RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 MRPL23Q16540 153 aaKnown RBP6.66□□□□□ -1.34
HTT-201ENST00000355072 CCL4L1Q8NHW4 92 aa6.66□□□□□ -1.34
HTT-201ENST00000355072 KLK15Q9H2R5 256 aa6.66□□□□□ -1.34
HTT-201ENST00000355072 PSG1P11464 419 aa6.66□□□□□ -1.34
HTT-201ENST00000355072 CT62P0C5K7 136 aa6.66□□□□□ -1.34
HTT-201ENST00000355072 TMEM52Q8NDY8 209 aa6.66□□□□□ -1.34
HTT-201ENST00000355072 UBE2BP63146 152 aa6.66□□□□□ -1.34
HTT-201ENST00000355072 GTSCR1Q86UQ5 136 aa6.66□□□□□ -1.34
HTT-201ENST00000355072 ZAR1Q86SH2 424 aa6.66□□□□□ -1.34
HTT-201ENST00000355072 RPP25LQ8N5L8 163 aaKnown RBP6.66□□□□□ -1.34
HTT-201ENST00000355072 DUX5Q96PT3 197 aa6.66□□□□□ -1.34
HTT-201ENST00000355072 SPEM2Q0P670 501 aa6.66□□□□□ -1.34
HTT-201ENST00000355072 AMN1Q8IY45 258 aa6.66□□□□□ -1.34
HTT-201ENST00000355072 LOC102723996A0A087X1L8 192 aa6.66□□□□□ -1.34
HTT-201ENST00000355072 A0A1W2PQF6 199 aa6.66□□□□□ -1.34
HTT-201ENST00000355072 C9JAW5 83 aa6.66□□□□□ -1.34
HTT-201ENST00000355072 IGKV1-8A0A0C4DH67 115 aa6.65□□□□□ -1.34
HTT-201ENST00000355072 CD7P09564 240 aa6.65□□□□□ -1.34
HTT-201ENST00000355072 NOTCH4Q99466 2003 aa6.65□□□□□ -1.34
HTT-201ENST00000355072 FOXS1O43638 330 aa6.65□□□□□ -1.34
HTT-201ENST00000355072 MYF5P13349 255 aa6.65□□□□□ -1.34
HTT-201ENST00000355072 ZNF138P52744 262 aa6.65□□□□□ -1.34
HTT-201ENST00000355072 HERV-K104P63124 156 aa6.65□□□□□ -1.34
HTT-201ENST00000355072 CT55Q8WUE5 264 aa6.65□□□□□ -1.34
HTT-201ENST00000355072 HS3ST6Q96QI5 342 aa6.65□□□□□ -1.34
HTT-201ENST00000355072 BDP1A6H8Y1 2624 aa6.65□□□□□ -1.34
HTT-201ENST00000355072 TMSB15BA0A087X1C1 80 aa6.65□□□□□ -1.34
HTT-201ENST00000355072 C12orf77C9JDV5 145 aa6.65□□□□□ -1.34
HTT-201ENST00000355072 F8VRH5 84 aa6.65□□□□□ -1.34
HTT-201ENST00000355072 CCL3P10147 92 aa6.65□□□□□ -1.34
HTT-201ENST00000355072 VEGFBP49765 207 aa6.65□□□□□ -1.34
HTT-201ENST00000355072 E9PQ18 207 aa6.65□□□□□ -1.34
HTT-201ENST00000355072 GUSBP11Q6P575 273 aa6.65□□□□□ -1.34
HTT-201ENST00000355072 C18orf32Q8TCD1 76 aa6.65□□□□□ -1.34
HTT-201ENST00000355072 PYGO2Q9BRQ0 406 aa6.65□□□□□ -1.34
HTT-201ENST00000355072 PRDM6Q9NQX0 595 aa6.65□□□□□ -1.34
HTT-201ENST00000355072 JMJD7-PLA2G4BH0Y9G9 81 aa6.65□□□□□ -1.35
HTT-201ENST00000355072 SMIM10L1P0DMW3 83 aa6.65□□□□□ -1.35
HTT-201ENST00000355072 SMIM10Q96HG1 83 aa6.65□□□□□ -1.35
HTT-201ENST00000355072 LDLRAD4O15165 306 aa6.65□□□□□ -1.35
HTT-201ENST00000355072 C3orf36Q3SXR2 165 aa6.65□□□□□ -1.35
HTT-201ENST00000355072 RFLNBQ8N5W9 214 aa6.65□□□□□ -1.35
HTT-201ENST00000355072 OCC1Q8TAD7 63 aa6.65□□□□□ -1.35
HTT-201ENST00000355072 PATE1Q8WXA2 126 aa6.65□□□□□ -1.35
HTT-201ENST00000355072 HIGD1BQ9P298 99 aa6.65□□□□□ -1.35
HTT-201ENST00000355072 IGKV1D-16P01601 117 aa6.65□□□□□ -1.35
HTT-201ENST00000355072 ERCC8Q13216 396 aa6.65□□□□□ -1.35
HTT-201ENST00000355072 FOXI2Q6ZQN5 318 aa6.65□□□□□ -1.35
HTT-201ENST00000355072 POLR3KQ9Y2Y1 108 aaPredicted RBP6.65□□□□□ -1.35
HTT-201ENST00000355072 DUX3Q96PT4 197 aa6.65□□□□□ -1.35
HTT-201ENST00000355072 CCL7P80098 99 aa6.65□□□□□ -1.35
HTT-201ENST00000355072 CXCL1P09341 107 aa6.64□□□□□ -1.35
HTT-201ENST00000355072 SUPT4H1P63272 117 aaKnown RBP6.64□□□□□ -1.35
HTT-201ENST00000355072 TFF3Q07654 80 aa6.64□□□□□ -1.35
HTT-201ENST00000355072 CHCHD2Q9Y6H1 151 aaPredicted RBP6.64□□□□□ -1.35
HTT-201ENST00000355072 SLURP2P0DP57 97 aa6.64□□□□□ -1.35
HTT-201ENST00000355072 STPG4Q8N801 248 aa6.64□□□□□ -1.35
HTT-201ENST00000355072 CCL2P13500 99 aa6.64□□□□□ -1.35
HTT-201ENST00000355072 WDR87Q6ZQQ6 2873 aa6.64□□□□□ -1.35
HTT-201ENST00000355072 GREM1O60565 184 aa6.64□□□□□ -1.35
HTT-201ENST00000355072 GATD1Q8NB37 220 aa6.64□□□□□ -1.35
HTT-201ENST00000355072 H3BT86 120 aa6.64□□□□□ -1.35
HTT-201ENST00000355072 NPYP01303 97 aa6.64□□□□□ -1.35
HTT-201ENST00000355072 TDGF1P13385 188 aa6.64□□□□□ -1.35
HTT-201ENST00000355072 C11orf52Q96A22 123 aa6.64□□□□□ -1.35
HTT-201ENST00000355072 F6UB75 175 aa6.64□□□□□ -1.35
HTT-201ENST00000355072 I3L3M4 83 aa6.64□□□□□ -1.35
HTT-201ENST00000355072 NDUFB1O75438 58 aa6.64□□□□□ -1.35
HTT-201ENST00000355072 INSP01308 110 aa6.64□□□□□ -1.35
HTT-201ENST00000355072 SS18Q15532 418 aa6.64□□□□□ -1.35
HTT-201ENST00000355072 TRGV2A0A075B6R0 118 aa6.64□□□□□ -1.35
HTT-201ENST00000355072 MRPS36P82909 103 aaKnown RBP6.64□□□□□ -1.35
HTT-201ENST00000355072 ZNF385AQ96PM9 386 aaKnown RBP6.64□□□□□ -1.35
HTT-201ENST00000355072 SNHG12Q9BXW3 62 aa6.64□□□□□ -1.35
HTT-201ENST00000355072 DEFB125Q8N687 156 aa6.64□□□□□ -1.35
HTT-201ENST00000355072 UCN2Q96RP3 112 aa6.64□□□□□ -1.35
HTT-201ENST00000355072 COL5A1P20908 1838 aaPredicted RBP6.64□□□□□ -1.35
HTT-201ENST00000355072 PTPRBP23467 1997 aa6.64□□□□□ -1.35
HTT-201ENST00000355072 HCP5Q6MZN7 132 aa6.63□□□□□ -1.35
HTT-201ENST00000355072 MSGN1A6NI15 193 aa6.63□□□□□ -1.35
HTT-201ENST00000355072 PRSS41Q7RTY9 318 aa6.63□□□□□ -1.35
HTT-201ENST00000355072 Q8N8P6 123 aa6.63□□□□□ -1.35
HTT-201ENST00000355072 KLF5Q13887 457 aaPredicted RBP6.63□□□□□ -1.35
HTT-201ENST00000355072 C5orf47Q569G3 176 aa6.63□□□□□ -1.35
HTT-201ENST00000355072 M0R1W7 72 aa6.63□□□□□ -1.35
HTT-201ENST00000355072 SSC4DQ8WTU2 575 aa6.63□□□□□ -1.35
HTT-201ENST00000355072 IGHV1-69DA0A0B4J2H0 117 aa6.63□□□□□ -1.35
HTT-201ENST00000355072 HTN1P15515 57 aa6.63□□□□□ -1.35
HTT-201ENST00000355072 ADAMTS20P59510 1910 aa6.63□□□□□ -1.35
HTT-201ENST00000355072 TEX48A0A1B0GUV7 120 aa6.63□□□□□ -1.35
HTT-201ENST00000355072 LILRA1O75019 489 aa6.63□□□□□ -1.35
HTT-201ENST00000355072 LAIR2Q6ISS4 152 aa6.63□□□□□ -1.35
HTT-201ENST00000355072 FAM104BQ5XKR9 115 aa6.63□□□□□ -1.35
HTT-201ENST00000355072 TMEM133Q9H2Q1 129 aa6.63□□□□□ -1.35
HTT-201ENST00000355072 VDAC2P45880 294 aaPredicted RBP6.63□□□□□ -1.35
HTT-201ENST00000355072 DSCR9P59020 149 aa6.62□□□□□ -1.35
HTT-201ENST00000355072 ATRAIDQ6UW56 229 aa6.62□□□□□ -1.35
HTT-201ENST00000355072 DAZ1Q9NQZ3 744 aaKnown RBP6.62□□□□□ -1.35
HTT-201ENST00000355072 ADARB2-AS1A8MUL3 147 aa6.62□□□□□ -1.35
HTT-201ENST00000355072 GATA3P23771 443 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms