RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 SP9P0CG40 484 aa12.2□□□□□ -0.46
PTBP1-201ENST00000349038 PATE2Q6UY27 113 aa12.2□□□□□ -0.46
PTBP1-201ENST00000349038 MOGAT3Q86VF5 341 aa12.2□□□□□ -0.46
PTBP1-201ENST00000349038 ZNF418Q8TF45 676 aaPredicted RBP12.2□□□□□ -0.46
PTBP1-201ENST00000349038 CALYQ9NYX4 217 aa12.2□□□□□ -0.46
PTBP1-201ENST00000349038 IQCF6A8MYZ5 107 aa12.2□□□□□ -0.46
PTBP1-201ENST00000349038 SAA1P0DJI8 122 aaPredicted RBP12.2□□□□□ -0.46
PTBP1-201ENST00000349038 ERHP84090 104 aaKnown RBP12.2□□□□□ -0.46
PTBP1-201ENST00000349038 SPRNQ5BIV9 151 aa12.2□□□□□ -0.46
PTBP1-201ENST00000349038 LINC01545Q5VT33 79 aa12.2□□□□□ -0.46
PTBP1-201ENST00000349038 TTC28Q96AY4 2481 aa12.2□□□□□ -0.46
PTBP1-201ENST00000349038 CD300EQ496F6 205 aaPredicted RBP12.2□□□□□ -0.46
PTBP1-201ENST00000349038 C11orf53Q8IXP5 236 aa12.2□□□□□ -0.46
PTBP1-201ENST00000349038 CRXO43186 299 aaPredicted RBP12.19□□□□□ -0.46
PTBP1-201ENST00000349038 GATA3P23771 443 aa12.19□□□□□ -0.46
PTBP1-201ENST00000349038 PRR7Q8TB68 274 aa12.19□□□□□ -0.46
PTBP1-201ENST00000349038 SPAG8Q99932 426 aaPredicted RBP12.19□□□□□ -0.46
PTBP1-201ENST00000349038 TMEM160Q9NX00 188 aa12.19□□□□□ -0.46
PTBP1-201ENST00000349038 FTH1P19P0C7X4 201 aa12.19□□□□□ -0.46
PTBP1-201ENST00000349038 EVI2AP22794 236 aa12.19□□□□□ -0.46
PTBP1-201ENST00000349038 RUSC1-AS1Q66K80 236 aa12.19□□□□□ -0.46
PTBP1-201ENST00000349038 WIPF2Q8TF74 440 aaPredicted RBP12.19□□□□□ -0.46
PTBP1-201ENST00000349038 Q9H3A6 140 aa12.19□□□□□ -0.46
PTBP1-201ENST00000349038 A0A1B0GXF2 115 aa12.18□□□□□ -0.46
PTBP1-201ENST00000349038 PATE3B3GLJ2 98 aa12.18□□□□□ -0.46
PTBP1-201ENST00000349038 C15orf65H3BRN8 121 aa12.18□□□□□ -0.46
PTBP1-201ENST00000349038 CD69Q07108 199 aa12.18□□□□□ -0.46
PTBP1-201ENST00000349038 C6orf15Q6UXA7 325 aaPredicted RBP12.18□□□□□ -0.46
PTBP1-201ENST00000349038 OR5A1Q8NGJ0 315 aa12.18□□□□□ -0.46
PTBP1-201ENST00000349038 IGKV2D-26A0A0A0MRZ7 120 aa12.18□□□□□ -0.46
PTBP1-201ENST00000349038 A0A1B0GUT8 65 aa12.18□□□□□ -0.46
PTBP1-201ENST00000349038 PSMB11A5LHX3 300 aa12.18□□□□□ -0.46
PTBP1-201ENST00000349038 TNFSF15O95150 251 aa12.18□□□□□ -0.46
PTBP1-201ENST00000349038 LAMA5O15230 3695 aa12.18□□□□□ -0.46
PTBP1-201ENST00000349038 DLX1P56177 255 aa12.18□□□□□ -0.46
PTBP1-201ENST00000349038 SVIPQ8NHG7 77 aa12.17□□□□□ -0.46
PTBP1-201ENST00000349038 FXYD5Q96DB9 178 aa12.17□□□□□ -0.46
PTBP1-201ENST00000349038 PTPRBP23467 1997 aa12.17□□□□□ -0.46
PTBP1-201ENST00000349038 PIEZO2Q9H5I5 2752 aa12.17□□□□□ -0.46
PTBP1-201ENST00000349038 LOC107984156A0A0G2JMH3 177 aa12.17□□□□□ -0.46
PTBP1-201ENST00000349038 ARL17AQ8IVW1 177 aa12.17□□□□□ -0.46
PTBP1-201ENST00000349038 VGLL1Q99990 258 aa12.17□□□□□ -0.46
PTBP1-201ENST00000349038 TMEM14BQ9NUH8 114 aa12.17□□□□□ -0.46
PTBP1-201ENST00000349038 RPUSD1Q9UJJ7 312 aaKnown RBP12.17□□□□□ -0.46
PTBP1-201ENST00000349038 TECTAO75443 2155 aa12.17□□□□□ -0.46
PTBP1-201ENST00000349038 IGKV1D-17A0A075B6S4 117 aa12.16□□□□□ -0.46
PTBP1-201ENST00000349038 M0R3E3 92 aa12.16□□□□□ -0.46
PTBP1-201ENST00000349038 RNASE2P10153 161 aaKnown RBP12.16□□□□□ -0.46
PTBP1-201ENST00000349038 RASL11AQ6T310 242 aa12.16□□□□□ -0.46
PTBP1-201ENST00000349038 FAM222BQ8WU58 562 aa12.16□□□□□ -0.46
PTBP1-201ENST00000349038 GLMPQ8WWB7 406 aa12.16□□□□□ -0.46
PTBP1-201ENST00000349038 ZNF479Q96JC4 524 aa12.16□□□□□ -0.46
PTBP1-201ENST00000349038 PRELID3AQ96N28 172 aa12.16□□□□□ -0.46
PTBP1-201ENST00000349038 H3BVH4 76 aa12.16□□□□□ -0.46
PTBP1-201ENST00000349038 CT45A6P0DMU7 189 aa12.16□□□□□ -0.46
PTBP1-201ENST00000349038 CT45A5P0DMU8 189 aa12.16□□□□□ -0.46
PTBP1-201ENST00000349038 CT45A7P0DMV0 189 aa12.16□□□□□ -0.46
PTBP1-201ENST00000349038 MC5RP33032 325 aa12.16□□□□□ -0.46
PTBP1-201ENST00000349038 C3orf36Q3SXR2 165 aa12.16□□□□□ -0.46
PTBP1-201ENST00000349038 PPP1R35Q8TAP8 253 aa12.16□□□□□ -0.46
PTBP1-201ENST00000349038 IFI27L1Q96BM0 104 aa12.16□□□□□ -0.46
PTBP1-201ENST00000349038 C17orf77Q96MU5 243 aa12.16□□□□□ -0.46
PTBP1-201ENST00000349038 CCL13Q99616 98 aa12.16□□□□□ -0.46
PTBP1-201ENST00000349038 KLK15Q9H2R5 256 aa12.16□□□□□ -0.46
PTBP1-201ENST00000349038 PRNDQ9UKY0 176 aa12.16□□□□□ -0.46
PTBP1-201ENST00000349038 IGHV3OR16-8A0A075B7F1 116 aa12.16□□□□□ -0.46
PTBP1-201ENST00000349038 RBP4P02753 201 aa12.16□□□□□ -0.46
PTBP1-201ENST00000349038 FGF6P10767 208 aa12.16□□□□□ -0.46
PTBP1-201ENST00000349038 TNFRSF1AP19438 455 aa12.16□□□□□ -0.46
PTBP1-201ENST00000349038 ATP5L2Q7Z4Y8 100 aa12.16□□□□□ -0.46
PTBP1-201ENST00000349038 SIGLEC8Q9NYZ4 499 aa12.16□□□□□ -0.46
PTBP1-201ENST00000349038 CKS2P33552 79 aa12.15□□□□□ -0.46
PTBP1-201ENST00000349038 SYT8Q8NBV8 401 aa12.15□□□□□ -0.46
PTBP1-201ENST00000349038 PTH2Q96A98 100 aa12.15□□□□□ -0.46
PTBP1-201ENST00000349038 CXXC4Q9H2H0 198 aa12.15□□□□□ -0.46
PTBP1-201ENST00000349038 DIAPH2-AS1Q14236 149 aa12.15□□□□□ -0.46
PTBP1-201ENST00000349038 CUL9Q8IWT3 2517 aa12.15□□□□□ -0.47
PTBP1-201ENST00000349038 SPINK8P0C7L1 97 aa12.14□□□□□ -0.47
PTBP1-201ENST00000349038 FAM231DQ6ZW35 169 aa12.14□□□□□ -0.47
PTBP1-201ENST00000349038 FAM216BQ8N7L0 139 aa12.14□□□□□ -0.47
PTBP1-201ENST00000349038 SIT1Q9Y3P8 196 aa12.14□□□□□ -0.47
PTBP1-201ENST00000349038 TCRAP04437 139 aa12.14□□□□□ -0.47
PTBP1-201ENST00000349038 PRCDQ00LT1 54 aa12.14□□□□□ -0.47
PTBP1-201ENST00000349038 HIST1H4GQ99525 98 aa12.14□□□□□ -0.47
PTBP1-201ENST00000349038 CHAC1Q9BUX1 264 aa12.14□□□□□ -0.47
PTBP1-201ENST00000349038 SPTAN1Q13813 2472 aaKnown RBP12.14□□□□□ -0.47
PTBP1-201ENST00000349038 TRGV8A0A0C4DH27 118 aa12.14□□□□□ -0.47
PTBP1-201ENST00000349038 ZCCHC24Q8N2G6 241 aaKnown RBP12.14□□□□□ -0.47
PTBP1-201ENST00000349038 FOXC2Q99958 501 aa12.14□□□□□ -0.47
PTBP1-201ENST00000349038 JPT1Q9UK76 154 aa12.14□□□□□ -0.47
PTBP1-201ENST00000349038 NPIPB6E9PJ23 425 aa12.13□□□□□ -0.47
PTBP1-201ENST00000349038 KIR2DL2P43627 348 aaPredicted RBP12.13□□□□□ -0.47
PTBP1-201ENST00000349038 TWIST1Q15672 202 aa12.13□□□□□ -0.47
PTBP1-201ENST00000349038 FAM90A1Q86YD7 464 aa12.13□□□□□ -0.47
PTBP1-201ENST00000349038 BOD1L2Q8IYS8 172 aa12.13□□□□□ -0.47
PTBP1-201ENST00000349038 FOXA2Q9Y261 457 aaPredicted RBP12.13□□□□□ -0.47
PTBP1-201ENST00000349038 COL27A1Q8IZC6 1860 aaPredicted RBP12.13□□□□□ -0.47
PTBP1-201ENST00000349038 UPK2O00526 184 aa12.13□□□□□ -0.47
PTBP1-201ENST00000349038 CNIH1O95406 144 aa12.13□□□□□ -0.47
PTBP1-201ENST00000349038 LOXL3P58215 753 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms