RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 HELTA6NFD8 242 aa11.49□□□□□ -0.57
TPM1-206ENST00000358278 MBP02144 154 aa11.49□□□□□ -0.57
TPM1-206ENST00000358278 SPP1P10451 314 aa11.49□□□□□ -0.57
TPM1-206ENST00000358278 RAB2AP61019 212 aa11.49□□□□□ -0.57
TPM1-206ENST00000358278 SAMD5Q5TGI4 173 aa11.49□□□□□ -0.57
TPM1-206ENST00000358278 MRPL32Q9BYC8 188 aaKnown RBP11.49□□□□□ -0.57
TPM1-206ENST00000358278 GALR1P47211 349 aa11.49□□□□□ -0.57
TPM1-206ENST00000358278 RHOBP62745 196 aa11.49□□□□□ -0.57
TPM1-206ENST00000358278 GUCA2BQ16661 112 aa11.49□□□□□ -0.57
TPM1-206ENST00000358278 AKR1C8PQ5T2L2 129 aa11.49□□□□□ -0.57
TPM1-206ENST00000358278 MORN5Q5VZ52 161 aa11.49□□□□□ -0.57
TPM1-206ENST00000358278 OR10G4Q8NGN3 311 aa11.49□□□□□ -0.57
TPM1-206ENST00000358278 OR10G9Q8NGN4 311 aa11.49□□□□□ -0.57
TPM1-206ENST00000358278 OR10G7Q8NGN6 311 aa11.49□□□□□ -0.57
TPM1-206ENST00000358278 GPR82Q96P67 336 aa11.49□□□□□ -0.57
TPM1-206ENST00000358278 SEPSECSQ9HD40 501 aaKnown RBP11.49□□□□□ -0.57
TPM1-206ENST00000358278 TRAV25A0A0B4J276 109 aa11.48□□□□□ -0.57
TPM1-206ENST00000358278 A0A1W2PPV4 95 aa11.48□□□□□ -0.57
TPM1-206ENST00000358278 RPL7P18124 248 aaKnown RBP11.48□□□□□ -0.57
TPM1-206ENST00000358278 TMEM41BQ5BJD5 291 aa11.48□□□□□ -0.57
TPM1-206ENST00000358278 FAM122CQ6P4D5 195 aa11.48□□□□□ -0.57
TPM1-206ENST00000358278 STXBP6Q8NFX7 210 aa11.48□□□□□ -0.57
TPM1-206ENST00000358278 ZMAT5Q9UDW3 170 aaKnown RBP11.48□□□□□ -0.57
TPM1-206ENST00000358278 FUT9Q9Y231 359 aa11.48□□□□□ -0.57
TPM1-206ENST00000358278 TSPAN4O14817 238 aa11.47□□□□□ -0.57
TPM1-206ENST00000358278 SEC11BP0C7V7 166 aa11.47□□□□□ -0.57
TPM1-206ENST00000358278 PAFAH1B2P68402 229 aa11.47□□□□□ -0.57
TPM1-206ENST00000358278 SPATA31B1PQ5VZV4 182 aa11.47□□□□□ -0.57
TPM1-206ENST00000358278 FAM90A2PQ658T7 463 aa11.47□□□□□ -0.57
TPM1-206ENST00000358278 EIF5AL1Q6IS14 154 aaKnown RBP11.47□□□□□ -0.57
TPM1-206ENST00000358278 MIR17HGQ75NE6 70 aa11.47□□□□□ -0.57
TPM1-206ENST00000358278 BPIFA4PQ86YQ2 179 aa11.47□□□□□ -0.57
TPM1-206ENST00000358278 GBGT1Q8N5D6 347 aa11.47□□□□□ -0.57
TPM1-206ENST00000358278 TMED6Q8WW62 240 aa11.47□□□□□ -0.57
TPM1-206ENST00000358278 TRAV5A0A0B4J249 113 aa11.46□□□□□ -0.57
TPM1-206ENST00000358278 DNASE2O00115 360 aaPredicted RBP11.46□□□□□ -0.57
TPM1-206ENST00000358278 ATF4P18848 351 aaPredicted RBP11.46□□□□□ -0.57
TPM1-206ENST00000358278 TFPI2P48307 235 aa11.46□□□□□ -0.57
TPM1-206ENST00000358278 CDC34P49427 236 aaPredicted RBP11.46□□□□□ -0.57
TPM1-206ENST00000358278 SPAG8Q99932 426 aaPredicted RBP11.46□□□□□ -0.57
TPM1-206ENST00000358278 ZNF785A8K8V0 405 aa11.46□□□□□ -0.58
TPM1-206ENST00000358278 TAS2R45P59539 299 aa11.46□□□□□ -0.58
TPM1-206ENST00000358278 EGFEM1PQ0D2K5 195 aa11.46□□□□□ -0.58
TPM1-206ENST00000358278 MS4A6AQ9H2W1 248 aa11.46□□□□□ -0.58
TPM1-206ENST00000358278 NRN1Q9NPD7 142 aa11.46□□□□□ -0.58
TPM1-206ENST00000358278 RPRMQ9NS64 109 aa11.46□□□□□ -0.58
TPM1-206ENST00000358278 ZNF256Q9Y2P7 627 aaPredicted RBP11.46□□□□□ -0.58
TPM1-206ENST00000358278 OR4C46A6NHA9 309 aa11.45□□□□□ -0.58
TPM1-206ENST00000358278 OR7C2O60412 319 aa11.45□□□□□ -0.58
TPM1-206ENST00000358278 GP9P14770 177 aa11.45□□□□□ -0.58
TPM1-206ENST00000358278 KHDC3LQ587J8 217 aa11.45□□□□□ -0.58
TPM1-206ENST00000358278 WFDC3Q8IUB2 231 aa11.45□□□□□ -0.58
TPM1-206ENST00000358278 RPP25LQ8N5L8 163 aaKnown RBP11.45□□□□□ -0.58
TPM1-206ENST00000358278 SLC25A2Q9BXI2 301 aa11.45□□□□□ -0.58
TPM1-206ENST00000358278 UMAD1C9J7I0 102 aa11.44□□□□□ -0.58
TPM1-206ENST00000358278 ACTR3CQ9C0K3 210 aaPredicted RBP11.44□□□□□ -0.58
TPM1-206ENST00000358278 HMGB3O15347 200 aaKnown RBP11.43□□□□□ -0.58
TPM1-206ENST00000358278 EIF3GO75821 320 aaKnown RBP eCLIP11.43□□□□□ -0.58
TPM1-206ENST00000358278 GTSCR1Q86UQ5 136 aa11.43□□□□□ -0.58
TPM1-206ENST00000358278 PYYP10082 97 aa11.43□□□□□ -0.58
TPM1-206ENST00000358278 MEOX2P50222 304 aa11.43□□□□□ -0.58
TPM1-206ENST00000358278 KRTAP10-11P60412 298 aa11.43□□□□□ -0.58
TPM1-206ENST00000358278 BEAN1Q3B7T3 259 aa11.43□□□□□ -0.58
TPM1-206ENST00000358278 RAB24Q969Q5 203 aa11.43□□□□□ -0.58
TPM1-206ENST00000358278 FAM167A-AS1Q96KT0 104 aa11.43□□□□□ -0.58
TPM1-206ENST00000358278 TMEM14CQ9P0S9 112 aa11.43□□□□□ -0.58
TPM1-206ENST00000358278 SMAD5-AS1Q9Y6J3 95 aa11.43□□□□□ -0.58
TPM1-206ENST00000358278 DNAH3Q8TD57 4116 aa11.43□□□□□ -0.58
TPM1-206ENST00000358278 CTXND1A0A1B0GTU2 59 aa11.42□□□□□ -0.58
TPM1-206ENST00000358278 MRPS12O15235 138 aaKnown RBP11.42□□□□□ -0.58
TPM1-206ENST00000358278 SNRPCP09234 159 aaKnown RBP11.42□□□□□ -0.58
TPM1-206ENST00000358278 PQLC2Q6ZP29 291 aa11.42□□□□□ -0.58
TPM1-206ENST00000358278 FAM213BQ8TBF2 198 aa11.42□□□□□ -0.58
TPM1-206ENST00000358278 DCANP1Q8TF63 244 aa11.42□□□□□ -0.58
TPM1-206ENST00000358278 PHYHIPLQ96FC7 376 aa11.42□□□□□ -0.58
TPM1-206ENST00000358278 PRR25Q96S07 402 aa11.42□□□□□ -0.58
TPM1-206ENST00000358278 PAXXQ9BUH6 204 aa11.42□□□□□ -0.58
TPM1-206ENST00000358278 OR51M1Q9H341 326 aa11.42□□□□□ -0.58
TPM1-206ENST00000358278 A0A087X0K7 114 aa11.41□□□□□ -0.58
TPM1-206ENST00000358278 TRAV2A0A0B4J234 112 aa11.41□□□□□ -0.58
TPM1-206ENST00000358278 OR10J4P0C629 311 aa11.41□□□□□ -0.58
TPM1-206ENST00000358278 IGLC2P0DOY2 106 aa11.41□□□□□ -0.58
TPM1-206ENST00000358278 CD81P60033 236 aa11.41□□□□□ -0.58
TPM1-206ENST00000358278 UBE2L3P68036 154 aaKnown RBP11.41□□□□□ -0.58
TPM1-206ENST00000358278 ALKAL2Q6UX46 152 aa11.41□□□□□ -0.58
TPM1-206ENST00000358278 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.41□□□□□ -0.58
TPM1-206ENST00000358278 LRRC20Q8TCA0 184 aa11.41□□□□□ -0.58
TPM1-206ENST00000358278 HRH4Q9H3N8 390 aa11.41□□□□□ -0.58
TPM1-206ENST00000358278 K7EQG2 157 aa11.4□□□□□ -0.58
TPM1-206ENST00000358278 STAG3L2P0CL84 134 aa11.4□□□□□ -0.58
TPM1-206ENST00000358278 STAG3L3P0CL85 134 aa11.4□□□□□ -0.58
TPM1-206ENST00000358278 ARL14EPLP0DKL9 152 aa11.4□□□□□ -0.58
TPM1-206ENST00000358278 FHITP49789 147 aa11.4□□□□□ -0.58
TPM1-206ENST00000358278 RAB5CP51148 216 aa11.4□□□□□ -0.58
TPM1-206ENST00000358278 ZNF726P1Q15940 193 aa11.4□□□□□ -0.58
TPM1-206ENST00000358278 KPRPQ5T749 579 aaPredicted RBP11.4□□□□□ -0.58
TPM1-206ENST00000358278 SAMD13Q5VXD3 122 aa11.4□□□□□ -0.58
TPM1-206ENST00000358278 LCN15Q6UWW0 184 aa11.4□□□□□ -0.58
TPM1-206ENST00000358278 DPPA3Q6W0C5 159 aa11.4□□□□□ -0.58
TPM1-206ENST00000358278 SSX7Q7RTT5 188 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms