RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 C9orf66Q5T8R8 295 aa19.13■□□□□ 0.65
SSBP3-202ENST00000357475 FAM90A2PQ658T7 463 aa19.13■□□□□ 0.65
SSBP3-202ENST00000357475 TCF24Q7RTU0 167 aa19.13■□□□□ 0.65
SSBP3-202ENST00000357475 OR8I2Q8N0Y5 310 aa19.13■□□□□ 0.65
SSBP3-202ENST00000357475 FAM167A-AS1Q96KT0 104 aa19.13■□□□□ 0.65
SSBP3-202ENST00000357475 SMAD5-AS1Q9Y6J3 95 aa19.13■□□□□ 0.65
SSBP3-202ENST00000357475 MBP02144 154 aa19.12■□□□□ 0.65
SSBP3-202ENST00000357475 RHOBP62745 196 aa19.12■□□□□ 0.65
SSBP3-202ENST00000357475 TMEM61Q8N0U2 210 aa19.12■□□□□ 0.65
SSBP3-202ENST00000357475 C17orf77Q96MU5 243 aa19.12■□□□□ 0.65
SSBP3-202ENST00000357475 MRPS12O15235 138 aaKnown RBP19.11■□□□□ 0.65
SSBP3-202ENST00000357475 CDC34P49427 236 aaPredicted RBP19.11■□□□□ 0.65
SSBP3-202ENST00000357475 GRAMD2BQ96HH9 432 aa19.11■□□□□ 0.65
SSBP3-202ENST00000357475 MCRIP2Q9BUT9 160 aaKnown RBP19.11■□□□□ 0.65
SSBP3-202ENST00000357475 MRPL32Q9BYC8 188 aaKnown RBP19.11■□□□□ 0.65
SSBP3-202ENST00000357475 TECRQ9NZ01 308 aaKnown RBP19.11■□□□□ 0.65
SSBP3-202ENST00000357475 C1orf194Q5T5A4 169 aa19.1■□□□□ 0.65
SSBP3-202ENST00000357475 SIGLEC15Q6ZMC9 328 aa19.1■□□□□ 0.65
SSBP3-202ENST00000357475 RAB24Q969Q5 203 aa19.1■□□□□ 0.65
SSBP3-202ENST00000357475 ZNF503Q96F45 646 aa19.1■□□□□ 0.65
SSBP3-202ENST00000357475 TMEM231Q9H6L2 316 aa19.1■□□□□ 0.65
SSBP3-202ENST00000357475 PFDN2Q9UHV9 154 aa19.1■□□□□ 0.65
SSBP3-202ENST00000357475 A0A1W2PPV4 95 aa19.1■□□□□ 0.65
SSBP3-202ENST00000357475 PYYP10082 97 aa19.1■□□□□ 0.65
SSBP3-202ENST00000357475 RPL11P62913 178 aaKnown RBP19.09■□□□□ 0.65
SSBP3-202ENST00000357475 EIF5AL1Q6IS14 154 aaKnown RBP19.09■□□□□ 0.65
SSBP3-202ENST00000357475 GBGT1Q8N5D6 347 aa19.09■□□□□ 0.65
SSBP3-202ENST00000357475 FAM213BQ8TBF2 198 aa19.09■□□□□ 0.65
SSBP3-202ENST00000357475 UMAD1C9J7I0 102 aa19.08■□□□□ 0.64
SSBP3-202ENST00000357475 GP9P14770 177 aa19.08■□□□□ 0.64
SSBP3-202ENST00000357475 BMI1P35226 326 aa19.08■□□□□ 0.64
SSBP3-202ENST00000357475 SULT1A2P50226 295 aa19.08■□□□□ 0.64
SSBP3-202ENST00000357475 PHYHIPLQ96FC7 376 aa19.08■□□□□ 0.64
SSBP3-202ENST00000357475 ACTR3CQ9C0K3 210 aaPredicted RBP19.08■□□□□ 0.64
SSBP3-202ENST00000357475 G3V4G9 280 aa19.07■□□□□ 0.64
SSBP3-202ENST00000357475 H3BTX0 84 aa19.07■□□□□ 0.64
SSBP3-202ENST00000357475 S100A7AQ86SG5 101 aa19.07■□□□□ 0.64
SSBP3-202ENST00000357475 S100A7P31151 101 aa19.06■□□□□ 0.64
SSBP3-202ENST00000357475 TFPI2P48307 235 aa19.06■□□□□ 0.64
SSBP3-202ENST00000357475 INSL3P51460 131 aa19.06■□□□□ 0.64
SSBP3-202ENST00000357475 TEX261Q6UWH6 196 aa19.06■□□□□ 0.64
SSBP3-202ENST00000357475 H3BQ15 152 aa19.05■□□□□ 0.64
SSBP3-202ENST00000357475 WIPF1O43516 503 aa19.05■□□□□ 0.64
SSBP3-202ENST00000357475 OR10J4P0C629 311 aa19.05■□□□□ 0.64
SSBP3-202ENST00000357475 RPL7P18124 248 aaKnown RBP19.05■□□□□ 0.64
SSBP3-202ENST00000357475 FGF8P55075 233 aaPredicted RBP19.05■□□□□ 0.64
SSBP3-202ENST00000357475 LCN15Q6UWW0 184 aa19.05■□□□□ 0.64
SSBP3-202ENST00000357475 STXBP6Q8NFX7 210 aa19.05■□□□□ 0.64
SSBP3-202ENST00000357475 CTXND1A0A1B0GTU2 59 aa19.05■□□□□ 0.64
SSBP3-202ENST00000357475 ZNF785A8K8V0 405 aa19.05■□□□□ 0.64
SSBP3-202ENST00000357475 OR7C2O60412 319 aa19.05■□□□□ 0.64
SSBP3-202ENST00000357475 STAG3L2P0CL84 134 aa19.05■□□□□ 0.64
SSBP3-202ENST00000357475 STAG3L3P0CL85 134 aa19.05■□□□□ 0.64
SSBP3-202ENST00000357475 ARL14EPLP0DKL9 152 aa19.05■□□□□ 0.64
SSBP3-202ENST00000357475 IGLC2P0DOY2 106 aa19.05■□□□□ 0.64
SSBP3-202ENST00000357475 RBPMS2Q6ZRY4 209 aaKnown RBP19.05■□□□□ 0.64
SSBP3-202ENST00000357475 BPIFA4PQ86YQ2 179 aa19.05■□□□□ 0.64
SSBP3-202ENST00000357475 WFDC3Q8IUB2 231 aa19.05■□□□□ 0.64
SSBP3-202ENST00000357475 MS4A6AQ9H2W1 248 aa19.05■□□□□ 0.64
SSBP3-202ENST00000357475 HELTA6NFD8 242 aa19.04■□□□□ 0.64
SSBP3-202ENST00000357475 TSPAN4O14817 238 aa19.04■□□□□ 0.64
SSBP3-202ENST00000357475 GALR1P47211 349 aa19.04■□□□□ 0.64
SSBP3-202ENST00000357475 KHDC3LQ587J8 217 aa19.04■□□□□ 0.64
SSBP3-202ENST00000357475 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa19.04■□□□□ 0.64
SSBP3-202ENST00000357475 ZNF680Q8NEM1 530 aa19.04■□□□□ 0.64
SSBP3-202ENST00000357475 FXYD5Q96DB9 178 aa19.04■□□□□ 0.64
SSBP3-202ENST00000357475 PAXXQ9BUH6 204 aa19.04■□□□□ 0.64
SSBP3-202ENST00000357475 OR51M1Q9H341 326 aa19.04■□□□□ 0.64
SSBP3-202ENST00000357475 ZNF586Q9NXT0 402 aa19.04■□□□□ 0.64
SSBP3-202ENST00000357475 TMEM14CQ9P0S9 112 aa19.04■□□□□ 0.64
SSBP3-202ENST00000357475 IFITM2Q01629 132 aa19.03■□□□□ 0.64
SSBP3-202ENST00000357475 GUCA2BQ16661 112 aa19.03■□□□□ 0.64
SSBP3-202ENST00000357475 FAM24BQ8N5W8 94 aa19.03■□□□□ 0.64
SSBP3-202ENST00000357475 GPR82Q96P67 336 aa19.03■□□□□ 0.64
SSBP3-202ENST00000357475 MGAM2Q2M2H8 2515 aa19.03■□□□□ 0.64
SSBP3-202ENST00000357475 A0A1B0GV50 99 aa19.02■□□□□ 0.64
SSBP3-202ENST00000357475 MAP1LC3B2A6NCE7 125 aa19.02■□□□□ 0.64
SSBP3-202ENST00000357475 TAS2R45P59539 299 aa19.02■□□□□ 0.64
SSBP3-202ENST00000357475 SAMD5Q5TGI4 173 aa19.02■□□□□ 0.64
SSBP3-202ENST00000357475 DPPA3Q6W0C5 159 aa19.02■□□□□ 0.64
SSBP3-202ENST00000357475 DCANP1Q8TF63 244 aa19.02■□□□□ 0.64
SSBP3-202ENST00000357475 MAP1LC3BQ9GZQ8 125 aa19.02■□□□□ 0.64
SSBP3-202ENST00000357475 SLC17A3O00476 420 aa19.01■□□□□ 0.63
SSBP3-202ENST00000357475 ATF4P18848 351 aaPredicted RBP19.01■□□□□ 0.63
SSBP3-202ENST00000357475 RAB5CP51148 216 aa19.01■□□□□ 0.63
SSBP3-202ENST00000357475 IGFL4Q6B9Z1 124 aa19.01■□□□□ 0.63
SSBP3-202ENST00000357475 LCN12Q6JVE5 192 aa19.01■□□□□ 0.63
SSBP3-202ENST00000357475 OR2K2Q8NGT1 345 aa19.01■□□□□ 0.63
SSBP3-202ENST00000357475 RNF141Q8WVD5 230 aa19.01■□□□□ 0.63
SSBP3-202ENST00000357475 TMPRSS5Q9H3S3 457 aa19.01■□□□□ 0.63
SSBP3-202ENST00000357475 NRN1Q9NPD7 142 aa19.01■□□□□ 0.63
SSBP3-202ENST00000357475 ZNF256Q9Y2P7 627 aaPredicted RBP19.01■□□□□ 0.63
SSBP3-202ENST00000357475 SORL1Q92673 2214 aa19.01■□□□□ 0.63
SSBP3-202ENST00000357475 TRAV25A0A0B4J276 109 aa19■□□□□ 0.63
SSBP3-202ENST00000357475 KRTAP10-11P60412 298 aa19■□□□□ 0.63
SSBP3-202ENST00000357475 BLNKQ8WV28 456 aa19■□□□□ 0.63
SSBP3-202ENST00000357475 PCNPQ8WW12 178 aaKnown RBP19■□□□□ 0.63
SSBP3-202ENST00000357475 HRH4Q9H3N8 390 aa19■□□□□ 0.63
SSBP3-202ENST00000357475 RNF24Q9Y225 148 aa19■□□□□ 0.63
SSBP3-202ENST00000357475 DNAH3Q8TD57 4116 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms