ELLP55199 621 aaPredicted RBP9.49□□□□□ -0.89
USF1-203ENST00000368021 SUMO1P63165 101 aaKnown RBP9.49□□□□□ -0.89
USF1-203ENST00000368021 FFAR4Q5NUL3 377 aa9.49□□□□□ -0.89
USF1-203ENST00000368021 ACSM6Q6P461 480 aa9.49□□□□□ -0.89
USF1-203ENST00000368021 OR2T6Q8NHC8 308 aa9.49□□□□□ -0.89
USF1-203ENST00000368021 SMPXQ9UHP9 88 aa9.49□□□□□ -0.89
USF1-203ENST00000368021 MDFIC2A0A1B0GVS7 189 aa9.48□□□□□ -0.89
USF1-203ENST00000368021 I3L2K1 104 aa9.48□□□□□ -0.89
USF1-203ENST00000368021 ATP6V0E1O15342 81 aa9.48□□□□□ -0.89
USF1-203ENST00000368021 MT-CO2P00403 227 aa9.48□□□□□ -0.89
USF1-203ENST00000368021 SCGB2A2Q13296 93 aa9.48□□□□□ -0.89
USF1-203ENST00000368021 LY6EQ16553 131 aa9.48□□□□□ -0.89
USF1-203ENST00000368021 KLK9Q2XQG4 91 aa9.48□□□□□ -0.89
USF1-203ENST00000368021 SPSB3Q6PJ21 355 aa9.48□□□□□ -0.89
USF1-203ENST00000368021 C19orf35Q6ZS72 473 aa9.48□□□□□ -0.89
USF1-203ENST00000368021 THAP8Q8NA92 274 aa9.48□□□□□ -0.89
USF1-203ENST00000368021 OR51G1Q8NGK1 321 aa9.48□□□□□ -0.89
USF1-203ENST00000368021 CMTM2Q8TAZ6 248 aa9.48□□□□□ -0.89
USF1-203ENST00000368021 TXN2Q99757 166 aa9.48□□□□□ -0.89
USF1-203ENST00000368021 VSIRQ9H7M9 311 aa9.48□□□□□ -0.89
USF1-203ENST00000368021 KLK9Q9UKQ9 250 aa9.48□□□□□ -0.89
USF1-203ENST00000368021 PXMP4Q9Y6I8 212 aa9.48□□□□□ -0.89
USF1-203ENST00000368021 IGLV11-55A0A075B6I3 123 aa9.47□□□□□ -0.89
USF1-203ENST00000368021 TMEM250H0YL14 139 aa9.47□□□□□ -0.89
USF1-203ENST00000368021 GALR1P47211 349 aa9.47□□□□□ -0.89
USF1-203ENST00000368021 FGF8P55075 233 aaPredicted RBP9.47□□□□□ -0.89
USF1-203ENST00000368021 PRR20EP86478 221 aa9.47□□□□□ -0.89
USF1-203ENST00000368021 PRR20CP86479 221 aa9.47□□□□□ -0.89
USF1-203ENST00000368021 PRR20DP86480 221 aa9.47□□□□□ -0.89
USF1-203ENST00000368021 PRR20BP86481 221 aa9.47□□□□□ -0.89
USF1-203ENST00000368021 PRR20AP86496 221 aa9.47□□□□□ -0.89
USF1-203ENST00000368021 BATFQ16520 125 aa9.47□□□□□ -0.89
USF1-203ENST00000368021 COX19Q49B96 90 aa9.47□□□□□ -0.89
USF1-203ENST00000368021 Q6YL49 198 aa9.47□□□□□ -0.89
USF1-203ENST00000368021 RPP25LQ8N5L8 163 aaKnown RBP9.47□□□□□ -0.89
USF1-203ENST00000368021 FAM110DQ8TAY7 271 aaPredicted RBP9.47□□□□□ -0.89
USF1-203ENST00000368021 MBD3L1Q8WWY6 194 aa9.47□□□□□ -0.89
USF1-203ENST00000368021 NPIPB3Q92617 1050 aa9.47□□□□□ -0.89
USF1-203ENST00000368021 ZNF48Q96MX3 618 aaPredicted RBP9.47□□□□□ -0.89
USF1-203ENST00000368021 FANCD2OSQ96PS1 177 aa9.47□□□□□ -0.89
USF1-203ENST00000368021 ZNF586Q9NXT0 402 aa9.47□□□□□ -0.89
USF1-203ENST00000368021 THYN1Q9P016 225 aa9.47□□□□□ -0.89
USF1-203ENST00000368021 IGHV4-59P01825 116 aa9.47□□□□□ -0.89
USF1-203ENST00000368021 BCL2P10415 239 aa9.47□□□□□ -0.89
USF1-203ENST00000368021 PMCHL1Q16048 86 aa9.47□□□□□ -0.89
USF1-203ENST00000368021 STPG3Q8N7X2 389 aa9.47□□□□□ -0.89
USF1-203ENST00000368021 OR10G9Q8NGN4 311 aa9.47□□□□□ -0.89
USF1-203ENST00000368021 OR10G7Q8NGN6 311 aa9.47□□□□□ -0.89
USF1-203ENST00000368021 SLC39A9Q9NUM3 307 aa9.47□□□□□ -0.89
USF1-203ENST00000368021 K7EIM0 57 aa9.46□□□□□ -0.9
USF1-203ENST00000368021 IGHG2P01859 326 aa9.46□□□□□ -0.9
USF1-203ENST00000368021 IGF1P05019 195 aa9.46□□□□□ -0.9
USF1-203ENST00000368021 CDC34P49427 236 aaPredicted RBP9.46□□□□□ -0.9
USF1-203ENST00000368021 ZNF726P1Q15940 193 aa9.46□□□□□ -0.9
USF1-203ENST00000368021 MIC13Q5XKP0 118 aa9.46□□□□□ -0.9
USF1-203ENST00000368021 UNQ5815/PRO19632Q6UWF5 114 aa9.46□□□□□ -0.9
USF1-203ENST00000368021 OR5AU1Q8NGC0 362 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms