RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 ENY2Q9NPA8 101 aa5.82□□□□□ -1.48
YBX3-204ENST00000366290 MRPL36Q9P0J6 103 aaKnown RBP5.82□□□□□ -1.48
YBX3-204ENST00000366290 PEF1Q9UBV8 284 aaKnown RBP5.82□□□□□ -1.48
YBX3-204ENST00000366290 ZNF256Q9Y2P7 627 aaPredicted RBP5.82□□□□□ -1.48
YBX3-204ENST00000366290 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.81□□□□□ -1.48
YBX3-204ENST00000366290 H3BP45 60 aa5.81□□□□□ -1.48
YBX3-204ENST00000366290 SSSCA1O60232 199 aa5.81□□□□□ -1.48
YBX3-204ENST00000366290 CCNKO75909 580 aa5.81□□□□□ -1.48
YBX3-204ENST00000366290 MT-CO2P00403 227 aa5.81□□□□□ -1.48
YBX3-204ENST00000366290 IGLV1-51P01701 117 aa5.81□□□□□ -1.48
YBX3-204ENST00000366290 IGHV3-48P01763 117 aa5.81□□□□□ -1.48
YBX3-204ENST00000366290 CFC1BP0CG36 223 aa5.81□□□□□ -1.48
YBX3-204ENST00000366290 CFC1P0CG37 223 aa5.81□□□□□ -1.48
YBX3-204ENST00000366290 SNCAP37840 140 aa5.81□□□□□ -1.48
YBX3-204ENST00000366290 RRAS2P62070 204 aaPredicted RBP5.81□□□□□ -1.48
YBX3-204ENST00000366290 ATP5G2Q06055 141 aa5.81□□□□□ -1.48
YBX3-204ENST00000366290 OR9G4Q8NGQ1 327 aa5.81□□□□□ -1.48
YBX3-204ENST00000366290 OR1L6Q8NGR2 347 aa5.81□□□□□ -1.48
YBX3-204ENST00000366290 VN1R17PQ8TDU5 208 aa5.81□□□□□ -1.48
YBX3-204ENST00000366290 SMIM8Q96KF7 97 aa5.81□□□□□ -1.48
YBX3-204ENST00000366290 NMES1Q9C002 83 aa5.81□□□□□ -1.48
YBX3-204ENST00000366290 U3KQ87 197 aa5.81□□□□□ -1.48
YBX3-204ENST00000366290 TRAV14DV4A0A0A6YYC5 116 aa5.8□□□□□ -1.48
YBX3-204ENST00000366290 PPP5D1E7EU14 171 aa5.8□□□□□ -1.48
YBX3-204ENST00000366290 G3V3Q6 166 aa5.8□□□□□ -1.48
YBX3-204ENST00000366290 SAP30O75446 220 aa5.8□□□□□ -1.48
YBX3-204ENST00000366290 IFNA10P01566 189 aa5.8□□□□□ -1.48
YBX3-204ENST00000366290 IGKV3-20P01619 116 aa5.8□□□□□ -1.48
YBX3-204ENST00000366290 FCGR2BP31994 310 aaPredicted RBP5.8□□□□□ -1.48
YBX3-204ENST00000366290 TMEM14EPQ6UXP3 125 aa5.8□□□□□ -1.48
YBX3-204ENST00000366290 CLEC19AQ6UXS0 136 aa5.8□□□□□ -1.48
YBX3-204ENST00000366290 OR10G8Q8NGN5 311 aa5.8□□□□□ -1.48
YBX3-204ENST00000366290 RNASEH2CQ8TDP1 164 aaKnown RBP5.8□□□□□ -1.48
YBX3-204ENST00000366290 PPP1R1CQ8WVI7 109 aa5.8□□□□□ -1.48
YBX3-204ENST00000366290 EEF1AKMT3Q96AZ1 226 aa5.8□□□□□ -1.48
YBX3-204ENST00000366290 CIB3Q96Q77 187 aaPredicted RBP5.8□□□□□ -1.48
YBX3-204ENST00000366290 RAB40CQ96S21 281 aa5.8□□□□□ -1.48
YBX3-204ENST00000366290 LITAFQ99732 161 aa5.8□□□□□ -1.48
YBX3-204ENST00000366290 ALKBH7Q9BT30 221 aaPredicted RBP5.8□□□□□ -1.48
YBX3-204ENST00000366290 RNF126Q9BV68 326 aa5.8□□□□□ -1.48
YBX3-204ENST00000366290 MED28Q9H204 178 aa5.8□□□□□ -1.48
YBX3-204ENST00000366290 C21orf62Q9NYP8 219 aa5.8□□□□□ -1.48
YBX3-204ENST00000366290 OR5AC2Q9NZP5 309 aa5.8□□□□□ -1.48
YBX3-204ENST00000366290 THYN1Q9P016 225 aa5.8□□□□□ -1.48
YBX3-204ENST00000366290 LSM5Q9Y4Y9 91 aaKnown RBP5.8□□□□□ -1.48
YBX3-204ENST00000366290 TRBV7-1A0A0A6YYK4 115 aa5.79□□□□□ -1.48
YBX3-204ENST00000366290 E5RGE8 158 aa5.79□□□□□ -1.48
YBX3-204ENST00000366290 LGALS9O00182 355 aa5.79□□□□□ -1.48
YBX3-204ENST00000366290 CORTO00230 105 aa5.79□□□□□ -1.48
YBX3-204ENST00000366290 TSC22D2O75157 780 aa5.79□□□□□ -1.48
YBX3-204ENST00000366290 DEDDO75618 318 aa5.79□□□□□ -1.48
YBX3-204ENST00000366290 MPC2O95563 127 aa5.79□□□□□ -1.48
YBX3-204ENST00000366290 GPR183P32249 361 aa5.79□□□□□ -1.48
YBX3-204ENST00000366290 OPRK1P41145 380 aa5.79□□□□□ -1.48
YBX3-204ENST00000366290 SUB1P53999 127 aaKnown RBP eCLIP5.79□□□□□ -1.48
YBX3-204ENST00000366290 ATP5IP56385 69 aaPredicted RBP5.79□□□□□ -1.48
YBX3-204ENST00000366290 SYNJ2BPP57105 145 aa5.79□□□□□ -1.48
YBX3-204ENST00000366290 TAS2R30P59541 319 aa5.79□□□□□ -1.48
YBX3-204ENST00000366290 S100A10P60903 97 aa5.79□□□□□ -1.48
YBX3-204ENST00000366290 RPEL1Q2QD12 228 aa5.79□□□□□ -1.48
YBX3-204ENST00000366290 Q5BKY6 102 aa5.79□□□□□ -1.48
YBX3-204ENST00000366290 DEFB121Q5J5C9 76 aa5.79□□□□□ -1.48
YBX3-204ENST00000366290 SPANXN5Q5MJ07 72 aa5.79□□□□□ -1.48
YBX3-204ENST00000366290 PRSS54Q6PEW0 395 aa5.79□□□□□ -1.48
YBX3-204ENST00000366290 GPHB5Q86YW7 130 aa5.79□□□□□ -1.48
YBX3-204ENST00000366290 PINX1Q96BK5 328 aaKnown RBP5.79□□□□□ -1.48
YBX3-204ENST00000366290 CXorf58Q96LI9 332 aa5.79□□□□□ -1.48
YBX3-204ENST00000366290 ATP6V0BQ99437 205 aa5.79□□□□□ -1.48
YBX3-204ENST00000366290 CHRDL1Q9BU40 450 aa5.79□□□□□ -1.48
YBX3-204ENST00000366290 ZNF436Q9C0F3 470 aaPredicted RBP5.79□□□□□ -1.48
YBX3-204ENST00000366290 PSENENQ9NZ42 101 aa5.79□□□□□ -1.48
YBX3-204ENST00000366290 DYNC2H1Q8NCM8 4307 aaKnown RBP5.79□□□□□ -1.48
YBX3-204ENST00000366290 A0A1B0GVG6 124 aa5.78□□□□□ -1.48
YBX3-204ENST00000366290 IGSF23A1L1A6 192 aa5.78□□□□□ -1.48
YBX3-204ENST00000366290 FAM24AA6NFZ4 105 aa5.78□□□□□ -1.48
YBX3-204ENST00000366290 OR2T8A6NH00 312 aa5.78□□□□□ -1.48
YBX3-204ENST00000366290 CYB5BO43169 146 aa5.78□□□□□ -1.48
YBX3-204ENST00000366290 TGOLN2O43493 480 aa5.78□□□□□ -1.48
YBX3-204ENST00000366290 IFNA4P05014 189 aa5.78□□□□□ -1.48
YBX3-204ENST00000366290 CTSGP08311 255 aa5.78□□□□□ -1.48
YBX3-204ENST00000366290 GIPP09681 153 aaPredicted RBP5.78□□□□□ -1.48
YBX3-204ENST00000366290 METTL15P1P0C7V9 234 aa5.78□□□□□ -1.48
YBX3-204ENST00000366290 GP9P14770 177 aa5.78□□□□□ -1.48
YBX3-204ENST00000366290 CYCSP99999 105 aaKnown RBP5.78□□□□□ -1.48
YBX3-204ENST00000366290 LRRC37A5PQ49AS3 106 aa5.78□□□□□ -1.48
YBX3-204ENST00000366290 SLC16A13Q7RTY0 426 aa5.78□□□□□ -1.48
YBX3-204ENST00000366290 NOTCH2NLQ7Z3S9 236 aa5.78□□□□□ -1.48
YBX3-204ENST00000366290 OR2K2Q8NGT1 345 aa5.78□□□□□ -1.48
YBX3-204ENST00000366290 OR4X1Q8NH49 305 aa5.78□□□□□ -1.48
YBX3-204ENST00000366290 GATAD1Q8WUU5 269 aa5.78□□□□□ -1.48
YBX3-204ENST00000366290 ZC4H2Q9NQZ6 224 aa5.78□□□□□ -1.48
YBX3-204ENST00000366290 LYRM2Q9NU23 88 aaPredicted RBP5.78□□□□□ -1.48
YBX3-204ENST00000366290 STRAPQ9Y3F4 350 aaKnown RBP5.78□□□□□ -1.48
YBX3-204ENST00000366290 PYGO1Q9Y3Y4 419 aa5.78□□□□□ -1.48
YBX3-204ENST00000366290 IGKV1D-37A0A075B6S9 117 aa5.77□□□□□ -1.49
YBX3-204ENST00000366290 IGKV1OR2-108A0A075B7D4 117 aa5.77□□□□□ -1.49
YBX3-204ENST00000366290 A8MWP6 167 aa5.77□□□□□ -1.49
YBX3-204ENST00000366290 GGCTO75223 188 aaKnown RBP5.77□□□□□ -1.49
YBX3-204ENST00000366290 CLN5O75503 358 aa5.77□□□□□ -1.49
YBX3-204ENST00000366290 IGKV1-17P01599 117 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms