RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 TIMM23BQ5SRD1 257 aa11.98□□□□□ -0.49
UBAP1-202ENST00000359544 LINC00305Q7Z4B0 112 aa11.98□□□□□ -0.49
UBAP1-202ENST00000359544 BLNKQ8WV28 456 aa11.98□□□□□ -0.49
UBAP1-202ENST00000359544 THYN1Q9P016 225 aa11.98□□□□□ -0.49
UBAP1-202ENST00000359544 COL8A1P27658 744 aa11.98□□□□□ -0.49
UBAP1-202ENST00000359544 RIGQ13278 110 aa11.98□□□□□ -0.49
UBAP1-202ENST00000359544 IGFL2Q6UWQ7 119 aa11.98□□□□□ -0.49
UBAP1-202ENST00000359544 PPIAL4CA0A0B4J2A2 164 aa11.97□□□□□ -0.49
UBAP1-202ENST00000359544 A0A1B0GW15 77 aa11.97□□□□□ -0.49
UBAP1-202ENST00000359544 SRRM5B3KS81 715 aa11.97□□□□□ -0.49
UBAP1-202ENST00000359544 IGFL3Q6UXB1 125 aa11.97□□□□□ -0.49
UBAP1-202ENST00000359544 Q6ZS92 163 aa11.97□□□□□ -0.49
UBAP1-202ENST00000359544 SLC25A48Q6ZT89 311 aaKnown RBP11.97□□□□□ -0.49
UBAP1-202ENST00000359544 GATD1Q8NB37 220 aa11.97□□□□□ -0.49
UBAP1-202ENST00000359544 SELENOKQ9Y6D0 94 aa11.97□□□□□ -0.49
UBAP1-202ENST00000359544 INS-IGF2F8WCM5 200 aa11.97□□□□□ -0.49
UBAP1-202ENST00000359544 HOXC12P31275 282 aa11.97□□□□□ -0.49
UBAP1-202ENST00000359544 SAMD5Q5TGI4 173 aa11.97□□□□□ -0.49
UBAP1-202ENST00000359544 THAP8Q8NA92 274 aa11.97□□□□□ -0.49
UBAP1-202ENST00000359544 A0A1B0GUT8 65 aa11.96□□□□□ -0.49
UBAP1-202ENST00000359544 J3QR89 54 aa11.96□□□□□ -0.49
UBAP1-202ENST00000359544 SMIM13P0DJ93 91 aa11.96□□□□□ -0.49
UBAP1-202ENST00000359544 CGB3P0DN86 165 aa11.96□□□□□ -0.49
UBAP1-202ENST00000359544 CGB7P0DN87 165 aa11.96□□□□□ -0.49
UBAP1-202ENST00000359544 SSBP2P81877 361 aaPredicted RBP11.96□□□□□ -0.49
UBAP1-202ENST00000359544 C17orf58Q2M2W7 97 aa11.96□□□□□ -0.49
UBAP1-202ENST00000359544 OR10W1Q8NGF6 305 aa11.96□□□□□ -0.49
UBAP1-202ENST00000359544 OR8A1Q8NGG7 326 aa11.96□□□□□ -0.49
UBAP1-202ENST00000359544 NDUFA4L2Q9NRX3 87 aa11.96□□□□□ -0.49
UBAP1-202ENST00000359544 TEX48A0A1B0GUV7 120 aa11.96□□□□□ -0.5
UBAP1-202ENST00000359544 TCRAP04437 139 aa11.96□□□□□ -0.5
UBAP1-202ENST00000359544 SAA1P0DJI8 122 aaPredicted RBP11.96□□□□□ -0.5
UBAP1-202ENST00000359544 PLA2G2AP14555 144 aa11.96□□□□□ -0.5
UBAP1-202ENST00000359544 NPIPB3Q92617 1050 aa11.96□□□□□ -0.5
UBAP1-202ENST00000359544 ATP6V0BQ99437 205 aa11.96□□□□□ -0.5
UBAP1-202ENST00000359544 SVILO95425 2214 aa11.96□□□□□ -0.5
UBAP1-202ENST00000359544 KBTBD11-OT1A0A1B0GTJ5 212 aa11.95□□□□□ -0.5
UBAP1-202ENST00000359544 IGHV1-2P23083 117 aa11.95□□□□□ -0.5
UBAP1-202ENST00000359544 SUB1P53999 127 aaKnown RBP eCLIP11.95□□□□□ -0.5
UBAP1-202ENST00000359544 GTSF1LQ9H1H1 148 aa11.95□□□□□ -0.5
UBAP1-202ENST00000359544 GOSR1O95249 250 aa11.95□□□□□ -0.5
UBAP1-202ENST00000359544 MEF2CQ06413 473 aaPredicted RBP11.95□□□□□ -0.5
UBAP1-202ENST00000359544 UTF1Q5T230 341 aa11.95□□□□□ -0.5
UBAP1-202ENST00000359544 ZNRF1Q8ND25 227 aa11.95□□□□□ -0.5
UBAP1-202ENST00000359544 IGKV1D-37A0A075B6S9 117 aa11.94□□□□□ -0.5
UBAP1-202ENST00000359544 PLAUP00749 431 aa11.94□□□□□ -0.5
UBAP1-202ENST00000359544 IGKV1-16P04430 117 aa11.94□□□□□ -0.5
UBAP1-202ENST00000359544 CD300EQ496F6 205 aaPredicted RBP11.94□□□□□ -0.5
UBAP1-202ENST00000359544 Q86TA4 180 aa11.94□□□□□ -0.5
UBAP1-202ENST00000359544 UTP20O75691 2785 aaKnown RBP11.94□□□□□ -0.5
UBAP1-202ENST00000359544 PPIAL4EA0A075B759 164 aa11.94□□□□□ -0.5
UBAP1-202ENST00000359544 LYZL6O75951 148 aa11.94□□□□□ -0.5
UBAP1-202ENST00000359544 PPIAL4FP0DN26 164 aa11.94□□□□□ -0.5
UBAP1-202ENST00000359544 SMAGPQ0VAQ4 97 aa11.94□□□□□ -0.5
UBAP1-202ENST00000359544 C16orf54Q6UWD8 224 aa11.94□□□□□ -0.5
UBAP1-202ENST00000359544 PLSCR4Q9NRQ2 329 aa11.94□□□□□ -0.5
UBAP1-202ENST00000359544 FZR1Q9UM11 496 aa11.94□□□□□ -0.5
UBAP1-202ENST00000359544 CT45A6P0DMU7 189 aa11.93□□□□□ -0.5
UBAP1-202ENST00000359544 CT45A5P0DMU8 189 aa11.93□□□□□ -0.5
UBAP1-202ENST00000359544 CT45A7P0DMV0 189 aa11.93□□□□□ -0.5
UBAP1-202ENST00000359544 CD46P15529 392 aa11.93□□□□□ -0.5
UBAP1-202ENST00000359544 PSMG4Q5JS54 123 aa11.93□□□□□ -0.5
UBAP1-202ENST00000359544 MDS2Q8NDY4 140 aa11.93□□□□□ -0.5
UBAP1-202ENST00000359544 OSR1Q8TAX0 266 aaPredicted RBP11.93□□□□□ -0.5
UBAP1-202ENST00000359544 Q9H3A6 140 aa11.93□□□□□ -0.5
UBAP1-202ENST00000359544 INSIG2Q9Y5U4 225 aa11.93□□□□□ -0.5
UBAP1-202ENST00000359544 UBR5O95071 2799 aaPredicted RBP11.93□□□□□ -0.5
UBAP1-202ENST00000359544 IGHV3OR15-7A0A075B7D8 119 aa11.93□□□□□ -0.5
UBAP1-202ENST00000359544 CT45A10P0DMU9 189 aa11.93□□□□□ -0.5
UBAP1-202ENST00000359544 CACNG7P62955 275 aa11.93□□□□□ -0.5
UBAP1-202ENST00000359544 ZCCHC24Q8N2G6 241 aaKnown RBP11.93□□□□□ -0.5
UBAP1-202ENST00000359544 PIP4P2Q8N4L2 257 aa11.93□□□□□ -0.5
UBAP1-202ENST00000359544 TMEM116Q8NCL8 245 aa11.93□□□□□ -0.5
UBAP1-202ENST00000359544 CLUHP3Q96NS8 147 aa11.93□□□□□ -0.5
UBAP1-202ENST00000359544 SH3BGRL2Q9UJC5 107 aa11.93□□□□□ -0.5
UBAP1-202ENST00000359544 ZNF207O43670 478 aaKnown RBP11.92□□□□□ -0.5
UBAP1-202ENST00000359544 IGKV3-15P01624 115 aa11.92□□□□□ -0.5
UBAP1-202ENST00000359544 ORM2P19652 201 aa11.92□□□□□ -0.5
UBAP1-202ENST00000359544 CFHR2P36980 270 aa11.92□□□□□ -0.5
UBAP1-202ENST00000359544 TMEM30BQ3MIR4 351 aa11.92□□□□□ -0.5
UBAP1-202ENST00000359544 TRAV17A0A0B4J275 112 aa11.92□□□□□ -0.5
UBAP1-202ENST00000359544 GAGE12HA6NDE8 117 aa11.92□□□□□ -0.5
UBAP1-202ENST00000359544 MBNL2Q5VZF2 373 aaKnown RBP11.92□□□□□ -0.5
UBAP1-202ENST00000359544 Q6AWC8 147 aa11.92□□□□□ -0.5
UBAP1-202ENST00000359544 ZNF414Q96IQ9 312 aa11.92□□□□□ -0.5
UBAP1-202ENST00000359544 A0A096LNJ9 63 aa11.91□□□□□ -0.5
UBAP1-202ENST00000359544 ARMS2P0C7Q2 107 aa11.91□□□□□ -0.5
UBAP1-202ENST00000359544 GNLYP22749 145 aa11.91□□□□□ -0.5
UBAP1-202ENST00000359544 IFI27P40305 119 aaPredicted RBP11.91□□□□□ -0.5
UBAP1-202ENST00000359544 NMUP48645 174 aa11.91□□□□□ -0.5
UBAP1-202ENST00000359544 HARBI1Q96MB7 349 aa11.91□□□□□ -0.5
UBAP1-202ENST00000359544 VGLL1Q99990 258 aa11.91□□□□□ -0.5
UBAP1-202ENST00000359544 SIGLEC8Q9NYZ4 499 aa11.91□□□□□ -0.5
UBAP1-202ENST00000359544 GP9P14770 177 aa11.91□□□□□ -0.5
UBAP1-202ENST00000359544 MEOX1P50221 254 aa11.91□□□□□ -0.5
UBAP1-202ENST00000359544 FOXI2Q6ZQN5 318 aa11.91□□□□□ -0.5
UBAP1-202ENST00000359544 CIARTQ8N365 385 aaPredicted RBP11.91□□□□□ -0.5
UBAP1-202ENST00000359544 DOCK7Q96N67 2140 aa11.91□□□□□ -0.5
UBAP1-202ENST00000359544 OTORQ9NRC9 128 aa11.91□□□□□ -0.5
UBAP1-202ENST00000359544 TSSC4Q9Y5U2 329 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms