RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 AJUBAQ96IF1 538 aa13.45□□□□□ -0.26
SMARCC2-202ENST00000347471 TRBV24-1A0A075B6N3 115 aa13.45□□□□□ -0.26
SMARCC2-202ENST00000347471 A0A1B0GUS0 222 aa13.45□□□□□ -0.26
SMARCC2-202ENST00000347471 C5orf52A6NGY3 159 aa13.45□□□□□ -0.26
SMARCC2-202ENST00000347471 HLA-DRB1P01911 266 aa13.45□□□□□ -0.26
SMARCC2-202ENST00000347471 RPEL1Q2QD12 228 aa13.45□□□□□ -0.26
SMARCC2-202ENST00000347471 MOB4Q9Y3A3 225 aa13.45□□□□□ -0.26
SMARCC2-202ENST00000347471 NOTCH3Q9UM47 2321 aa13.44□□□□□ -0.26
SMARCC2-202ENST00000347471 GRIFINA4D1Z8 144 aa13.44□□□□□ -0.26
SMARCC2-202ENST00000347471 TPPP2P59282 170 aa13.44□□□□□ -0.26
SMARCC2-202ENST00000347471 XKRY2A2RUG3 117 aa13.44□□□□□ -0.26
SMARCC2-202ENST00000347471 NPIPB5A8MRT5 1133 aa13.44□□□□□ -0.26
SMARCC2-202ENST00000347471 Q6ZS46 218 aa13.44□□□□□ -0.26
SMARCC2-202ENST00000347471 TTC9CQ8N5M4 171 aa13.44□□□□□ -0.26
SMARCC2-202ENST00000347471 C11orf52Q96A22 123 aa13.44□□□□□ -0.26
SMARCC2-202ENST00000347471 ZFHX3Q15911 3703 aa13.44□□□□□ -0.26
SMARCC2-202ENST00000347471 ZNF785A8K8V0 405 aa13.44□□□□□ -0.26
SMARCC2-202ENST00000347471 SCGB2A1O75556 95 aa13.44□□□□□ -0.26
SMARCC2-202ENST00000347471 GP9P14770 177 aa13.44□□□□□ -0.26
SMARCC2-202ENST00000347471 CAMPP49913 170 aa13.44□□□□□ -0.26
SMARCC2-202ENST00000347471 RPL11P62913 178 aaKnown RBP13.44□□□□□ -0.26
SMARCC2-202ENST00000347471 OR10D4PQ8NGN7 298 aa13.44□□□□□ -0.26
SMARCC2-202ENST00000347471 DAZAP1Q96EP5 407 aaKnown RBP13.44□□□□□ -0.26
SMARCC2-202ENST00000347471 SRD5A3Q9H8P0 318 aa13.44□□□□□ -0.26
SMARCC2-202ENST00000347471 WNK1Q9H4A3 2382 aa13.43□□□□□ -0.26
SMARCC2-202ENST00000347471 TRAV41A0A0B4J266 112 aa13.43□□□□□ -0.26
SMARCC2-202ENST00000347471 GATCO43716 136 aaKnown RBP13.43□□□□□ -0.26
SMARCC2-202ENST00000347471 PVRIGQ6DKI7 326 aa13.43□□□□□ -0.26
SMARCC2-202ENST00000347471 Q71RC1 249 aaPredicted RBP13.43□□□□□ -0.26
SMARCC2-202ENST00000347471 HIST1H1EP10412 219 aaKnown RBP13.43□□□□□ -0.26
SMARCC2-202ENST00000347471 SRP14P37108 136 aaKnown RBP13.43□□□□□ -0.26
SMARCC2-202ENST00000347471 C5orf56Q8N8D9 126 aa13.43□□□□□ -0.26
SMARCC2-202ENST00000347471 SRSF8Q9BRL6 282 aaKnown RBP13.43□□□□□ -0.26
SMARCC2-202ENST00000347471 SNURFLB1AK76 121 aa13.42□□□□□ -0.26
SMARCC2-202ENST00000347471 TOMM40O96008 361 aa13.42□□□□□ -0.26
SMARCC2-202ENST00000347471 EBI3Q14213 229 aa13.42□□□□□ -0.26
SMARCC2-202ENST00000347471 CIARTQ8N365 385 aaPredicted RBP13.42□□□□□ -0.26
SMARCC2-202ENST00000347471 TMSB15BA0A087X1C1 80 aa13.42□□□□□ -0.26
SMARCC2-202ENST00000347471 CTSGP08311 255 aa13.42□□□□□ -0.26
SMARCC2-202ENST00000347471 Q5PR19 223 aa13.42□□□□□ -0.26
SMARCC2-202ENST00000347471 C5orf17Q8NAS9 161 aa13.42□□□□□ -0.26
SMARCC2-202ENST00000347471 TRAV30A0A087WSZ9 112 aa13.42□□□□□ -0.26
SMARCC2-202ENST00000347471 ADMP35318 185 aa13.42□□□□□ -0.26
SMARCC2-202ENST00000347471 IL17RELQ6ZVW7 336 aa13.42□□□□□ -0.26
SMARCC2-202ENST00000347471 SHANK2-AS3Q9BTD1 123 aa13.42□□□□□ -0.26
SMARCC2-202ENST00000347471 NAT8BQ9UHF3 227 aa13.42□□□□□ -0.26
SMARCC2-202ENST00000347471 C9JCJ5 164 aa13.41□□□□□ -0.26
SMARCC2-202ENST00000347471 IGHV4-59P01825 116 aa13.41□□□□□ -0.26
SMARCC2-202ENST00000347471 RABAC1Q9UI14 185 aa13.41□□□□□ -0.26
SMARCC2-202ENST00000347471 TEX15Q9BXT5 2789 aa13.41□□□□□ -0.26
SMARCC2-202ENST00000347471 TMEM68Q96MH6 324 aa13.41□□□□□ -0.26
SMARCC2-202ENST00000347471 NIT2Q9NQR4 276 aa13.41□□□□□ -0.26
SMARCC2-202ENST00000347471 IL36BQ9NZH7 164 aa13.41□□□□□ -0.26
SMARCC2-202ENST00000347471 TCRAP04437 139 aa13.41□□□□□ -0.26
SMARCC2-202ENST00000347471 HLA-DMBP28068 263 aa13.41□□□□□ -0.26
SMARCC2-202ENST00000347471 AAMDCQ9H7C9 122 aa13.41□□□□□ -0.26
SMARCC2-202ENST00000347471 ATP5G2Q06055 141 aa13.4□□□□□ -0.26
SMARCC2-202ENST00000347471 LINC00518Q8N0U6 118 aa13.4□□□□□ -0.26
SMARCC2-202ENST00000347471 CDC42EP3Q9UKI2 254 aa13.4□□□□□ -0.26
SMARCC2-202ENST00000347471 GZMBP10144 247 aa13.4□□□□□ -0.26
SMARCC2-202ENST00000347471 FAM110DQ8TAY7 271 aaPredicted RBP13.4□□□□□ -0.26
SMARCC2-202ENST00000347471 Q96MF0 132 aa13.4□□□□□ -0.26
SMARCC2-202ENST00000347471 SORL1Q92673 2214 aa13.4□□□□□ -0.26
SMARCC2-202ENST00000347471 DEFB112Q30KQ8 113 aa13.4□□□□□ -0.26
SMARCC2-202ENST00000347471 MRPL27Q9P0M9 148 aaKnown RBP13.4□□□□□ -0.26
SMARCC2-202ENST00000347471 VWC2LB2RUY7 222 aa13.39□□□□□ -0.27
SMARCC2-202ENST00000347471 TOMM20LQ6UXN7 152 aa13.39□□□□□ -0.27
SMARCC2-202ENST00000347471 ATG101Q9BSB4 218 aa13.39□□□□□ -0.27
SMARCC2-202ENST00000347471 TCF24Q7RTU0 167 aa13.39□□□□□ -0.27
SMARCC2-202ENST00000347471 GAR1Q9NY12 217 aaKnown RBP13.39□□□□□ -0.27
SMARCC2-202ENST00000347471 V9GYV3 84 aa13.39□□□□□ -0.27
SMARCC2-202ENST00000347471 F8W735 103 aaPredicted RBP13.39□□□□□ -0.27
SMARCC2-202ENST00000347471 BMPR1BO00238 502 aa13.39□□□□□ -0.27
SMARCC2-202ENST00000347471 GGCTO75223 188 aaKnown RBP13.39□□□□□ -0.27
SMARCC2-202ENST00000347471 NUDT10Q8NFP7 164 aa13.39□□□□□ -0.27
SMARCC2-202ENST00000347471 NUDT11Q96G61 164 aa13.39□□□□□ -0.27
SMARCC2-202ENST00000347471 GOSR1O95249 250 aa13.38□□□□□ -0.27
SMARCC2-202ENST00000347471 MEOX2P50222 304 aa13.38□□□□□ -0.27
SMARCC2-202ENST00000347471 LINC01356Q8N9X3 169 aa13.38□□□□□ -0.27
SMARCC2-202ENST00000347471 KLK15Q9H2R5 256 aa13.38□□□□□ -0.27
SMARCC2-202ENST00000347471 FLNAP21333 2647 aaKnown RBP13.38□□□□□ -0.27
SMARCC2-202ENST00000347471 IGKV2-40A0A087WW87 121 aaPredicted RBP13.38□□□□□ -0.27
SMARCC2-202ENST00000347471 H3BRN7 92 aa13.38□□□□□ -0.27
SMARCC2-202ENST00000347471 IGKV2D-40P01614 121 aaPredicted RBP13.38□□□□□ -0.27
SMARCC2-202ENST00000347471 PIFOQ8TCI5 191 aa13.38□□□□□ -0.27
SMARCC2-202ENST00000347471 EEF1AKMT3Q96AZ1 226 aa13.38□□□□□ -0.27
SMARCC2-202ENST00000347471 BTF3L4Q96K17 158 aa13.38□□□□□ -0.27
SMARCC2-202ENST00000347471 ZNF705FA8MVS1 300 aaPredicted RBP13.38□□□□□ -0.27
SMARCC2-202ENST00000347471 IGLV2-8P01709 118 aa13.38□□□□□ -0.27
SMARCC2-202ENST00000347471 MUC21A0A0G2JKD1 596 aa13.37□□□□□ -0.27
SMARCC2-202ENST00000347471 MUC21A0A140T8X8 626 aa13.37□□□□□ -0.27
SMARCC2-202ENST00000347471 J3KRW8 73 aa13.37□□□□□ -0.27
SMARCC2-202ENST00000347471 TRBV12-3P01733 135 aa13.37□□□□□ -0.27
SMARCC2-202ENST00000347471 CSN1S1P47710 185 aa13.37□□□□□ -0.27
SMARCC2-202ENST00000347471 MUC21Q5SSG8 566 aa13.37□□□□□ -0.27
SMARCC2-202ENST00000347471 Q8TAT8 98 aa13.37□□□□□ -0.27
SMARCC2-202ENST00000347471 GPR82Q96P67 336 aa13.37□□□□□ -0.27
SMARCC2-202ENST00000347471 UBE2CO00762 179 aa13.37□□□□□ -0.27
SMARCC2-202ENST00000347471 CD99P14209 185 aa13.37□□□□□ -0.27
SMARCC2-202ENST00000347471 SLC25A16P16260 332 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms