RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 CEACAM8P31997 349 aaPredicted RBP7.27□□□□□ -1.25
COL6A6-201ENST00000358511 C18orf32Q8TCD1 76 aa7.27□□□□□ -1.25
COL6A6-201ENST00000358511 PTPRQQ9UMZ3 2332 aa7.27□□□□□ -1.25
COL6A6-201ENST00000358511 CCL21O00585 134 aa7.27□□□□□ -1.25
COL6A6-201ENST00000358511 PSG8Q9UQ74 426 aa7.27□□□□□ -1.25
COL6A6-201ENST00000358511 RNF115Q9Y4L5 304 aa7.27□□□□□ -1.25
COL6A6-201ENST00000358511 HIST1H4AP62805 103 aaKnown RBP7.27□□□□□ -1.25
COL6A6-201ENST00000358511 C1orf53Q5VUE5 145 aa7.27□□□□□ -1.25
COL6A6-201ENST00000358511 DEFB124Q8NES8 71 aa7.27□□□□□ -1.25
COL6A6-201ENST00000358511 RFNGQ9Y644 331 aa7.27□□□□□ -1.25
COL6A6-201ENST00000358511 TRGV2A0A075B6R0 118 aa7.27□□□□□ -1.25
COL6A6-201ENST00000358511 CCL19Q99731 98 aa7.27□□□□□ -1.25
COL6A6-201ENST00000358511 H3BMM0 161 aa7.27□□□□□ -1.25
COL6A6-201ENST00000358511 ANXA2RQ3ZCQ2 193 aa7.27□□□□□ -1.25
COL6A6-201ENST00000358511 UBE2WQ96B02 151 aa7.27□□□□□ -1.25
COL6A6-201ENST00000358511 C5orf67F2Z3F1 127 aa7.26□□□□□ -1.25
COL6A6-201ENST00000358511 INS-IGF2F8WCM5 200 aa7.26□□□□□ -1.25
COL6A6-201ENST00000358511 INSP01308 110 aa7.26□□□□□ -1.25
COL6A6-201ENST00000358511 SELLP14151 372 aa7.26□□□□□ -1.25
COL6A6-201ENST00000358511 MESP2Q0VG99 397 aa7.26□□□□□ -1.25
COL6A6-201ENST00000358511 SPSB3Q6PJ21 355 aa7.26□□□□□ -1.25
COL6A6-201ENST00000358511 COX8AP10176 69 aa7.26□□□□□ -1.25
COL6A6-201ENST00000358511 MORN3Q6PF18 240 aaPredicted RBP7.26□□□□□ -1.25
COL6A6-201ENST00000358511 STPG4Q8N801 248 aa7.26□□□□□ -1.25
COL6A6-201ENST00000358511 IQCF6A8MYZ5 107 aa7.26□□□□□ -1.25
COL6A6-201ENST00000358511 LILRA1O75019 489 aa7.26□□□□□ -1.25
COL6A6-201ENST00000358511 PFN1P07737 140 aaKnown RBP7.26□□□□□ -1.25
COL6A6-201ENST00000358511 IGHV2OR16-5A0A0B4J2B6 119 aa7.26□□□□□ -1.25
COL6A6-201ENST00000358511 BVES-AS1Q5T3Y7 98 aa7.26□□□□□ -1.25
COL6A6-201ENST00000358511 RSPO4Q2I0M5 234 aaPredicted RBP7.26□□□□□ -1.25
COL6A6-201ENST00000358511 CT83Q5H943 113 aa7.26□□□□□ -1.25
COL6A6-201ENST00000358511 FOXH1O75593 365 aa7.25□□□□□ -1.25
COL6A6-201ENST00000358511 Q6ZS49 121 aa7.25□□□□□ -1.25
COL6A6-201ENST00000358511 IGHV2-70DA0A0C4DH43 119 aa7.25□□□□□ -1.25
COL6A6-201ENST00000358511 WBP1Q96G27 269 aa7.25□□□□□ -1.25
COL6A6-201ENST00000358511 C9JAW5 83 aa7.25□□□□□ -1.25
COL6A6-201ENST00000358511 FNDC10F2Z333 226 aa7.25□□□□□ -1.25
COL6A6-201ENST00000358511 IGKV1-5P01602 117 aa7.25□□□□□ -1.25
COL6A6-201ENST00000358511 GLRXP35754 106 aa7.25□□□□□ -1.25
COL6A6-201ENST00000358511 CD28P10747 220 aa7.25□□□□□ -1.25
COL6A6-201ENST00000358511 ZC2HC1BQ5TFG8 222 aa7.25□□□□□ -1.25
COL6A6-201ENST00000358511 NCR2O95944 276 aa7.25□□□□□ -1.25
COL6A6-201ENST00000358511 HGFACQ04756 655 aa7.25□□□□□ -1.25
COL6A6-201ENST00000358511 PCOLCEQ15113 449 aa7.25□□□□□ -1.25
COL6A6-201ENST00000358511 PLEKHB2Q96CS7 222 aa7.25□□□□□ -1.25
COL6A6-201ENST00000358511 TGFBR3LH3BV60 316 aa7.24□□□□□ -1.25
COL6A6-201ENST00000358511 ETDBQ3ZM63 59 aa7.24□□□□□ -1.25
COL6A6-201ENST00000358511 BMPERQ8N8U9 685 aa7.24□□□□□ -1.25
COL6A6-201ENST00000358511 PPP1R27Q86WC6 154 aa7.24□□□□□ -1.25
COL6A6-201ENST00000358511 TRGV9Q99603 122 aa7.24□□□□□ -1.25
COL6A6-201ENST00000358511 IGHV3-35A0A0C4DH35 117 aa7.24□□□□□ -1.25
COL6A6-201ENST00000358511 GFRA3O60609 400 aa7.24□□□□□ -1.25
COL6A6-201ENST00000358511 DUX3Q96PT4 197 aa7.24□□□□□ -1.25
COL6A6-201ENST00000358511 SPATA31B1PQ5VZV4 182 aa7.24□□□□□ -1.25
COL6A6-201ENST00000358511 ATP5J2P56134 94 aa7.24□□□□□ -1.25
COL6A6-201ENST00000358511 FBXL15Q9H469 300 aa7.24□□□□□ -1.25
COL6A6-201ENST00000358511 IGHV1-24A0A0C4DH33 117 aa7.24□□□□□ -1.25
COL6A6-201ENST00000358511 CCL25O15444 150 aa7.24□□□□□ -1.25
COL6A6-201ENST00000358511 TOMM40O96008 361 aa7.24□□□□□ -1.25
COL6A6-201ENST00000358511 INAFM2P0DMQ5 153 aa7.24□□□□□ -1.25
COL6A6-201ENST00000358511 C1orf122Q6ZSJ8 110 aa7.24□□□□□ -1.25
COL6A6-201ENST00000358511 IGHV3OR16-13A0A075B7E8 117 aa7.23□□□□□ -1.25
COL6A6-201ENST00000358511 IGHV3-74A0A0B4J1X5 117 aa7.23□□□□□ -1.25
COL6A6-201ENST00000358511 TCRAP04437 139 aa7.23□□□□□ -1.25
COL6A6-201ENST00000358511 CD7P09564 240 aa7.23□□□□□ -1.25
COL6A6-201ENST00000358511 SLAQ13239 276 aa7.23□□□□□ -1.25
COL6A6-201ENST00000358511 DTX2Q86UW9 622 aa7.23□□□□□ -1.25
COL6A6-201ENST00000358511 IGLV3-32A0A0A0MS00 114 aa7.23□□□□□ -1.25
COL6A6-201ENST00000358511 TRBV6-6A0A0A6YYG2 114 aa7.23□□□□□ -1.25
COL6A6-201ENST00000358511 TRIP6Q15654 476 aaKnown RBP7.23□□□□□ -1.25
COL6A6-201ENST00000358511 RTN4RL2Q86UN3 420 aa7.23□□□□□ -1.25
COL6A6-201ENST00000358511 IGKV1-27A0A075B6S5 117 aa7.23□□□□□ -1.25
COL6A6-201ENST00000358511 EXOC3-AS1Q8N2X6 119 aa7.23□□□□□ -1.25
COL6A6-201ENST00000358511 COL4A5P29400 1685 aa7.23□□□□□ -1.25
COL6A6-201ENST00000358511 TMEM86BQ8N661 226 aa7.23□□□□□ -1.25
COL6A6-201ENST00000358511 ZNF837Q96EG3 531 aaPredicted RBP7.23□□□□□ -1.25
COL6A6-201ENST00000358511 IGHV3-66A0A0C4DH42 116 aa7.23□□□□□ -1.25
COL6A6-201ENST00000358511 NPIPB5A8MRT5 1133 aa7.23□□□□□ -1.25
COL6A6-201ENST00000358511 IGKV1D-33P01593 117 aa7.23□□□□□ -1.25
COL6A6-201ENST00000358511 IGKV1-33P01594 117 aa7.23□□□□□ -1.25
COL6A6-201ENST00000358511 LYZL1Q6UWQ5 148 aa7.23□□□□□ -1.25
COL6A6-201ENST00000358511 C1orf210Q8IVY1 113 aa7.23□□□□□ -1.25
COL6A6-201ENST00000358511 PSG7Q13046 419 aa7.23□□□□□ -1.25
COL6A6-201ENST00000358511 TMEM42Q69YG0 159 aa7.23□□□□□ -1.25
COL6A6-201ENST00000358511 ANKHD1Q8IWZ3 2542 aaKnown RBP7.23□□□□□ -1.25
COL6A6-201ENST00000358511 IGHV3-64A0A075B6Q5 118 aa7.23□□□□□ -1.25
COL6A6-201ENST00000358511 LYPD6BQ8NI32 183 aa7.23□□□□□ -1.25
COL6A6-201ENST00000358511 SMIM27A0A1W2PRY6 76 aa7.22□□□□□ -1.25
COL6A6-201ENST00000358511 CECR9P0C854 216 aa7.22□□□□□ -1.25
COL6A6-201ENST00000358511 IGLL1P15814 213 aa7.22□□□□□ -1.25
COL6A6-201ENST00000358511 ZNF138P52744 262 aa7.22□□□□□ -1.25
COL6A6-201ENST00000358511 TMEM158Q8WZ71 300 aa7.22□□□□□ -1.25
COL6A6-201ENST00000358511 LAMTOR3Q9UHA4 124 aa7.22□□□□□ -1.25
COL6A6-201ENST00000358511 IGHV3-49A0A0A0MS15 119 aa7.22□□□□□ -1.25
COL6A6-201ENST00000358511 VWC2LB2RUY7 222 aa7.22□□□□□ -1.25
COL6A6-201ENST00000358511 JPT2Q9H910 190 aa7.22□□□□□ -1.25
COL6A6-201ENST00000358511 PRRC2AP48634 2157 aaKnown RBP7.22□□□□□ -1.25
COL6A6-201ENST00000358511 YPEL3P61236 119 aaPredicted RBP7.22□□□□□ -1.25
COL6A6-201ENST00000358511 CDPF1Q6NVV7 123 aa7.22□□□□□ -1.25
COL6A6-201ENST00000358511 ZNF784Q8NCA9 323 aaPredicted RBP7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms