RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 PERPQ96FX8 193 aa11.05□□□□□ -0.64
TRIM4-201ENST00000349062 ZFP30Q9Y2G7 519 aa11.05□□□□□ -0.64
TRIM4-201ENST00000349062 CUBNO60494 3623 aa11.05□□□□□ -0.64
TRIM4-201ENST00000349062 IGKV1D-37A0A075B6S9 117 aa11.05□□□□□ -0.64
TRIM4-201ENST00000349062 NBR2O15453 112 aa11.05□□□□□ -0.64
TRIM4-201ENST00000349062 MRGPRG-AS1Q2M3A8 158 aa11.05□□□□□ -0.64
TRIM4-201ENST00000349062 TEX45Q8NA69 505 aa11.05□□□□□ -0.64
TRIM4-201ENST00000349062 CACNG8Q8WXS5 425 aa11.05□□□□□ -0.64
TRIM4-201ENST00000349062 RNF2Q99496 336 aa11.05□□□□□ -0.64
TRIM4-201ENST00000349062 IGHV3-66A0A0C4DH42 116 aa11.05□□□□□ -0.64
TRIM4-201ENST00000349062 HYPMO75409 117 aa11.05□□□□□ -0.64
TRIM4-201ENST00000349062 HSBP1O75506 76 aa11.05□□□□□ -0.64
TRIM4-201ENST00000349062 C3orf79P0CE67 100 aa11.05□□□□□ -0.64
TRIM4-201ENST00000349062 CEACAM3P40198 252 aa11.05□□□□□ -0.64
TRIM4-201ENST00000349062 YPEL3P61236 119 aaPredicted RBP11.05□□□□□ -0.64
TRIM4-201ENST00000349062 RNASEKQ6P5S7 137 aaKnown RBP11.05□□□□□ -0.64
TRIM4-201ENST00000349062 BCL6BQ8N143 479 aaPredicted RBP11.05□□□□□ -0.64
TRIM4-201ENST00000349062 OR4B1Q8NGF8 309 aa11.05□□□□□ -0.64
TRIM4-201ENST00000349062 SOX21Q9Y651 276 aaPredicted RBP11.05□□□□□ -0.64
TRIM4-201ENST00000349062 CD99P14209 185 aa11.04□□□□□ -0.64
TRIM4-201ENST00000349062 TMEM11P17152 192 aa11.04□□□□□ -0.64
TRIM4-201ENST00000349062 EXOC3-AS1Q8N2X6 119 aa11.04□□□□□ -0.64
TRIM4-201ENST00000349062 NEU4Q8WWR8 484 aaPredicted RBP11.04□□□□□ -0.64
TRIM4-201ENST00000349062 UQCR10Q9UDW1 63 aa11.04□□□□□ -0.64
TRIM4-201ENST00000349062 ZNF331Q9NQX6 463 aaPredicted RBP11.04□□□□□ -0.64
TRIM4-201ENST00000349062 ISLRO14498 428 aa11.03□□□□□ -0.64
TRIM4-201ENST00000349062 CCL25O15444 150 aa11.03□□□□□ -0.64
TRIM4-201ENST00000349062 IL4P05112 153 aa11.03□□□□□ -0.64
TRIM4-201ENST00000349062 LINC00614P0C842 121 aa11.03□□□□□ -0.64
TRIM4-201ENST00000349062 FCGR2BP31994 310 aaPredicted RBP11.03□□□□□ -0.64
TRIM4-201ENST00000349062 UBE2G1P62253 170 aa11.03□□□□□ -0.64
TRIM4-201ENST00000349062 CX3CL1P78423 397 aa11.03□□□□□ -0.64
TRIM4-201ENST00000349062 RPL19P84098 196 aaKnown RBP11.03□□□□□ -0.64
TRIM4-201ENST00000349062 LY6EQ16553 131 aa11.03□□□□□ -0.64
TRIM4-201ENST00000349062 OR4C5Q8NGB2 326 aa11.03□□□□□ -0.64
TRIM4-201ENST00000349062 SSBP4Q9BWG4 385 aaPredicted RBP11.03□□□□□ -0.64
TRIM4-201ENST00000349062 SORL1Q92673 2214 aa11.03□□□□□ -0.64
TRIM4-201ENST00000349062 A0A1W2PS18 150 aa11.03□□□□□ -0.64
TRIM4-201ENST00000349062 GNG7O60262 68 aa11.03□□□□□ -0.64
TRIM4-201ENST00000349062 IGFL4Q6B9Z1 124 aa11.03□□□□□ -0.64
TRIM4-201ENST00000349062 OR1L4Q8NGR5 311 aa11.03□□□□□ -0.64
TRIM4-201ENST00000349062 TPPP3Q9BW30 176 aa11.03□□□□□ -0.64
TRIM4-201ENST00000349062 PRORYQ9H606 182 aa11.03□□□□□ -0.64
TRIM4-201ENST00000349062 OR2T8A6NH00 312 aa11.03□□□□□ -0.64
TRIM4-201ENST00000349062 TEX22C9J3V5 150 aa11.03□□□□□ -0.64
TRIM4-201ENST00000349062 C11orf71Q6IPW1 123 aa11.03□□□□□ -0.64
TRIM4-201ENST00000349062 C17orf77Q96MU5 243 aa11.03□□□□□ -0.64
TRIM4-201ENST00000349062 F11RQ9Y624 299 aaKnown RBP11.03□□□□□ -0.64
TRIM4-201ENST00000349062 NDPQ00604 133 aa11.02□□□□□ -0.64
TRIM4-201ENST00000349062 PMCHL1Q16048 86 aa11.02□□□□□ -0.64
TRIM4-201ENST00000349062 OR4A5Q8NH83 315 aa11.02□□□□□ -0.64
TRIM4-201ENST00000349062 FAM168AQ92567 244 aa11.02□□□□□ -0.64
TRIM4-201ENST00000349062 FAM167A-AS1Q96KT0 104 aa11.02□□□□□ -0.64
TRIM4-201ENST00000349062 PPP1R14DQ9NXH3 145 aa11.02□□□□□ -0.64
TRIM4-201ENST00000349062 ZNF207O43670 478 aaKnown RBP11.02□□□□□ -0.65
TRIM4-201ENST00000349062 NBEAP1P0C6P0 100 aa11.02□□□□□ -0.65
TRIM4-201ENST00000349062 MCRIP2Q9BUT9 160 aaKnown RBP11.02□□□□□ -0.65
TRIM4-201ENST00000349062 ARL2-SNX15V9GYD0 113 aa11.02□□□□□ -0.65
TRIM4-201ENST00000349062 ACANP16112 2415 aa11.02□□□□□ -0.65
TRIM4-201ENST00000349062 PRTN3P24158 256 aa11.02□□□□□ -0.65
TRIM4-201ENST00000349062 Q71RC1 249 aaPredicted RBP11.02□□□□□ -0.65
TRIM4-201ENST00000349062 M0R2Z0 102 aa11.01□□□□□ -0.65
TRIM4-201ENST00000349062 SAA4P35542 130 aa11.01□□□□□ -0.65
TRIM4-201ENST00000349062 GAGE1Q13065 139 aa11.01□□□□□ -0.65
TRIM4-201ENST00000349062 APCSP02743 223 aa11.01□□□□□ -0.65
TRIM4-201ENST00000349062 IGLC2P0DOY2 106 aa11.01□□□□□ -0.65
TRIM4-201ENST00000349062 IGLC3P0DOY3 106 aa11.01□□□□□ -0.65
TRIM4-201ENST00000349062 ZNF137PP52743 207 aa11.01□□□□□ -0.65
TRIM4-201ENST00000349062 ATP5J2P56134 94 aa11.01□□□□□ -0.65
TRIM4-201ENST00000349062 IBA57Q5T440 356 aaKnown RBP11.01□□□□□ -0.65
TRIM4-201ENST00000349062 VPS25Q9BRG1 176 aa11.01□□□□□ -0.65
TRIM4-201ENST00000349062 HIGD1AQ9Y241 93 aa11.01□□□□□ -0.65
TRIM4-201ENST00000349062 CORTO00230 105 aa11□□□□□ -0.65
TRIM4-201ENST00000349062 M0QZ24 198 aa11□□□□□ -0.65
TRIM4-201ENST00000349062 ZNF324O75467 553 aaPredicted RBP11□□□□□ -0.65
TRIM4-201ENST00000349062 NDUFB8O95169 186 aa11□□□□□ -0.65
TRIM4-201ENST00000349062 EFNA4P52798 201 aa11□□□□□ -0.65
TRIM4-201ENST00000349062 TCTAP57738 103 aa11□□□□□ -0.65
TRIM4-201ENST00000349062 SELENOTP62341 195 aa11□□□□□ -0.65
TRIM4-201ENST00000349062 TNFRSF14Q92956 283 aa11□□□□□ -0.65
TRIM4-201ENST00000349062 ABCA2Q9BZC7 2435 aa11□□□□□ -0.65
TRIM4-201ENST00000349062 MTORP42345 2549 aa11□□□□□ -0.65
TRIM4-201ENST00000349062 LINC01548A6NM66 108 aa11□□□□□ -0.65
TRIM4-201ENST00000349062 G3V318 75 aa11□□□□□ -0.65
TRIM4-201ENST00000349062 FOXA3P55318 350 aaPredicted RBP11□□□□□ -0.65
TRIM4-201ENST00000349062 C5orf64Q2M2E5 130 aa11□□□□□ -0.65
TRIM4-201ENST00000349062 KLHDC1Q8N7A1 406 aa11□□□□□ -0.65
TRIM4-201ENST00000349062 CLEC5AQ9NY25 188 aa11□□□□□ -0.65
TRIM4-201ENST00000349062 V9GYV3 84 aa11□□□□□ -0.65
TRIM4-201ENST00000349062 AMY1AP04745 511 aa10.99□□□□□ -0.65
TRIM4-201ENST00000349062 GOLT1AQ6ZVE7 132 aa10.99□□□□□ -0.65
TRIM4-201ENST00000349062 PRNTQ86SH4 94 aa10.99□□□□□ -0.65
TRIM4-201ENST00000349062 ARPC1AQ92747 370 aa10.99□□□□□ -0.65
TRIM4-201ENST00000349062 KCNS1Q96KK3 526 aa10.99□□□□□ -0.65
TRIM4-201ENST00000349062 PEX7O00628 323 aa10.99□□□□□ -0.65
TRIM4-201ENST00000349062 HOXB4P17483 251 aaPredicted RBP10.99□□□□□ -0.65
TRIM4-201ENST00000349062 COL8A1P27658 744 aa10.99□□□□□ -0.65
TRIM4-201ENST00000349062 FAM71F2Q6NXP2 309 aa10.99□□□□□ -0.65
TRIM4-201ENST00000349062 OR2D3Q8NGH3 330 aa10.99□□□□□ -0.65
TRIM4-201ENST00000349062 TRAV40A0A0B4J280 105 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms