RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 FOXL1Q12952 345 aa11.02□□□□□ -0.65
CSNK1E-201ENST00000359867 TNXAQ16473 311 aa11.02□□□□□ -0.65
CSNK1E-201ENST00000359867 SPATA45Q537H7 98 aa11.02□□□□□ -0.65
CSNK1E-201ENST00000359867 TXN2Q99757 166 aa11.02□□□□□ -0.65
CSNK1E-201ENST00000359867 C19orf24Q9BVV8 132 aa11.02□□□□□ -0.65
CSNK1E-201ENST00000359867 IGLC7A0M8Q6 106 aa11.01□□□□□ -0.65
CSNK1E-201ENST00000359867 SERF1AO75920 110 aa11.01□□□□□ -0.65
CSNK1E-201ENST00000359867 HNRNPA3P51991 378 aaKnown RBP11.01□□□□□ -0.65
CSNK1E-201ENST00000359867 VAMP3Q15836 100 aa11.01□□□□□ -0.65
CSNK1E-201ENST00000359867 MINOS1Q5TGZ0 78 aa11.01□□□□□ -0.65
CSNK1E-201ENST00000359867 OR2D3Q8NGH3 330 aa11.01□□□□□ -0.65
CSNK1E-201ENST00000359867 CFHR4Q92496 578 aa11.01□□□□□ -0.65
CSNK1E-201ENST00000359867 MINOS1-NBL1R4GNA1 71 aa11.01□□□□□ -0.65
CSNK1E-201ENST00000359867 IGHV3OR16-10A0A075B7F0 116 aa11.01□□□□□ -0.65
CSNK1E-201ENST00000359867 HOXB4P17483 251 aaPredicted RBP11.01□□□□□ -0.65
CSNK1E-201ENST00000359867 IER3P46695 156 aa11.01□□□□□ -0.65
CSNK1E-201ENST00000359867 PAX8Q06710 450 aa11.01□□□□□ -0.65
CSNK1E-201ENST00000359867 CCDC144NLQ6NUI1 221 aa11.01□□□□□ -0.65
CSNK1E-201ENST00000359867 TXNDC17Q9BRA2 123 aa11.01□□□□□ -0.65
CSNK1E-201ENST00000359867 SRSF8Q9BRL6 282 aaKnown RBP11.01□□□□□ -0.65
CSNK1E-201ENST00000359867 MRPL18Q9H0U6 180 aaKnown RBP11.01□□□□□ -0.65
CSNK1E-201ENST00000359867 TRAV30A0A087WSZ9 112 aa11□□□□□ -0.65
CSNK1E-201ENST00000359867 GCHFRP30047 84 aa11□□□□□ -0.65
CSNK1E-201ENST00000359867 SLC35B1P78383 322 aa11□□□□□ -0.65
CSNK1E-201ENST00000359867 CFAP161Q6P656 301 aa11□□□□□ -0.65
CSNK1E-201ENST00000359867 FAM103A1Q9BTL3 118 aaKnown RBP11□□□□□ -0.65
CSNK1E-201ENST00000359867 C7orf69Q9H7B7 122 aa11□□□□□ -0.65
CSNK1E-201ENST00000359867 IGKV1OR2-108A0A075B7D4 117 aa11□□□□□ -0.65
CSNK1E-201ENST00000359867 MT-CO2P00403 227 aa11□□□□□ -0.65
CSNK1E-201ENST00000359867 AVPP01185 164 aa11□□□□□ -0.65
CSNK1E-201ENST00000359867 IGLC2P0DOY2 106 aa11□□□□□ -0.65
CSNK1E-201ENST00000359867 IGLC3P0DOY3 106 aa11□□□□□ -0.65
CSNK1E-201ENST00000359867 MLANAQ16655 118 aa11□□□□□ -0.65
CSNK1E-201ENST00000359867 ASPHD1Q5U4P2 390 aa11□□□□□ -0.65
CSNK1E-201ENST00000359867 NPBQ8NG41 125 aa11□□□□□ -0.65
CSNK1E-201ENST00000359867 MEGF9Q9H1U4 602 aa11□□□□□ -0.65
CSNK1E-201ENST00000359867 CORTO00230 105 aa10.99□□□□□ -0.65
CSNK1E-201ENST00000359867 MOSP00540 346 aa10.99□□□□□ -0.65
CSNK1E-201ENST00000359867 CRISP2P16562 243 aa10.99□□□□□ -0.65
CSNK1E-201ENST00000359867 Q8N976 141 aa10.99□□□□□ -0.65
CSNK1E-201ENST00000359867 FBXL15Q9H469 300 aa10.99□□□□□ -0.65
CSNK1E-201ENST00000359867 HILPDAQ9Y5L2 63 aa10.99□□□□□ -0.65
CSNK1E-201ENST00000359867 FCN1O00602 326 aa10.99□□□□□ -0.65
CSNK1E-201ENST00000359867 BTF3L4Q96K17 158 aa10.99□□□□□ -0.65
CSNK1E-201ENST00000359867 FNDC4Q9H6D8 234 aaPredicted RBP10.99□□□□□ -0.65
CSNK1E-201ENST00000359867 UQCR10Q9UDW1 63 aa10.99□□□□□ -0.65
CSNK1E-201ENST00000359867 TNCP24821 2201 aa10.99□□□□□ -0.65
CSNK1E-201ENST00000359867 SAP30O75446 220 aa10.98□□□□□ -0.65
CSNK1E-201ENST00000359867 NDUFA3O95167 84 aa10.98□□□□□ -0.65
CSNK1E-201ENST00000359867 YPEL3P61236 119 aaPredicted RBP10.98□□□□□ -0.65
CSNK1E-201ENST00000359867 KIAA1644Q3SXP7 199 aa10.98□□□□□ -0.65
CSNK1E-201ENST00000359867 BAGE3Q86Y29 109 aa10.98□□□□□ -0.65
CSNK1E-201ENST00000359867 BAGE2Q86Y30 109 aa10.98□□□□□ -0.65
CSNK1E-201ENST00000359867 THAP8Q8NA92 274 aa10.98□□□□□ -0.65
CSNK1E-201ENST00000359867 OR2T6Q8NHC8 308 aa10.98□□□□□ -0.65
CSNK1E-201ENST00000359867 FBXL7Q9UJT9 491 aa10.98□□□□□ -0.65
CSNK1E-201ENST00000359867 TRAV40A0A0B4J280 105 aa10.98□□□□□ -0.65
CSNK1E-201ENST00000359867 CYSRT1A8MQ03 144 aa10.98□□□□□ -0.65
CSNK1E-201ENST00000359867 SNURFLB1AK76 121 aa10.98□□□□□ -0.65
CSNK1E-201ENST00000359867 TEX22C9J3V5 150 aa10.98□□□□□ -0.65
CSNK1E-201ENST00000359867 NBR2O15453 112 aa10.98□□□□□ -0.65
CSNK1E-201ENST00000359867 CRYGCP07315 174 aa10.98□□□□□ -0.65
CSNK1E-201ENST00000359867 TCL1AP56279 114 aa10.98□□□□□ -0.65
CSNK1E-201ENST00000359867 LGALS4P56470 323 aa10.98□□□□□ -0.65
CSNK1E-201ENST00000359867 FXYD3Q14802 87 aa10.98□□□□□ -0.65
CSNK1E-201ENST00000359867 PLGLAQ15195 96 aa10.98□□□□□ -0.65
CSNK1E-201ENST00000359867 MIR17HGQ75NE6 70 aa10.98□□□□□ -0.65
CSNK1E-201ENST00000359867 OR8I2Q8N0Y5 310 aa10.98□□□□□ -0.65
CSNK1E-201ENST00000359867 IL36BQ9NZH7 164 aa10.98□□□□□ -0.65
CSNK1E-201ENST00000359867 TBL2Q9Y4P3 447 aaKnown RBP10.98□□□□□ -0.65
CSNK1E-201ENST00000359867 SONP18583 2426 aaKnown RBP10.98□□□□□ -0.65
CSNK1E-201ENST00000359867 GATA2P23769 480 aaPredicted RBP10.97□□□□□ -0.65
CSNK1E-201ENST00000359867 TPPP2P59282 170 aa10.97□□□□□ -0.65
CSNK1E-201ENST00000359867 SRSF12Q8WXF0 261 aaKnown RBP10.97□□□□□ -0.65
CSNK1E-201ENST00000359867 SMIM12Q96EX1 92 aa10.97□□□□□ -0.65
CSNK1E-201ENST00000359867 CENPVL3A0A0U1RRI6 287 aa10.97□□□□□ -0.65
CSNK1E-201ENST00000359867 IGHV4-38-2P0DP08 117 aa10.97□□□□□ -0.65
CSNK1E-201ENST00000359867 RUSC1-AS1Q66K80 236 aa10.97□□□□□ -0.65
CSNK1E-201ENST00000359867 BRD3OSQ6XYD6 125 aa10.97□□□□□ -0.65
CSNK1E-201ENST00000359867 OR4B1Q8NGF8 309 aa10.97□□□□□ -0.65
CSNK1E-201ENST00000359867 EAF1Q96JC9 268 aaPredicted RBP10.97□□□□□ -0.65
CSNK1E-201ENST00000359867 SAMD10Q9BYL1 202 aa10.97□□□□□ -0.65
CSNK1E-201ENST00000359867 F11RQ9Y624 299 aaKnown RBP10.97□□□□□ -0.65
CSNK1E-201ENST00000359867 REG1AP05451 166 aa10.96□□□□□ -0.65
CSNK1E-201ENST00000359867 AREGP15514 252 aa10.96□□□□□ -0.65
CSNK1E-201ENST00000359867 UBE2E1P51965 193 aa10.96□□□□□ -0.65
CSNK1E-201ENST00000359867 KRTDAPP60985 99 aa10.96□□□□□ -0.65
CSNK1E-201ENST00000359867 SUMO1P63165 101 aaKnown RBP10.96□□□□□ -0.65
CSNK1E-201ENST00000359867 EBI3Q14213 229 aa10.96□□□□□ -0.65
CSNK1E-201ENST00000359867 PRR27Q6MZM9 219 aa10.96□□□□□ -0.65
CSNK1E-201ENST00000359867 NPIPB3Q92617 1050 aa10.96□□□□□ -0.65
CSNK1E-201ENST00000359867 RNASE7Q9H1E1 156 aaKnown RBP10.96□□□□□ -0.65
CSNK1E-201ENST00000359867 TECRQ9NZ01 308 aaKnown RBP10.96□□□□□ -0.65
CSNK1E-201ENST00000359867 ARL2-SNX15V9GYD0 113 aa10.96□□□□□ -0.65
CSNK1E-201ENST00000359867 TCRBV4S1A1TA0A5B7 111 aa10.96□□□□□ -0.66
CSNK1E-201ENST00000359867 CRYBB3P26998 211 aa10.96□□□□□ -0.66
CSNK1E-201ENST00000359867 SSBP2P81877 361 aaPredicted RBP10.96□□□□□ -0.66
CSNK1E-201ENST00000359867 OR5AU1Q8NGC0 362 aa10.96□□□□□ -0.66
CSNK1E-201ENST00000359867 MRPL32Q9BYC8 188 aaKnown RBP10.96□□□□□ -0.66
CSNK1E-201ENST00000359867 DIRC3C9JPN6 131 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms