RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 ETFRF1Q6IPR1 90 aa12.16□□□□□ -0.46
RAB5C-201ENST00000346213 UNQ9165/PRO28630Q6UXU0 137 aa12.16□□□□□ -0.46
RAB5C-201ENST00000346213 STPG3Q8N7X2 389 aa12.16□□□□□ -0.46
RAB5C-201ENST00000346213 OR1P1Q8NH06 330 aa12.16□□□□□ -0.46
RAB5C-201ENST00000346213 ZNF502Q8TBZ5 544 aa12.16□□□□□ -0.46
RAB5C-201ENST00000346213 RXFP4Q8TDU9 374 aa12.16□□□□□ -0.46
RAB5C-201ENST00000346213 A0A1W2PPV4 95 aa12.15□□□□□ -0.46
RAB5C-201ENST00000346213 CORTO00230 105 aa12.15□□□□□ -0.46
RAB5C-201ENST00000346213 TAGLN2P37802 199 aaKnown RBP12.15□□□□□ -0.46
RAB5C-201ENST00000346213 VAX2Q9UIW0 290 aa12.15□□□□□ -0.46
RAB5C-201ENST00000346213 F11RQ9Y624 299 aaKnown RBP12.15□□□□□ -0.46
RAB5C-201ENST00000346213 STAB2Q8WWQ8 2551 aa12.14□□□□□ -0.47
RAB5C-201ENST00000346213 IGHV3-35A0A0C4DH35 117 aa12.14□□□□□ -0.47
RAB5C-201ENST00000346213 ZFP92A6NM28 416 aa12.14□□□□□ -0.47
RAB5C-201ENST00000346213 K7EIM0 57 aa12.14□□□□□ -0.47
RAB5C-201ENST00000346213 NDUFS6O75380 124 aaKnown RBP12.14□□□□□ -0.47
RAB5C-201ENST00000346213 OR10J1P30954 320 aa12.14□□□□□ -0.47
RAB5C-201ENST00000346213 ZNF600Q6ZNG1 722 aa12.14□□□□□ -0.47
RAB5C-201ENST00000346213 SBSPONQ8IVN8 264 aa12.14□□□□□ -0.47
RAB5C-201ENST00000346213 THAP8Q8NA92 274 aa12.14□□□□□ -0.47
RAB5C-201ENST00000346213 MLXQ9UH92 298 aa12.14□□□□□ -0.47
RAB5C-201ENST00000346213 TMEM213A2RRL7 107 aa12.13□□□□□ -0.47
RAB5C-201ENST00000346213 HMGB3O15347 200 aaKnown RBP12.13□□□□□ -0.47
RAB5C-201ENST00000346213 EIF3GO75821 320 aaKnown RBP eCLIP12.13□□□□□ -0.47
RAB5C-201ENST00000346213 S100A8P05109 93 aa12.13□□□□□ -0.47
RAB5C-201ENST00000346213 SMIM6P0DI80 62 aa12.13□□□□□ -0.47
RAB5C-201ENST00000346213 SOHLH1Q5JUK2 328 aa12.13□□□□□ -0.47
RAB5C-201ENST00000346213 DNAH7Q8WXX0 4024 aa12.13□□□□□ -0.47
RAB5C-201ENST00000346213 STAG3L2P0CL84 134 aa12.13□□□□□ -0.47
RAB5C-201ENST00000346213 STAG3L3P0CL85 134 aa12.13□□□□□ -0.47
RAB5C-201ENST00000346213 DEFA4P12838 97 aa12.13□□□□□ -0.47
RAB5C-201ENST00000346213 GPR183P32249 361 aa12.13□□□□□ -0.47
RAB5C-201ENST00000346213 ARL3P36405 182 aa12.13□□□□□ -0.47
RAB5C-201ENST00000346213 PSMB3P49720 205 aa12.13□□□□□ -0.47
RAB5C-201ENST00000346213 SSTP61278 116 aa12.13□□□□□ -0.47
RAB5C-201ENST00000346213 RHOBP62745 196 aa12.13□□□□□ -0.47
RAB5C-201ENST00000346213 CYP2G1PQ6ZSU1 146 aa12.13□□□□□ -0.47
RAB5C-201ENST00000346213 ACY3Q96HD9 319 aa12.13□□□□□ -0.47
RAB5C-201ENST00000346213 TMPRSS5Q9H3S3 457 aa12.13□□□□□ -0.47
RAB5C-201ENST00000346213 MANBALQ9NQG1 85 aa12.13□□□□□ -0.47
RAB5C-201ENST00000346213 C2orf70A6NJV1 201 aa12.12□□□□□ -0.47
RAB5C-201ENST00000346213 CLEC3BP05452 202 aa12.12□□□□□ -0.47
RAB5C-201ENST00000346213 FRMD6-AS1P0C7T7 363 aa12.12□□□□□ -0.47
RAB5C-201ENST00000346213 NPBWR1P48145 328 aa12.12□□□□□ -0.47
RAB5C-201ENST00000346213 CD300EQ496F6 205 aaPredicted RBP12.12□□□□□ -0.47
RAB5C-201ENST00000346213 NPIPB3Q92617 1050 aa12.12□□□□□ -0.47
RAB5C-201ENST00000346213 MISP3Q96FF7 219 aa12.12□□□□□ -0.47
RAB5C-201ENST00000346213 CHRDL1Q9BU40 450 aa12.12□□□□□ -0.47
RAB5C-201ENST00000346213 WFDC10AQ9H1F0 79 aa12.12□□□□□ -0.47
RAB5C-201ENST00000346213 SIGLEC8Q9NYZ4 499 aa12.12□□□□□ -0.47
RAB5C-201ENST00000346213 SORL1Q92673 2214 aa12.11□□□□□ -0.47
RAB5C-201ENST00000346213 GGCTO75223 188 aaKnown RBP12.11□□□□□ -0.47
RAB5C-201ENST00000346213 IGHV3-48P01763 117 aa12.11□□□□□ -0.47
RAB5C-201ENST00000346213 ADMP35318 185 aa12.11□□□□□ -0.47
RAB5C-201ENST00000346213 OR1L6Q8NGR2 347 aa12.11□□□□□ -0.47
RAB5C-201ENST00000346213 EEF1AKMT3Q96AZ1 226 aa12.11□□□□□ -0.47
RAB5C-201ENST00000346213 TCEAL7Q9BRU2 100 aa12.11□□□□□ -0.47
RAB5C-201ENST00000346213 ELOVL1Q9BW60 279 aa12.11□□□□□ -0.47
RAB5C-201ENST00000346213 SMAD5-AS1Q9Y6J3 95 aa12.11□□□□□ -0.47
RAB5C-201ENST00000346213 IGKV1D-37A0A075B6S9 117 aa12.1□□□□□ -0.47
RAB5C-201ENST00000346213 ZNF785A8K8V0 405 aa12.1□□□□□ -0.47
RAB5C-201ENST00000346213 CXorf1O96002 111 aa12.1□□□□□ -0.47
RAB5C-201ENST00000346213 AKR1D1P51857 326 aa12.1□□□□□ -0.47
RAB5C-201ENST00000346213 SELENOTP62341 195 aa12.1□□□□□ -0.47
RAB5C-201ENST00000346213 TM4SF20Q53R12 229 aa12.1□□□□□ -0.47
RAB5C-201ENST00000346213 CYB561D1Q8N8Q1 229 aa12.1□□□□□ -0.47
RAB5C-201ENST00000346213 TMEM116Q8NCL8 245 aa12.1□□□□□ -0.47
RAB5C-201ENST00000346213 MRPL36Q9P0J6 103 aaKnown RBP12.1□□□□□ -0.47
RAB5C-201ENST00000346213 IGHV3OR16-8A0A075B7F1 116 aa12.1□□□□□ -0.47
RAB5C-201ENST00000346213 IGHV4-30-4P0DP06 118 aa12.1□□□□□ -0.47
RAB5C-201ENST00000346213 FOLR2P14207 255 aa12.1□□□□□ -0.47
RAB5C-201ENST00000346213 HIST1H1BP16401 226 aaKnown RBP12.1□□□□□ -0.47
RAB5C-201ENST00000346213 RND2P52198 227 aa12.1□□□□□ -0.47
RAB5C-201ENST00000346213 MEF2BQ02080 365 aaPredicted RBP12.1□□□□□ -0.47
RAB5C-201ENST00000346213 SEPSECSQ9HD40 501 aaKnown RBP12.1□□□□□ -0.47
RAB5C-201ENST00000346213 OR2T8A6NH00 312 aa12.09□□□□□ -0.47
RAB5C-201ENST00000346213 FAM74A7A6NL05 159 aa12.09□□□□□ -0.47
RAB5C-201ENST00000346213 I3L2K1 104 aa12.09□□□□□ -0.47
RAB5C-201ENST00000346213 LGALS9O00182 355 aa12.09□□□□□ -0.47
RAB5C-201ENST00000346213 MT-CO2P00403 227 aa12.09□□□□□ -0.47
RAB5C-201ENST00000346213 S100A9P06702 114 aaKnown RBP12.09□□□□□ -0.47
RAB5C-201ENST00000346213 OR5G3P0C626 314 aa12.09□□□□□ -0.47
RAB5C-201ENST00000346213 GATA2P23769 480 aaPredicted RBP12.09□□□□□ -0.47
RAB5C-201ENST00000346213 RPL35P42766 123 aaKnown RBP12.09□□□□□ -0.47
RAB5C-201ENST00000346213 CD81P60033 236 aa12.09□□□□□ -0.47
RAB5C-201ENST00000346213 DEFB114Q30KQ6 69 aa12.09□□□□□ -0.47
RAB5C-201ENST00000346213 FAM74A3Q4VXF1 159 aa12.09□□□□□ -0.47
RAB5C-201ENST00000346213 FAM90A2PQ658T7 463 aa12.09□□□□□ -0.47
RAB5C-201ENST00000346213 GPHB5Q86YW7 130 aa12.09□□□□□ -0.47
RAB5C-201ENST00000346213 RNF2Q99496 336 aa12.09□□□□□ -0.47
RAB5C-201ENST00000346213 TRGV9Q99603 122 aa12.09□□□□□ -0.47
RAB5C-201ENST00000346213 C19orf73Q9NVV2 129 aa12.09□□□□□ -0.47
RAB5C-201ENST00000346213 FUT9Q9Y231 359 aa12.09□□□□□ -0.47
RAB5C-201ENST00000346213 A8MWP6 167 aa12.08□□□□□ -0.48
RAB5C-201ENST00000346213 CD7P09564 240 aa12.08□□□□□ -0.48
RAB5C-201ENST00000346213 ARL14EPLP0DKL9 152 aa12.08□□□□□ -0.48
RAB5C-201ENST00000346213 FAM78BQ5VT40 261 aa12.08□□□□□ -0.48
RAB5C-201ENST00000346213 SPATA31B1PQ5VZV4 182 aa12.08□□□□□ -0.48
RAB5C-201ENST00000346213 GATAD1Q8WUU5 269 aa12.08□□□□□ -0.48
RAB5C-201ENST00000346213 TRBV7-1A0A0A6YYK4 115 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms