RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 MBD6Q96DN6 1003 aa6.64□□□□□ -1.35
CDC42SE1-201ENST00000357235 TPPP3Q9BW30 176 aa6.64□□□□□ -1.35
CDC42SE1-201ENST00000357235 SPANXB1Q9NS25 103 aaPredicted RBP6.64□□□□□ -1.35
CDC42SE1-201ENST00000357235 PTPRBP23467 1997 aa6.64□□□□□ -1.35
CDC42SE1-201ENST00000357235 DIAPH2-AS1Q14236 149 aa6.64□□□□□ -1.35
CDC42SE1-201ENST00000357235 PDPNQ86YL7 162 aa6.64□□□□□ -1.35
CDC42SE1-201ENST00000357235 OR10X1Q8NGY0 326 aa6.64□□□□□ -1.35
CDC42SE1-201ENST00000357235 WIPF2Q8TF74 440 aaPredicted RBP6.64□□□□□ -1.35
CDC42SE1-201ENST00000357235 DAZAP1Q96EP5 407 aaKnown RBP6.64□□□□□ -1.35
CDC42SE1-201ENST00000357235 FAM167A-AS1Q96KT0 104 aa6.64□□□□□ -1.35
CDC42SE1-201ENST00000357235 ASCL2Q99929 193 aa6.64□□□□□ -1.35
CDC42SE1-201ENST00000357235 VGLL1Q99990 258 aa6.64□□□□□ -1.35
CDC42SE1-201ENST00000357235 FAM110AQ9BQ89 295 aa6.64□□□□□ -1.35
CDC42SE1-201ENST00000357235 RNF7Q9UBF6 113 aa6.64□□□□□ -1.35
CDC42SE1-201ENST00000357235 HSPB8Q9UJY1 196 aa6.64□□□□□ -1.35
CDC42SE1-201ENST00000357235 KALRNO60229 2985 aa6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 OR5AL1P0C617 328 aa6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 GAGE5Q13069 117 aa6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 GAGE6Q13070 117 aa6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 WFDC2Q14508 124 aa6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 RPRMLQ8N4K4 120 aa6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 FLYWCH2Q96CP2 140 aaKnown RBP6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 RAB9BQ9NP90 201 aa6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 ZNF71Q9NQZ8 489 aaPredicted RBP6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 SSUH2Q9Y2M2 353 aa6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 TRAV8-1A0A0A6YYK1 113 aa6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 A0A1B0GW15 77 aa6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 F8W1H4 67 aa6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 LIPFP07098 398 aa6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 SPINK8P0C7L1 97 aa6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 C2orf83Q53S99 150 aa6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 ZNF329Q86UD4 541 aa6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 OR1L8Q8NGR8 309 aa6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 CHCHD1Q96BP2 118 aaKnown RBP6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 GRAMD2BQ96HH9 432 aa6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 URB1-AS1Q96HZ7 61 aa6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 HIF1ANQ9NWT6 349 aa6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 MRPL36Q9P0J6 103 aaKnown RBP6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 DMXL1Q9Y485 3027 aa6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 A1L4Q6 167 aa6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 VWC2LB2RUY7 222 aa6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 CHEK1O14757 476 aa6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 OR2J3O76001 311 aa6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 SMIM13P0DJ93 91 aa6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 WT1-ASQ06250 92 aa6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 ODF1Q14990 250 aa6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 ETDBQ3ZM63 59 aa6.63□□□□□ -1.35
CDC42SE1-201ENST00000357235 RIF1Q5UIP0 2472 aaKnown RBP6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 CSMD1Q96PZ7 3565 aa6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 IGLV1-44P01699 117 aa6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 P01737 135 aa6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 CD59P13987 128 aa6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 WT1P19544 449 aaPredicted RBP6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 FCGR2BP31994 310 aaPredicted RBP6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 GUSBP1Q15486 140 aa6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 PATE2Q6UY27 113 aa6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 MRPL32Q9BYC8 188 aaKnown RBP6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 RALYQ9UKM9 306 aaKnown RBP6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 ERG28Q9UKR5 140 aa6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 CYSLTR1Q9Y271 337 aa6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 SLC25A15Q9Y619 301 aa6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 B5MCH6 92 aa6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 FAM87AP0C7U9 286 aa6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 CGB3P0DN86 165 aa6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 CGB7P0DN87 165 aa6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 DLX1P56177 255 aa6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 HBBP68871 147 aa6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 LINC00322Q6ZN03 302 aaPredicted RBP6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 C8orf86Q6ZUL3 223 aa6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 SH2D6Q7Z4S9 175 aa6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 C1orf162Q8NEQ5 155 aaPredicted RBP6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 PRSS33Q8NF86 280 aa6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 OR1L4Q8NGR5 311 aa6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 DPF1Q92782 380 aa6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 GPR82Q96P67 336 aa6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 RPUSD1Q9UJJ7 312 aaKnown RBP6.62□□□□□ -1.35
CDC42SE1-201ENST00000357235 hADV38S2A0JD32 116 aa6.61□□□□□ -1.35
CDC42SE1-201ENST00000357235 TCF15Q12870 199 aa6.61□□□□□ -1.35
CDC42SE1-201ENST00000357235 CR1LQ2VPA4 569 aa6.61□□□□□ -1.35
CDC42SE1-201ENST00000357235 LINC01545Q5VT33 79 aa6.61□□□□□ -1.35
CDC42SE1-201ENST00000357235 SLC25A48Q6ZT89 311 aaKnown RBP6.61□□□□□ -1.35
CDC42SE1-201ENST00000357235 SMIM20Q8N5G0 67 aa6.61□□□□□ -1.35
CDC42SE1-201ENST00000357235 OR9G4Q8NGQ1 327 aa6.61□□□□□ -1.35
CDC42SE1-201ENST00000357235 CCL17Q92583 94 aa6.61□□□□□ -1.35
CDC42SE1-201ENST00000357235 GAFA1Q96PS6 74 aa6.61□□□□□ -1.35
CDC42SE1-201ENST00000357235 ANAPC13Q9BS18 74 aa6.61□□□□□ -1.35
CDC42SE1-201ENST00000357235 TPSG1Q9NRR2 321 aa6.61□□□□□ -1.35
CDC42SE1-201ENST00000357235 EPDR1Q9UM22 224 aa6.61□□□□□ -1.35
CDC42SE1-201ENST00000357235 IGHV1-46P01743 117 aa6.61□□□□□ -1.35
CDC42SE1-201ENST00000357235 COL8A1P27658 744 aa6.61□□□□□ -1.35
CDC42SE1-201ENST00000357235 ARL3P36405 182 aa6.61□□□□□ -1.35
CDC42SE1-201ENST00000357235 FAM27E3Q08E93 113 aa6.61□□□□□ -1.35
CDC42SE1-201ENST00000357235 DEFB109BQ30KR1 87 aa6.61□□□□□ -1.35
CDC42SE1-201ENST00000357235 RUSC1-AS1Q66K80 236 aa6.61□□□□□ -1.35
CDC42SE1-201ENST00000357235 OR4X2Q8NGF9 303 aa6.61□□□□□ -1.35
CDC42SE1-201ENST00000357235 FXYD5Q96DB9 178 aa6.61□□□□□ -1.35
CDC42SE1-201ENST00000357235 NDUFA4L2Q9NRX3 87 aa6.61□□□□□ -1.35
CDC42SE1-201ENST00000357235 TACC2O95359 2948 aa6.61□□□□□ -1.35
CDC42SE1-201ENST00000357235 ZFHX2Q9C0A1 2572 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms