RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 TXNDC17Q9BRA2 123 aa10.5□□□□□ -0.73
HOXA1-202ENST00000355633 RNF24Q9Y225 148 aa10.5□□□□□ -0.73
HOXA1-202ENST00000355633 BAHCC1Q9P281 2608 aa10.49□□□□□ -0.73
HOXA1-202ENST00000355633 NDUFA4O00483 81 aa10.49□□□□□ -0.73
HOXA1-202ENST00000355633 NDUFS6O75380 124 aaKnown RBP10.49□□□□□ -0.73
HOXA1-202ENST00000355633 SOHLH1Q5JUK2 328 aa10.49□□□□□ -0.73
HOXA1-202ENST00000355633 BPIFA4PQ86YQ2 179 aa10.49□□□□□ -0.73
HOXA1-202ENST00000355633 C16orf95Q9H693 158 aa10.49□□□□□ -0.73
HOXA1-202ENST00000355633 TMEM14CQ9P0S9 112 aa10.49□□□□□ -0.73
HOXA1-202ENST00000355633 CARHSP1Q9Y2V2 147 aaKnown RBP10.49□□□□□ -0.73
HOXA1-202ENST00000355633 FLNBO75369 2602 aaKnown RBP10.48□□□□□ -0.73
HOXA1-202ENST00000355633 CRLF1O75462 422 aa10.48□□□□□ -0.73
HOXA1-202ENST00000355633 ARL6IP6Q8N6S5 226 aa10.48□□□□□ -0.73
HOXA1-202ENST00000355633 C20orf24Q9BUV8 137 aa10.48□□□□□ -0.73
HOXA1-202ENST00000355633 A0A1W2PRE2 83 aa10.48□□□□□ -0.73
HOXA1-202ENST00000355633 CLPSL1A2RUU4 121 aa10.48□□□□□ -0.73
HOXA1-202ENST00000355633 TMEM250H0YL14 139 aa10.48□□□□□ -0.73
HOXA1-202ENST00000355633 TCF21O43680 179 aa10.48□□□□□ -0.73
HOXA1-202ENST00000355633 PDE6DO43924 150 aa10.48□□□□□ -0.73
HOXA1-202ENST00000355633 SNRPCP09234 159 aaKnown RBP10.48□□□□□ -0.73
HOXA1-202ENST00000355633 LGALS1P09382 135 aaKnown RBP10.48□□□□□ -0.73
HOXA1-202ENST00000355633 NBEAP1P0C6P0 100 aa10.48□□□□□ -0.73
HOXA1-202ENST00000355633 MEOX2P50222 304 aa10.48□□□□□ -0.73
HOXA1-202ENST00000355633 BLNKQ8WV28 456 aa10.48□□□□□ -0.73
HOXA1-202ENST00000355633 METTL26Q96S19 204 aa10.48□□□□□ -0.73
HOXA1-202ENST00000355633 F6UZH7 168 aa10.47□□□□□ -0.73
HOXA1-202ENST00000355633 FAM90A2PQ658T7 463 aa10.47□□□□□ -0.73
HOXA1-202ENST00000355633 OR4F17Q8NGA8 305 aa10.47□□□□□ -0.73
HOXA1-202ENST00000355633 LINC01006Q8NI28 216 aa10.47□□□□□ -0.73
HOXA1-202ENST00000355633 MTORP42345 2549 aa10.47□□□□□ -0.73
HOXA1-202ENST00000355633 ZNF207O43670 478 aaKnown RBP10.46□□□□□ -0.73
HOXA1-202ENST00000355633 HIST1H1EP10412 219 aaKnown RBP10.46□□□□□ -0.73
HOXA1-202ENST00000355633 NPPCP23582 126 aa10.46□□□□□ -0.73
HOXA1-202ENST00000355633 AKR1D1P51857 326 aa10.46□□□□□ -0.73
HOXA1-202ENST00000355633 GUCA2BQ16661 112 aa10.46□□□□□ -0.73
HOXA1-202ENST00000355633 UNQ9165/PRO28630Q6UXU0 137 aa10.46□□□□□ -0.73
HOXA1-202ENST00000355633 HIVEP1P15822 2718 aa10.46□□□□□ -0.74
HOXA1-202ENST00000355633 CYSRT1A8MQ03 144 aa10.46□□□□□ -0.74
HOXA1-202ENST00000355633 GGTLC3B5MD39 225 aa10.46□□□□□ -0.74
HOXA1-202ENST00000355633 MRPS12O15235 138 aaKnown RBP10.46□□□□□ -0.74
HOXA1-202ENST00000355633 NDUFA7O95182 113 aa10.46□□□□□ -0.74
HOXA1-202ENST00000355633 RPL7P18124 248 aaKnown RBP10.46□□□□□ -0.74
HOXA1-202ENST00000355633 SUMO1P63165 101 aaKnown RBP10.46□□□□□ -0.74
HOXA1-202ENST00000355633 OR8I2Q8N0Y5 310 aa10.46□□□□□ -0.74
HOXA1-202ENST00000355633 SVBPQ8N300 66 aa10.46□□□□□ -0.74
HOXA1-202ENST00000355633 NKX6-2Q9C056 277 aaPredicted RBP10.46□□□□□ -0.74
HOXA1-202ENST00000355633 ZNF586Q9NXT0 402 aa10.46□□□□□ -0.74
HOXA1-202ENST00000355633 CUBNO60494 3623 aa10.45□□□□□ -0.74
HOXA1-202ENST00000355633 ZNF320A2RRD8 509 aa10.45□□□□□ -0.74
HOXA1-202ENST00000355633 H3BQ15 152 aa10.45□□□□□ -0.74
HOXA1-202ENST00000355633 BUB3O43684 328 aa10.45□□□□□ -0.74
HOXA1-202ENST00000355633 IGLC2P0DOY2 106 aa10.45□□□□□ -0.74
HOXA1-202ENST00000355633 CRYBB3P26998 211 aa10.45□□□□□ -0.74
HOXA1-202ENST00000355633 RPL35P42766 123 aaKnown RBP10.45□□□□□ -0.74
HOXA1-202ENST00000355633 CDX1P47902 265 aaPredicted RBP10.45□□□□□ -0.74
HOXA1-202ENST00000355633 RPEL1Q2QD12 228 aa10.45□□□□□ -0.74
HOXA1-202ENST00000355633 FAM106AQ4KMX7 169 aa10.45□□□□□ -0.74
HOXA1-202ENST00000355633 TCTEX1D4Q5JR98 221 aa10.45□□□□□ -0.74
HOXA1-202ENST00000355633 WIPF2Q8TF74 440 aaPredicted RBP10.45□□□□□ -0.74
HOXA1-202ENST00000355633 TMEM190Q8WZ59 177 aa10.45□□□□□ -0.74
HOXA1-202ENST00000355633 SCO2A0A1W2PP80 73 aa10.45□□□□□ -0.74
HOXA1-202ENST00000355633 H3BTX0 84 aa10.45□□□□□ -0.74
HOXA1-202ENST00000355633 RANP62826 216 aaKnown RBP10.45□□□□□ -0.74
HOXA1-202ENST00000355633 KHDC1LQ5JSQ8 128 aa10.45□□□□□ -0.74
HOXA1-202ENST00000355633 RPUSD4Q96CM3 377 aaKnown RBP10.45□□□□□ -0.74
HOXA1-202ENST00000355633 PPP1R14DQ9NXH3 145 aa10.45□□□□□ -0.74
HOXA1-202ENST00000355633 IGHV3-66A0A0C4DH42 116 aa10.44□□□□□ -0.74
HOXA1-202ENST00000355633 APOHP02749 345 aaPredicted RBP10.44□□□□□ -0.74
HOXA1-202ENST00000355633 ZNF674Q2M3X9 581 aa10.44□□□□□ -0.74
HOXA1-202ENST00000355633 C1orf194Q5T5A4 169 aa10.44□□□□□ -0.74
HOXA1-202ENST00000355633 GPHB5Q86YW7 130 aa10.44□□□□□ -0.74
HOXA1-202ENST00000355633 PARLQ9H300 379 aa10.44□□□□□ -0.74
HOXA1-202ENST00000355633 U3KQE9 123 aa10.44□□□□□ -0.74
HOXA1-202ENST00000355633 TRBV19A0A075B6N1 114 aa10.43□□□□□ -0.74
HOXA1-202ENST00000355633 IGHV4OR15-8A0A075B7B6 117 aa10.43□□□□□ -0.74
HOXA1-202ENST00000355633 IGHV3OR16-13A0A075B7E8 117 aa10.43□□□□□ -0.74
HOXA1-202ENST00000355633 A0A087WW49 117 aa10.43□□□□□ -0.74
HOXA1-202ENST00000355633 IGHV3-49A0A0A0MS15 119 aa10.43□□□□□ -0.74
HOXA1-202ENST00000355633 IGHV3-74A0A0B4J1X5 117 aa10.43□□□□□ -0.74
HOXA1-202ENST00000355633 ZNF727A8MUV8 499 aa10.43□□□□□ -0.74
HOXA1-202ENST00000355633 NDUFB4O95168 129 aa10.43□□□□□ -0.74
HOXA1-202ENST00000355633 C4orf3Q8WVX3 66 aa10.43□□□□□ -0.74
HOXA1-202ENST00000355633 C11orf52Q96A22 123 aa10.43□□□□□ -0.74
HOXA1-202ENST00000355633 GPR82Q96P67 336 aa10.43□□□□□ -0.74
HOXA1-202ENST00000355633 SMIM7Q9BQ49 75 aa10.43□□□□□ -0.74
HOXA1-202ENST00000355633 NIPSNAP3BQ9BS92 247 aa10.43□□□□□ -0.74
HOXA1-202ENST00000355633 ELOVL1Q9BW60 279 aa10.43□□□□□ -0.74
HOXA1-202ENST00000355633 LINC00587B1AMM8 73 aa10.43□□□□□ -0.74
HOXA1-202ENST00000355633 HAX1O00165 279 aa10.43□□□□□ -0.74
HOXA1-202ENST00000355633 FAM74A3Q4VXF1 159 aa10.43□□□□□ -0.74
HOXA1-202ENST00000355633 C18orf65Q6ZTR6 163 aa10.43□□□□□ -0.74
HOXA1-202ENST00000355633 C17orf77Q96MU5 243 aa10.43□□□□□ -0.74
HOXA1-202ENST00000355633 Q9H3A6 140 aa10.43□□□□□ -0.74
HOXA1-202ENST00000355633 BIN3Q9NQY0 253 aa10.43□□□□□ -0.74
HOXA1-202ENST00000355633 RNF114Q9Y508 228 aa10.43□□□□□ -0.74
HOXA1-202ENST00000355633 FN1P02751 2386 aaKnown RBP10.42□□□□□ -0.74
HOXA1-202ENST00000355633 PGPA6NDG6 321 aa10.42□□□□□ -0.74
HOXA1-202ENST00000355633 MYCNOSP40205 109 aa10.42□□□□□ -0.74
HOXA1-202ENST00000355633 SRSF2Q01130 221 aaKnown RBP10.42□□□□□ -0.74
HOXA1-202ENST00000355633 ZNF124Q15973 351 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms