RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 SLC25A48Q6ZT89 311 aaKnown RBP11.27□□□□□ -0.61
COL6A1-201ENST00000361866 YPEL4Q96NS1 127 aa11.27□□□□□ -0.61
COL6A1-201ENST00000361866 SLC25A39Q9BZJ4 359 aaPredicted RBP11.27□□□□□ -0.61
COL6A1-201ENST00000361866 NAV3Q8IVL0 2385 aa11.27□□□□□ -0.61
COL6A1-201ENST00000361866 IGHV3OR16-10A0A075B7F0 116 aa11.27□□□□□ -0.61
COL6A1-201ENST00000361866 IGKV2-40A0A087WW87 121 aaPredicted RBP11.27□□□□□ -0.61
COL6A1-201ENST00000361866 A0A1W2PPI3 338 aa11.27□□□□□ -0.61
COL6A1-201ENST00000361866 GAGE12BA1L429 117 aa11.27□□□□□ -0.61
COL6A1-201ENST00000361866 IGKV2D-40P01614 121 aaPredicted RBP11.27□□□□□ -0.61
COL6A1-201ENST00000361866 VWC2Q2TAL6 325 aa11.27□□□□□ -0.61
COL6A1-201ENST00000361866 ZNF474Q6S9Z5 364 aaPredicted RBP11.27□□□□□ -0.61
COL6A1-201ENST00000361866 LYPD2Q6UXB3 125 aa11.27□□□□□ -0.61
COL6A1-201ENST00000361866 C11orf53Q8IXP5 236 aa11.27□□□□□ -0.61
COL6A1-201ENST00000361866 OR5AN1Q8NGI8 311 aa11.27□□□□□ -0.61
COL6A1-201ENST00000361866 TANC2Q9HCD6 1990 aa11.27□□□□□ -0.61
COL6A1-201ENST00000361866 NDUFA3O95167 84 aa11.27□□□□□ -0.61
COL6A1-201ENST00000361866 DPM3Q9P2X0 92 aa11.27□□□□□ -0.61
COL6A1-201ENST00000361866 ITGB1BP1O14713 200 aa11.26□□□□□ -0.61
COL6A1-201ENST00000361866 TGFAP01135 160 aa11.26□□□□□ -0.61
COL6A1-201ENST00000361866 HBDP02042 147 aa11.26□□□□□ -0.61
COL6A1-201ENST00000361866 DIAPH2-AS1Q14236 149 aa11.26□□□□□ -0.61
COL6A1-201ENST00000361866 AMN1Q8IY45 258 aa11.26□□□□□ -0.61
COL6A1-201ENST00000361866 OR1N2Q8NGR9 330 aa11.26□□□□□ -0.61
COL6A1-201ENST00000361866 TMEM167AQ8TBQ9 72 aa11.26□□□□□ -0.61
COL6A1-201ENST00000361866 PRUNE2Q8WUY3 3088 aa11.26□□□□□ -0.61
COL6A1-201ENST00000361866 TIMM23O14925 209 aa11.26□□□□□ -0.61
COL6A1-201ENST00000361866 COL8A2P25067 703 aa11.26□□□□□ -0.61
COL6A1-201ENST00000361866 SSBP2P81877 361 aaPredicted RBP11.26□□□□□ -0.61
COL6A1-201ENST00000361866 PSG9Q00887 426 aa11.26□□□□□ -0.61
COL6A1-201ENST00000361866 WT1-ASQ06250 92 aa11.26□□□□□ -0.61
COL6A1-201ENST00000361866 PHLDA3Q9Y5J5 127 aa11.26□□□□□ -0.61
COL6A1-201ENST00000361866 NOTCH2Q04721 2471 aa11.26□□□□□ -0.61
COL6A1-201ENST00000361866 C19orf67A6NJJ6 358 aa11.26□□□□□ -0.61
COL6A1-201ENST00000361866 OR11H12B2RN74 326 aa11.26□□□□□ -0.61
COL6A1-201ENST00000361866 TDGF1P13385 188 aa11.26□□□□□ -0.61
COL6A1-201ENST00000361866 PRR20EP86478 221 aa11.26□□□□□ -0.61
COL6A1-201ENST00000361866 PRR20CP86479 221 aa11.26□□□□□ -0.61
COL6A1-201ENST00000361866 PRR20DP86480 221 aa11.26□□□□□ -0.61
COL6A1-201ENST00000361866 PRR20BP86481 221 aa11.26□□□□□ -0.61
COL6A1-201ENST00000361866 PRR20AP86496 221 aa11.26□□□□□ -0.61
COL6A1-201ENST00000361866 C17orf58Q2M2W7 97 aa11.26□□□□□ -0.61
COL6A1-201ENST00000361866 LYZL1Q6UWQ5 148 aa11.26□□□□□ -0.61
COL6A1-201ENST00000361866 OR11H1Q8NG94 326 aa11.26□□□□□ -0.61
COL6A1-201ENST00000361866 OR11H2Q8NH07 326 aa11.26□□□□□ -0.61
COL6A1-201ENST00000361866 MRPS16Q9Y3D3 137 aaKnown RBP11.26□□□□□ -0.61
COL6A1-201ENST00000361866 TRAV30A0A087WSZ9 112 aa11.25□□□□□ -0.61
COL6A1-201ENST00000361866 MORN5Q5VZ52 161 aa11.25□□□□□ -0.61
COL6A1-201ENST00000361866 C11orf52Q96A22 123 aa11.25□□□□□ -0.61
COL6A1-201ENST00000361866 TPSG1Q9NRR2 321 aa11.25□□□□□ -0.61
COL6A1-201ENST00000361866 IFI27P40305 119 aaPredicted RBP11.25□□□□□ -0.61
COL6A1-201ENST00000361866 JKAMPQ9P055 326 aa11.25□□□□□ -0.61
COL6A1-201ENST00000361866 GAGE1Q13065 139 aa11.25□□□□□ -0.61
COL6A1-201ENST00000361866 SPRNQ5BIV9 151 aa11.25□□□□□ -0.61
COL6A1-201ENST00000361866 RPS20P60866 119 aaKnown RBP11.24□□□□□ -0.61
COL6A1-201ENST00000361866 KRTAP27-1Q3LI81 207 aa11.24□□□□□ -0.61
COL6A1-201ENST00000361866 CNTFRP26992 372 aa11.24□□□□□ -0.61
COL6A1-201ENST00000361866 CEACAM8P31997 349 aaPredicted RBP11.24□□□□□ -0.61
COL6A1-201ENST00000361866 CFHR2P36980 270 aa11.24□□□□□ -0.61
COL6A1-201ENST00000361866 OCIAD2Q56VL3 154 aa11.24□□□□□ -0.61
COL6A1-201ENST00000361866 SLC25A2Q9BXI2 301 aa11.24□□□□□ -0.61
COL6A1-201ENST00000361866 GTSF1LQ9H1H1 148 aa11.24□□□□□ -0.61
COL6A1-201ENST00000361866 CST9LQ9H4G1 147 aa11.24□□□□□ -0.61
COL6A1-201ENST00000361866 RASL11AQ6T310 242 aa11.24□□□□□ -0.61
COL6A1-201ENST00000361866 TTC9CQ8N5M4 171 aa11.24□□□□□ -0.61
COL6A1-201ENST00000361866 RNASE6Q93091 150 aaKnown RBP11.24□□□□□ -0.61
COL6A1-201ENST00000361866 METTL26Q96S19 204 aa11.24□□□□□ -0.61
COL6A1-201ENST00000361866 TECTAO75443 2155 aa11.24□□□□□ -0.61
COL6A1-201ENST00000361866 A0A1B0GWB2 263 aa11.24□□□□□ -0.61
COL6A1-201ENST00000361866 LY6HO94772 140 aa11.24□□□□□ -0.61
COL6A1-201ENST00000361866 FAM74A4Q5TZK3 123 aa11.24□□□□□ -0.61
COL6A1-201ENST00000361866 RNASE8Q8TDE3 154 aaKnown RBP11.24□□□□□ -0.61
COL6A1-201ENST00000361866 APOMO95445 188 aa11.23□□□□□ -0.61
COL6A1-201ENST00000361866 HERVK_113P61574 105 aa11.23□□□□□ -0.61
COL6A1-201ENST00000361866 EBLN2Q6P2I7 272 aa11.23□□□□□ -0.61
COL6A1-201ENST00000361866 ABHD17AQ96GS6 310 aa11.23□□□□□ -0.61
COL6A1-201ENST00000361866 LOC105371242A0A075B767 164 aa11.23□□□□□ -0.61
COL6A1-201ENST00000361866 IGKV3-20P01619 116 aa11.23□□□□□ -0.61
COL6A1-201ENST00000361866 GTSCR1Q86UQ5 136 aa11.23□□□□□ -0.61
COL6A1-201ENST00000361866 ZNF418Q8TF45 676 aaPredicted RBP11.23□□□□□ -0.61
COL6A1-201ENST00000361866 Q6AWC8 147 aa11.23□□□□□ -0.61
COL6A1-201ENST00000361866 TMEM213A2RRL7 107 aa11.22□□□□□ -0.61
COL6A1-201ENST00000361866 CCL25O15444 150 aa11.22□□□□□ -0.61
COL6A1-201ENST00000361866 PRSS2P07478 247 aa11.22□□□□□ -0.61
COL6A1-201ENST00000361866 IGHV1-8P0DP01 117 aa11.22□□□□□ -0.61
COL6A1-201ENST00000361866 TMPRSS3P57727 454 aa11.22□□□□□ -0.61
COL6A1-201ENST00000361866 Q8TCH9 128 aa11.22□□□□□ -0.61
COL6A1-201ENST00000361866 A0A0G2JLM5 398 aa11.22□□□□□ -0.61
COL6A1-201ENST00000361866 SMIM27A0A1W2PRY6 76 aa11.22□□□□□ -0.61
COL6A1-201ENST00000361866 WISP2O76076 250 aa11.22□□□□□ -0.61
COL6A1-201ENST00000361866 FAM106CPP0CH98 169 aa11.22□□□□□ -0.61
COL6A1-201ENST00000361866 PF4V1P10720 104 aa11.22□□□□□ -0.61
COL6A1-201ENST00000361866 APOBEC3AP31941 199 aaPredicted RBP11.22□□□□□ -0.61
COL6A1-201ENST00000361866 LINC00173Q6ZV60 143 aa11.22□□□□□ -0.61
COL6A1-201ENST00000361866 NDUFA4L2Q9NRX3 87 aa11.22□□□□□ -0.61
COL6A1-201ENST00000361866 MRPL52Q86TS9 123 aaKnown RBP11.22□□□□□ -0.61
COL6A1-201ENST00000361866 SIGMAR1Q99720 223 aa11.22□□□□□ -0.61
COL6A1-201ENST00000361866 DSCAML1Q8TD84 2053 aa11.22□□□□□ -0.61
COL6A1-201ENST00000361866 IGHV1-24A0A0C4DH33 117 aa11.21□□□□□ -0.61
COL6A1-201ENST00000361866 FAM71F2Q6NXP2 309 aa11.21□□□□□ -0.61
COL6A1-201ENST00000361866 CLEC19AQ6UXS0 136 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms