RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 C9orf139Q6ZV77 190 aa10.39□□□□□ -0.75
SYNCRIP-201ENST00000355238 FREM3P0C091 2139 aa10.39□□□□□ -0.75
SYNCRIP-201ENST00000355238 TIMM23O14925 209 aa10.38□□□□□ -0.75
SYNCRIP-201ENST00000355238 PDE6HQ13956 83 aa10.38□□□□□ -0.75
SYNCRIP-201ENST00000355238 ZNF688P0C7X2 276 aa10.38□□□□□ -0.75
SYNCRIP-201ENST00000355238 RNASE2P10153 161 aaKnown RBP10.38□□□□□ -0.75
SYNCRIP-201ENST00000355238 ZNF726P1Q15940 193 aa10.38□□□□□ -0.75
SYNCRIP-201ENST00000355238 FDCSPQ8NFU4 85 aa10.38□□□□□ -0.75
SYNCRIP-201ENST00000355238 PAX4O43316 350 aa10.38□□□□□ -0.75
SYNCRIP-201ENST00000355238 IGHV3-11P01762 117 aa10.38□□□□□ -0.75
SYNCRIP-201ENST00000355238 SP9P0CG40 484 aa10.38□□□□□ -0.75
SYNCRIP-201ENST00000355238 TMEM75Q8N9X5 138 aa10.38□□□□□ -0.75
SYNCRIP-201ENST00000355238 FAM104BQ5XKR9 115 aa10.38□□□□□ -0.75
SYNCRIP-201ENST00000355238 PRSS46E5RG02 174 aa10.38□□□□□ -0.75
SYNCRIP-201ENST00000355238 C9orf106Q8NAJ2 232 aa10.38□□□□□ -0.75
SYNCRIP-201ENST00000355238 IGLC7A0M8Q6 106 aa10.37□□□□□ -0.75
SYNCRIP-201ENST00000355238 UTF1Q5T230 341 aa10.37□□□□□ -0.75
SYNCRIP-201ENST00000355238 OR11H6Q8NGC7 330 aa10.37□□□□□ -0.75
SYNCRIP-201ENST00000355238 KLHDC3Q9BQ90 382 aa10.37□□□□□ -0.75
SYNCRIP-201ENST00000355238 LAMTOR3Q9UHA4 124 aa10.37□□□□□ -0.75
SYNCRIP-201ENST00000355238 ICE1Q9Y2F5 2266 aa10.37□□□□□ -0.75
SYNCRIP-201ENST00000355238 PAX9P55771 341 aa10.37□□□□□ -0.75
SYNCRIP-201ENST00000355238 COA6Q5JTJ3 125 aaKnown RBP10.37□□□□□ -0.75
SYNCRIP-201ENST00000355238 LYPD6BQ8NI32 183 aa10.37□□□□□ -0.75
SYNCRIP-201ENST00000355238 LINC00479Q96M42 142 aa10.37□□□□□ -0.75
SYNCRIP-201ENST00000355238 CEND1Q8N111 149 aa10.37□□□□□ -0.75
SYNCRIP-201ENST00000355238 TP53BP1Q12888 1972 aaPredicted RBP10.37□□□□□ -0.75
SYNCRIP-201ENST00000355238 GAGE12JA6NER3 117 aa10.37□□□□□ -0.75
SYNCRIP-201ENST00000355238 HAX1O00165 279 aa10.37□□□□□ -0.75
SYNCRIP-201ENST00000355238 GAGE7O76087 117 aa10.37□□□□□ -0.75
SYNCRIP-201ENST00000355238 GAGE12FP0CL80 117 aa10.37□□□□□ -0.75
SYNCRIP-201ENST00000355238 GAGE12GP0CL81 117 aa10.37□□□□□ -0.75
SYNCRIP-201ENST00000355238 GAGE12IP0CL82 117 aa10.37□□□□□ -0.75
SYNCRIP-201ENST00000355238 RPL15P61313 204 aaKnown RBP10.37□□□□□ -0.75
SYNCRIP-201ENST00000355238 GAGE4Q13068 117 aa10.37□□□□□ -0.75
SYNCRIP-201ENST00000355238 LY6G5BQ8NDX9 201 aa10.37□□□□□ -0.75
SYNCRIP-201ENST00000355238 JPT2Q9H910 190 aa10.37□□□□□ -0.75
SYNCRIP-201ENST00000355238 IGHV1-18A0A0C4DH31 117 aa10.37□□□□□ -0.75
SYNCRIP-201ENST00000355238 H0YJW9 148 aa10.37□□□□□ -0.75
SYNCRIP-201ENST00000355238 Q8N8P6 123 aa10.37□□□□□ -0.75
SYNCRIP-201ENST00000355238 PDCD11Q14690 1871 aaKnown RBP10.37□□□□□ -0.75
SYNCRIP-201ENST00000355238 ATP5J2P56134 94 aa10.36□□□□□ -0.75
SYNCRIP-201ENST00000355238 LCNL1Q6ZST4 164 aa10.36□□□□□ -0.75
SYNCRIP-201ENST00000355238 C5orf63A6NC05 138 aa10.36□□□□□ -0.75
SYNCRIP-201ENST00000355238 Q8TAT8 98 aa10.36□□□□□ -0.75
SYNCRIP-201ENST00000355238 TDRD6O60522 2096 aaKnown RBP10.36□□□□□ -0.75
SYNCRIP-201ENST00000355238 CYYR1Q96J86 154 aa10.36□□□□□ -0.75
SYNCRIP-201ENST00000355238 C1QTNF4Q9BXJ3 329 aa10.36□□□□□ -0.75
SYNCRIP-201ENST00000355238 ZNF474Q6S9Z5 364 aaPredicted RBP10.36□□□□□ -0.75
SYNCRIP-201ENST00000355238 CD177Q8N6Q3 437 aa10.36□□□□□ -0.75
SYNCRIP-201ENST00000355238 LINC01560Q8TB33 94 aa10.36□□□□□ -0.75
SYNCRIP-201ENST00000355238 RALGAPA1Q6GYQ0 2036 aa10.36□□□□□ -0.75
SYNCRIP-201ENST00000355238 TRACP01848 142 aa10.36□□□□□ -0.75
SYNCRIP-201ENST00000355238 FOXL2NBQ6ZUU3 175 aa10.36□□□□□ -0.75
SYNCRIP-201ENST00000355238 C14orf178Q8N769 122 aaPredicted RBP10.35□□□□□ -0.75
SYNCRIP-201ENST00000355238 TMEM141Q96I45 108 aa10.35□□□□□ -0.75
SYNCRIP-201ENST00000355238 LOC285556D6RIA3 1793 aa10.35□□□□□ -0.75
SYNCRIP-201ENST00000355238 GAGE5Q13069 117 aa10.35□□□□□ -0.75
SYNCRIP-201ENST00000355238 GAGE6Q13070 117 aa10.35□□□□□ -0.75
SYNCRIP-201ENST00000355238 FHL1Q13642 323 aa10.35□□□□□ -0.75
SYNCRIP-201ENST00000355238 GGNQ86UU5 652 aa10.35□□□□□ -0.75
SYNCRIP-201ENST00000355238 MDC1Q14676 2089 aaKnown RBP10.35□□□□□ -0.75
SYNCRIP-201ENST00000355238 MPDZO75970 2070 aa10.35□□□□□ -0.75
SYNCRIP-201ENST00000355238 IGHV2-70DA0A0C4DH43 119 aa10.35□□□□□ -0.75
SYNCRIP-201ENST00000355238 IGHV1-46P01743 117 aa10.35□□□□□ -0.75
SYNCRIP-201ENST00000355238 TCF15Q12870 199 aa10.35□□□□□ -0.75
SYNCRIP-201ENST00000355238 C5orf24Q7Z6I8 188 aa10.35□□□□□ -0.75
SYNCRIP-201ENST00000355238 STHQ8IWL8 128 aa10.35□□□□□ -0.75
SYNCRIP-201ENST00000355238 BOD1L2Q8IYS8 172 aa10.35□□□□□ -0.75
SYNCRIP-201ENST00000355238 VGLL1Q99990 258 aa10.35□□□□□ -0.75
SYNCRIP-201ENST00000355238 ZNF581Q9P0T4 197 aa10.35□□□□□ -0.75
SYNCRIP-201ENST00000355238 CFHR2P36980 270 aa10.35□□□□□ -0.75
SYNCRIP-201ENST00000355238 MYOFQ9NZM1 2061 aa10.35□□□□□ -0.75
SYNCRIP-201ENST00000355238 SOCS3O14543 225 aa10.34□□□□□ -0.75
SYNCRIP-201ENST00000355238 SHANK2-AS3Q9BTD1 123 aa10.34□□□□□ -0.75
SYNCRIP-201ENST00000355238 DEFB125Q8N687 156 aa10.34□□□□□ -0.75
SYNCRIP-201ENST00000355238 SRSF8Q9BRL6 282 aaKnown RBP10.34□□□□□ -0.75
SYNCRIP-201ENST00000355238 C11orf52Q96A22 123 aa10.34□□□□□ -0.75
SYNCRIP-201ENST00000355238 ESPL1Q14674 2120 aa10.34□□□□□ -0.75
SYNCRIP-201ENST00000355238 IGHV1-3A0A0C4DH29 117 aa10.34□□□□□ -0.75
SYNCRIP-201ENST00000355238 CLPSP04118 112 aa10.34□□□□□ -0.75
SYNCRIP-201ENST00000355238 DPH3Q96FX2 82 aa10.34□□□□□ -0.75
SYNCRIP-201ENST00000355238 CCL25O15444 150 aa10.34□□□□□ -0.75
SYNCRIP-201ENST00000355238 FCN3O75636 299 aa10.34□□□□□ -0.75
SYNCRIP-201ENST00000355238 C15orf32Q32M92 178 aa10.34□□□□□ -0.75
SYNCRIP-201ENST00000355238 CHCHD5Q9BSY4 110 aa10.34□□□□□ -0.75
SYNCRIP-201ENST00000355238 TRGV4A0A0C4DH28 118 aa10.33□□□□□ -0.75
SYNCRIP-201ENST00000355238 IGHV1-8P0DP01 117 aa10.33□□□□□ -0.75
SYNCRIP-201ENST00000355238 SLC25A16P16260 332 aa10.33□□□□□ -0.75
SYNCRIP-201ENST00000355238 CDPF1Q6NVV7 123 aa10.33□□□□□ -0.75
SYNCRIP-201ENST00000355238 COLCA1Q6ZS62 124 aa10.33□□□□□ -0.76
SYNCRIP-201ENST00000355238 TMEM213A2RRL7 107 aa10.33□□□□□ -0.76
SYNCRIP-201ENST00000355238 SRRM4A7MD48 611 aaKnown RBP10.33□□□□□ -0.76
SYNCRIP-201ENST00000355238 H3BMG7 143 aa10.33□□□□□ -0.76
SYNCRIP-201ENST00000355238 PRSS57Q6UWY2 283 aa10.33□□□□□ -0.76
SYNCRIP-201ENST00000355238 TMEM200BQ69YZ2 307 aa10.33□□□□□ -0.76
SYNCRIP-201ENST00000355238 ZCCHC24Q8N2G6 241 aaKnown RBP10.33□□□□□ -0.76
SYNCRIP-201ENST00000355238 C20orf204Q6ZNR8 217 aa10.33□□□□□ -0.76
SYNCRIP-201ENST00000355238 SPACA3Q8IXA5 215 aa10.33□□□□□ -0.76
SYNCRIP-201ENST00000355238 RCHY1Q96PM5 261 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms