RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 CD14P08571 375 aa-0.44□□□□□ -2.48
RNU4-28P-201ENST00000364739 SPATA45Q537H7 98 aa-0.44□□□□□ -2.48
RNU4-28P-201ENST00000364739 OR10K1Q8NGX5 313 aa-0.44□□□□□ -2.48
RNU4-28P-201ENST00000364739 CMSS1Q9BQ75 279 aaKnown RBP-0.44□□□□□ -2.48
RNU4-28P-201ENST00000364739 NOSIPQ9Y314 301 aaKnown RBP-0.44□□□□□ -2.48
RNU4-28P-201ENST00000364739 TENM2Q9NT68 2774 aa-0.44□□□□□ -2.48
RNU4-28P-201ENST00000364739 BCORL1Q5H9F3 1711 aa-0.44□□□□□ -2.48
RNU4-28P-201ENST00000364739 LAMA5O15230 3695 aa-0.44□□□□□ -2.48
RNU4-28P-201ENST00000364739 SETD2Q9BYW2 2564 aaPredicted RBP-0.45□□□□□ -2.48
RNU4-28P-201ENST00000364739 SPTBN4Q9H254 2564 aa-0.45□□□□□ -2.48
RNU4-28P-201ENST00000364739 SONP18583 2426 aaKnown RBP-0.45□□□□□ -2.48
RNU4-28P-201ENST00000364739 HIVEP1P15822 2718 aa-0.45□□□□□ -2.48
RNU4-28P-201ENST00000364739 ERC2-IT1O76042 136 aa-0.45□□□□□ -2.48
RNU4-28P-201ENST00000364739 COX7CP15954 63 aa-0.45□□□□□ -2.48
RNU4-28P-201ENST00000364739 PPIBP23284 216 aaKnown RBP-0.45□□□□□ -2.48
RNU4-28P-201ENST00000364739 SRP14P37108 136 aaKnown RBP-0.45□□□□□ -2.48
RNU4-28P-201ENST00000364739 QRFPP83859 136 aa-0.45□□□□□ -2.48
RNU4-28P-201ENST00000364739 Q86TA4 180 aa-0.45□□□□□ -2.48
RNU4-28P-201ENST00000364739 DDI1Q8WTU0 396 aa-0.45□□□□□ -2.48
RNU4-28P-201ENST00000364739 CANT1Q8WVQ1 401 aa-0.45□□□□□ -2.48
RNU4-28P-201ENST00000364739 LYSMD1Q96S90 227 aa-0.45□□□□□ -2.48
RNU4-28P-201ENST00000364739 UQCC1Q9NVA1 299 aa-0.45□□□□□ -2.48
RNU4-28P-201ENST00000364739 PDZD2O15018 2839 aa-0.45□□□□□ -2.48
RNU4-28P-201ENST00000364739 LAMA2P24043 3122 aaKnown RBP-0.46□□□□□ -2.48
RNU4-28P-201ENST00000364739 E7EUB6 86 aa-0.46□□□□□ -2.48
RNU4-28P-201ENST00000364739 NDUFB3O43676 98 aa-0.46□□□□□ -2.48
RNU4-28P-201ENST00000364739 SERPINA6P08185 405 aa-0.46□□□□□ -2.48
RNU4-28P-201ENST00000364739 DSCR4P56555 118 aaPredicted RBP-0.46□□□□□ -2.48
RNU4-28P-201ENST00000364739 Q6Q795 121 aa-0.46□□□□□ -2.48
RNU4-28P-201ENST00000364739 CFAP53Q96M91 514 aa-0.46□□□□□ -2.48
RNU4-28P-201ENST00000364739 LINC00467Q9BRT7 94 aa-0.46□□□□□ -2.48
RNU4-28P-201ENST00000364739 TMEM126AQ9H061 195 aa-0.46□□□□□ -2.48
RNU4-28P-201ENST00000364739 TVP23BQ9NYZ1 205 aa-0.46□□□□□ -2.48
RNU4-28P-201ENST00000364739 ZANQ9Y493 2812 aa-0.46□□□□□ -2.48
RNU4-28P-201ENST00000364739 ABCA13Q86UQ4 5058 aa-0.46□□□□□ -2.48
RNU4-28P-201ENST00000364739 CELSR1Q9NYQ6 3014 aa-0.46□□□□□ -2.48
RNU4-28P-201ENST00000364739 SETXQ7Z333 2677 aaKnown RBP-0.47□□□□□ -2.48
RNU4-28P-201ENST00000364739 NUP98P52948 1817 aa-0.47□□□□□ -2.48
RNU4-28P-201ENST00000364739 A0A087WUJ7 227 aa-0.47□□□□□ -2.48
RNU4-28P-201ENST00000364739 CXCL8P10145 99 aa-0.47□□□□□ -2.48
RNU4-28P-201ENST00000364739 AP3S2P59780 193 aa-0.47□□□□□ -2.48
RNU4-28P-201ENST00000364739 MAGOHP61326 146 aaKnown RBP-0.47□□□□□ -2.48
RNU4-28P-201ENST00000364739 SLC25A21Q9BQT8 299 aaPredicted RBP-0.47□□□□□ -2.48
RNU4-28P-201ENST00000364739 LY96Q9Y6Y9 160 aa-0.47□□□□□ -2.48
RNU4-28P-201ENST00000364739 NF1P21359 2839 aa-0.47□□□□□ -2.49
RNU4-28P-201ENST00000364739 A8MWV9 139 aa-0.48□□□□□ -2.49
RNU4-28P-201ENST00000364739 C8GP07360 202 aa-0.48□□□□□ -2.49
RNU4-28P-201ENST00000364739 KRR1Q13601 381 aaKnown RBP-0.48□□□□□ -2.49
RNU4-28P-201ENST00000364739 COTL1Q14019 142 aa-0.48□□□□□ -2.49
RNU4-28P-201ENST00000364739 C1orf134Q5TEV5 83 aa-0.48□□□□□ -2.49
RNU4-28P-201ENST00000364739 OR6V1Q8N148 313 aa-0.48□□□□□ -2.49
RNU4-28P-201ENST00000364739 PLAC4Q8WY50 150 aa-0.48□□□□□ -2.49
RNU4-28P-201ENST00000364739 OR52A1Q9UKL2 312 aa-0.48□□□□□ -2.49
RNU4-28P-201ENST00000364739 UBR5O95071 2799 aaPredicted RBP-0.48□□□□□ -2.49
RNU4-28P-201ENST00000364739 DOCK4Q8N1I0 1966 aa-0.48□□□□□ -2.49
RNU4-28P-201ENST00000364739 DSPP15924 2871 aaKnown RBP-0.49□□□□□ -2.49
RNU4-28P-201ENST00000364739 COL24A1Q17RW2 1714 aa-0.49□□□□□ -2.49
RNU4-28P-201ENST00000364739 ACANP16112 2415 aa-0.49□□□□□ -2.49
RNU4-28P-201ENST00000364739 ZNF727A8MUV8 499 aa-0.49□□□□□ -2.49
RNU4-28P-201ENST00000364739 FXYD6P3P58550 94 aa-0.49□□□□□ -2.49
RNU4-28P-201ENST00000364739 IAH1Q2TAA2 248 aaPredicted RBP-0.49□□□□□ -2.49
RNU4-28P-201ENST00000364739 RAB37Q96AX2 223 aa-0.49□□□□□ -2.49
RNU4-28P-201ENST00000364739 BORCS7Q96B45 105 aa-0.49□□□□□ -2.49
RNU4-28P-201ENST00000364739 PBOV1Q9GZY1 135 aa-0.49□□□□□ -2.49
RNU4-28P-201ENST00000364739 RNF122Q9H9V4 155 aa-0.49□□□□□ -2.49
RNU4-28P-201ENST00000364739 PIK3C2GO75747 1445 aa-0.49□□□□□ -2.49
RNU4-28P-201ENST00000364739 FAM208BQ5VWN6 2430 aa-0.49□□□□□ -2.49
RNU4-28P-201ENST00000364739 HIVEP3Q5T1R4 2406 aa-0.5□□□□□ -2.49
RNU4-28P-201ENST00000364739 TRGV10A0A0A0MS01 117 aa-0.5□□□□□ -2.49
RNU4-28P-201ENST00000364739 J3QRK9 145 aa-0.5□□□□□ -2.49
RNU4-28P-201ENST00000364739 M0R036 132 aa-0.5□□□□□ -2.49
RNU4-28P-201ENST00000364739 CETN3O15182 167 aa-0.5□□□□□ -2.49
RNU4-28P-201ENST00000364739 CCL4P13236 92 aa-0.5□□□□□ -2.49
RNU4-28P-201ENST00000364739 CDK6Q00534 326 aa-0.5□□□□□ -2.49
RNU4-28P-201ENST00000364739 PARD6GQ9BYG4 376 aaPredicted RBP-0.5□□□□□ -2.49
RNU4-28P-201ENST00000364739 NCOA1Q15788 1441 aa-0.5□□□□□ -2.49
RNU4-28P-201ENST00000364739 BIRC6Q9NR09 4857 aa-0.5□□□□□ -2.49
RNU4-28P-201ENST00000364739 STAB2Q8WWQ8 2551 aa-0.51□□□□□ -2.49
RNU4-28P-201ENST00000364739 SERPINB9P50453 376 aa-0.51□□□□□ -2.49
RNU4-28P-201ENST00000364739 FXYD4P59646 89 aa-0.51□□□□□ -2.49
RNU4-28P-201ENST00000364739 LYRM7Q5U5X0 104 aa-0.51□□□□□ -2.49
RNU4-28P-201ENST00000364739 C22orf39Q6P5X5 142 aa-0.51□□□□□ -2.49
RNU4-28P-201ENST00000364739 ZNF431Q8TF32 576 aaPredicted RBP-0.51□□□□□ -2.49
RNU4-28P-201ENST00000364739 GLTPQ9NZD2 209 aa-0.51□□□□□ -2.49
RNU4-28P-201ENST00000364739 OPTCQ9UBM4 332 aa-0.51□□□□□ -2.49
RNU4-28P-201ENST00000364739 PRELID3BQ9Y3B1 194 aa-0.51□□□□□ -2.49
RNU4-28P-201ENST00000364739 DNHD1Q96M86 4753 aa-0.51□□□□□ -2.49
RNU4-28P-201ENST00000364739 EP300Q09472 2414 aaPredicted RBP-0.52□□□□□ -2.49
RNU4-28P-201ENST00000364739 RTL1A6NKG5 1358 aa-0.52□□□□□ -2.49
RNU4-28P-201ENST00000364739 M0R233 179 aa-0.52□□□□□ -2.49
RNU4-28P-201ENST00000364739 KPNA3O00505 521 aaPredicted RBP-0.52□□□□□ -2.49
RNU4-28P-201ENST00000364739 LYPLA2O95372 231 aa-0.52□□□□□ -2.49
RNU4-28P-201ENST00000364739 PIGPP57054 158 aa-0.52□□□□□ -2.49
RNU4-28P-201ENST00000364739 Q6ZQY7 126 aa-0.52□□□□□ -2.49
RNU4-28P-201ENST00000364739 PXT1Q8NFP0 134 aa-0.52□□□□□ -2.49
RNU4-28P-201ENST00000364739 MUCL1Q96DR8 90 aa-0.52□□□□□ -2.49
RNU4-28P-201ENST00000364739 NUP210LQ5VU65 1888 aa-0.52□□□□□ -2.49
RNU4-28P-201ENST00000364739 ABCA12Q86UK0 2595 aa-0.52□□□□□ -2.49
RNU4-28P-201ENST00000364739 CACNA1HO95180 2353 aa-0.53□□□□□ -2.49
RNU4-28P-201ENST00000364739 RFX7Q2KHR2 1363 aa-0.53□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 136.8 ms