RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 PSG3Q16557 428 aa16.08■□□□□ 0.16
HDAC4-201ENST00000345617 SHISA3A0PJX4 238 aa16.08■□□□□ 0.16
HDAC4-201ENST00000345617 NDUFC2O95298 119 aa16.08■□□□□ 0.16
HDAC4-201ENST00000345617 PYY3Q5JQD4 70 aa16.08■□□□□ 0.16
HDAC4-201ENST00000345617 ERCC8Q13216 396 aa16.07■□□□□ 0.16
HDAC4-201ENST00000345617 H3BQ85 93 aa16.07■□□□□ 0.16
HDAC4-201ENST00000345617 RNF5Q99942 180 aa16.07■□□□□ 0.16
HDAC4-201ENST00000345617 PCNX3Q9H6A9 2034 aa16.07■□□□□ 0.16
HDAC4-201ENST00000345617 C9orf118A6NHY6 69 aa16.07■□□□□ 0.16
HDAC4-201ENST00000345617 BSPH1Q075Z2 132 aa16.07■□□□□ 0.16
HDAC4-201ENST00000345617 PCOLCEQ15113 449 aa16.07■□□□□ 0.16
HDAC4-201ENST00000345617 TRBV7-1A0A0A6YYK4 115 aa16.07■□□□□ 0.16
HDAC4-201ENST00000345617 GREM1O60565 184 aa16.07■□□□□ 0.16
HDAC4-201ENST00000345617 CECR9P0C854 216 aa16.07■□□□□ 0.16
HDAC4-201ENST00000345617 WDR83OSQ9Y284 106 aa16.07■□□□□ 0.16
HDAC4-201ENST00000345617 LYL1P12980 280 aa16.06■□□□□ 0.16
HDAC4-201ENST00000345617 IGHV1-24A0A0C4DH33 117 aa16.06■□□□□ 0.16
HDAC4-201ENST00000345617 TRGV4A0A0C4DH28 118 aa16.06■□□□□ 0.16
HDAC4-201ENST00000345617 C1QTNF4Q9BXJ3 329 aa16.06■□□□□ 0.16
HDAC4-201ENST00000345617 TMEM141Q96I45 108 aa16.05■□□□□ 0.16
HDAC4-201ENST00000345617 CRIM1Q9NZV1 1036 aa16.05■□□□□ 0.16
HDAC4-201ENST00000345617 MRPL14Q6P1L8 145 aaKnown RBP16.05■□□□□ 0.16
HDAC4-201ENST00000345617 OR11H6Q8NGC7 330 aa16.05■□□□□ 0.16
HDAC4-201ENST00000345617 IGKV3D-20A0A0C4DH25 116 aa16.05■□□□□ 0.16
HDAC4-201ENST00000345617 IL17RELQ6ZVW7 336 aa16.05■□□□□ 0.16
HDAC4-201ENST00000345617 C1QCP02747 245 aa16.04■□□□□ 0.16
HDAC4-201ENST00000345617 PAX8Q06710 450 aa16.04■□□□□ 0.16
HDAC4-201ENST00000345617 IGHV3-66A0A0C4DH42 116 aa16.04■□□□□ 0.16
HDAC4-201ENST00000345617 IGHV3OR16-13A0A075B7E8 117 aa16.04■□□□□ 0.16
HDAC4-201ENST00000345617 IGHV3-74A0A0B4J1X5 117 aa16.04■□□□□ 0.16
HDAC4-201ENST00000345617 CHCHD5Q9BSY4 110 aa16.04■□□□□ 0.16
HDAC4-201ENST00000345617 ACYP1P07311 99 aa16.04■□□□□ 0.16
HDAC4-201ENST00000345617 CELA2AP08217 269 aa16.04■□□□□ 0.16
HDAC4-201ENST00000345617 FAM168AQ92567 244 aa16.04■□□□□ 0.16
HDAC4-201ENST00000345617 VDAC2P45880 294 aaPredicted RBP16.04■□□□□ 0.16
HDAC4-201ENST00000345617 ZNF138P52744 262 aa16.04■□□□□ 0.16
HDAC4-201ENST00000345617 OOSP1A8MZH6 123 aa16.03■□□□□ 0.16
HDAC4-201ENST00000345617 LILRA1O75019 489 aa16.03■□□□□ 0.16
HDAC4-201ENST00000345617 PYYP10082 97 aa16.03■□□□□ 0.16
HDAC4-201ENST00000345617 RPL36AP83881 106 aaKnown RBP16.03■□□□□ 0.16
HDAC4-201ENST00000345617 RPL36ALQ969Q0 106 aaKnown RBP16.03■□□□□ 0.16
HDAC4-201ENST00000345617 C9JAW5 83 aa16.03■□□□□ 0.16
HDAC4-201ENST00000345617 C3orf79P0CE67 100 aa16.03■□□□□ 0.16
HDAC4-201ENST00000345617 IL9P15248 144 aa16.03■□□□□ 0.16
HDAC4-201ENST00000345617 LY6G5BQ8NDX9 201 aa16.03■□□□□ 0.16
HDAC4-201ENST00000345617 DEPPQ9NTK1 212 aa16.03■□□□□ 0.16
HDAC4-201ENST00000345617 EXPH5Q8NEV8 1989 aa16.03■□□□□ 0.16
HDAC4-201ENST00000345617 MBNL3Q9NUK0 354 aaKnown RBP16.03■□□□□ 0.16
HDAC4-201ENST00000345617 K7EMI3 77 aa16.02■□□□□ 0.16
HDAC4-201ENST00000345617 TANC1Q9C0D5 1861 aa16.02■□□□□ 0.16
HDAC4-201ENST00000345617 IGLV3-32A0A0A0MS00 114 aa16.02■□□□□ 0.16
HDAC4-201ENST00000345617 IGHV3-49A0A0A0MS15 119 aa16.02■□□□□ 0.16
HDAC4-201ENST00000345617 IGHV3-35A0A0C4DH35 117 aa16.02■□□□□ 0.16
HDAC4-201ENST00000345617 LHFPL1Q86WI0 220 aa16.02■□□□□ 0.16
HDAC4-201ENST00000345617 TMEM75Q8N9X5 138 aa16.02■□□□□ 0.16
HDAC4-201ENST00000345617 CD55P08174 381 aa16.02■□□□□ 0.15
HDAC4-201ENST00000345617 C4orf51C9J302 202 aa16.02■□□□□ 0.15
HDAC4-201ENST00000345617 TMEM14EPQ6UXP3 125 aa16.02■□□□□ 0.15
HDAC4-201ENST00000345617 ZNF664Q8N3J9 261 aa16.02■□□□□ 0.15
HDAC4-201ENST00000345617 H0YIZ8 118 aa16.01■□□□□ 0.15
HDAC4-201ENST00000345617 TRAV8-3A0A0A6YYJ7 113 aa16.01■□□□□ 0.15
HDAC4-201ENST00000345617 hDV102S1A0JD36 115 aa16.01■□□□□ 0.15
HDAC4-201ENST00000345617 C17orf100A8MU93 164 aa16.01■□□□□ 0.15
HDAC4-201ENST00000345617 TET2Q6N021 2002 aaPredicted RBP16.01■□□□□ 0.15
HDAC4-201ENST00000345617 WFDC1Q9HC57 220 aa16.01■□□□□ 0.15
HDAC4-201ENST00000345617 IGKV1D-13A0A0B4J2D9 117 aa16■□□□□ 0.15
HDAC4-201ENST00000345617 SIVA1O15304 175 aa16■□□□□ 0.15
HDAC4-201ENST00000345617 TCRAP04437 139 aa16■□□□□ 0.15
HDAC4-201ENST00000345617 IGKV1-13P0DP09 117 aa16■□□□□ 0.15
HDAC4-201ENST00000345617 TAL2Q16559 108 aa16■□□□□ 0.15
HDAC4-201ENST00000345617 SAP25Q8TEE9 199 aa16■□□□□ 0.15
HDAC4-201ENST00000345617 A0A087WX48 190 aa16■□□□□ 0.15
HDAC4-201ENST00000345617 IGHV3-23P01764 117 aa16■□□□□ 0.15
HDAC4-201ENST00000345617 C9orf139Q6ZV77 190 aa16■□□□□ 0.15
HDAC4-201ENST00000345617 DSCR8Q96T75 97 aa16■□□□□ 0.15
HDAC4-201ENST00000345617 NPIPB5A8MRT5 1133 aa16■□□□□ 0.15
HDAC4-201ENST00000345617 RPUSD1Q9UJJ7 312 aaKnown RBP16■□□□□ 0.15
HDAC4-201ENST00000345617 K7EP34 96 aa16■□□□□ 0.15
HDAC4-201ENST00000345617 TMEM126AQ9H061 195 aa16■□□□□ 0.15
HDAC4-201ENST00000345617 GATA2P23769 480 aaPredicted RBP16■□□□□ 0.15
HDAC4-201ENST00000345617 Q6ZS49 121 aa16■□□□□ 0.15
HDAC4-201ENST00000345617 PSG7Q13046 419 aa15.99■□□□□ 0.15
HDAC4-201ENST00000345617 NMSQ5H8A3 153 aa15.99■□□□□ 0.15
HDAC4-201ENST00000345617 TRBV6-6A0A0A6YYG2 114 aa15.99■□□□□ 0.15
HDAC4-201ENST00000345617 HLA-DMBP28068 263 aa15.99■□□□□ 0.15
HDAC4-201ENST00000345617 HAX1O00165 279 aa15.99■□□□□ 0.15
HDAC4-201ENST00000345617 IGHV3-64A0A075B6Q5 118 aa15.99■□□□□ 0.15
HDAC4-201ENST00000345617 SPSB2Q99619 263 aa15.99■□□□□ 0.15
HDAC4-201ENST00000345617 IGHV2-70P01814 119 aa15.98■□□□□ 0.15
HDAC4-201ENST00000345617 SLAQ13239 276 aa15.98■□□□□ 0.15
HDAC4-201ENST00000345617 USMG5Q96IX5 58 aa15.98■□□□□ 0.15
HDAC4-201ENST00000345617 SLC25A45Q8N413 288 aa15.98■□□□□ 0.15
HDAC4-201ENST00000345617 PKIGQ9Y2B9 76 aa15.98■□□□□ 0.15
HDAC4-201ENST00000345617 SP7Q8TDD2 431 aaPredicted RBP15.98■□□□□ 0.15
HDAC4-201ENST00000345617 IMMP1LQ96LU5 166 aa15.98■□□□□ 0.15
HDAC4-201ENST00000345617 ANAPC10Q9UM13 185 aa15.98■□□□□ 0.15
HDAC4-201ENST00000345617 K7EP13 123 aa15.98■□□□□ 0.15
HDAC4-201ENST00000345617 SS18Q15532 418 aa15.98■□□□□ 0.15
HDAC4-201ENST00000345617 ANKHD1Q8IWZ3 2542 aaKnown RBP15.98■□□□□ 0.15
HDAC4-201ENST00000345617 SUMO4Q6EEV6 95 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 180.3 ms