RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 SLC25A32Q9H2D1 315 aa13.24□□□□□ -0.29
USF2-202ENST00000343550 UBE2CO00762 179 aa13.23□□□□□ -0.29
USF2-202ENST00000343550 PET100P0DJ07 73 aa13.23□□□□□ -0.29
USF2-202ENST00000343550 SNRPD3P62318 126 aaKnown RBP13.23□□□□□ -0.29
USF2-202ENST00000343550 PSMG4Q5JS54 123 aa13.23□□□□□ -0.29
USF2-202ENST00000343550 CHAC2Q8WUX2 184 aa13.23□□□□□ -0.29
USF2-202ENST00000343550 C17orf77Q96MU5 243 aa13.23□□□□□ -0.29
USF2-202ENST00000343550 GPR82Q96P67 336 aa13.23□□□□□ -0.29
USF2-202ENST00000343550 ARV1Q9H2C2 271 aa13.23□□□□□ -0.29
USF2-202ENST00000343550 HYDINQ4G0P3 5121 aa13.23□□□□□ -0.29
USF2-202ENST00000343550 UBE2L5PA0A1B0GUS4 154 aa13.23□□□□□ -0.29
USF2-202ENST00000343550 GALR1P47211 349 aa13.23□□□□□ -0.29
USF2-202ENST00000343550 PRR20EP86478 221 aa13.23□□□□□ -0.29
USF2-202ENST00000343550 PRR20CP86479 221 aa13.23□□□□□ -0.29
USF2-202ENST00000343550 PRR20DP86480 221 aa13.23□□□□□ -0.29
USF2-202ENST00000343550 PRR20BP86481 221 aa13.23□□□□□ -0.29
USF2-202ENST00000343550 PRR20AP86496 221 aa13.23□□□□□ -0.29
USF2-202ENST00000343550 BAXQ07812 192 aa13.23□□□□□ -0.29
USF2-202ENST00000343550 Q6ZWC4 215 aa13.23□□□□□ -0.29
USF2-202ENST00000343550 TMEM37Q8WXS4 190 aa13.23□□□□□ -0.29
USF2-202ENST00000343550 RSG1Q9BU20 258 aa13.23□□□□□ -0.29
USF2-202ENST00000343550 CSTL1Q9H114 145 aa13.23□□□□□ -0.29
USF2-202ENST00000343550 SOCS3O14543 225 aa13.22□□□□□ -0.29
USF2-202ENST00000343550 RPL29P47914 159 aaKnown RBP13.22□□□□□ -0.29
USF2-202ENST00000343550 MIC13Q5XKP0 118 aa13.22□□□□□ -0.29
USF2-202ENST00000343550 S100A7AQ86SG5 101 aa13.22□□□□□ -0.29
USF2-202ENST00000343550 STHQ8IWL8 128 aa13.22□□□□□ -0.29
USF2-202ENST00000343550 ELOA3CA0A087WX78 387 aaPredicted RBP13.21□□□□□ -0.29
USF2-202ENST00000343550 KNCNA6PVL3 124 aa13.21□□□□□ -0.29
USF2-202ENST00000343550 ID1P41134 155 aa13.21□□□□□ -0.29
USF2-202ENST00000343550 Q6ZRG5 221 aa13.21□□□□□ -0.29
USF2-202ENST00000343550 LINC00305Q7Z4B0 112 aa13.21□□□□□ -0.29
USF2-202ENST00000343550 DNAJC4Q9NNZ3 241 aa13.21□□□□□ -0.29
USF2-202ENST00000343550 MBD2Q9UBB5 411 aa13.21□□□□□ -0.29
USF2-202ENST00000343550 MPDU1O75352 247 aa13.2□□□□□ -0.3
USF2-202ENST00000343550 FGF7P21781 194 aa13.2□□□□□ -0.3
USF2-202ENST00000343550 RPL12P30050 165 aaKnown RBP13.2□□□□□ -0.3
USF2-202ENST00000343550 CLINT1Q14677 625 aa13.2□□□□□ -0.3
USF2-202ENST00000343550 OPCMLQ14982 345 aa13.2□□□□□ -0.3
USF2-202ENST00000343550 ACTL10Q5JWF8 245 aa13.2□□□□□ -0.3
USF2-202ENST00000343550 TRPT1Q86TN4 253 aaKnown RBP13.2□□□□□ -0.3
USF2-202ENST00000343550 AGRNO00468 2067 aa13.2□□□□□ -0.3
USF2-202ENST00000343550 ISLRO14498 428 aa13.19□□□□□ -0.3
USF2-202ENST00000343550 SPRY2O43597 315 aa13.19□□□□□ -0.3
USF2-202ENST00000343550 COX7A2P2O60397 106 aa13.19□□□□□ -0.3
USF2-202ENST00000343550 RPL7P18124 248 aaKnown RBP13.19□□□□□ -0.3
USF2-202ENST00000343550 PSMB3P49720 205 aa13.19□□□□□ -0.3
USF2-202ENST00000343550 MEOX2P50222 304 aa13.19□□□□□ -0.3
USF2-202ENST00000343550 DEFB135Q30KP9 77 aa13.19□□□□□ -0.3
USF2-202ENST00000343550 C10orf113Q5VZT2 155 aa13.19□□□□□ -0.3
USF2-202ENST00000343550 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.19□□□□□ -0.3
USF2-202ENST00000343550 THAP6Q8TBB0 222 aa13.19□□□□□ -0.3
USF2-202ENST00000343550 RNF183Q96D59 192 aa13.19□□□□□ -0.3
USF2-202ENST00000343550 LINC00052Q96N35 136 aa13.19□□□□□ -0.3
USF2-202ENST00000343550 SLC39A9Q9NUM3 307 aa13.19□□□□□ -0.3
USF2-202ENST00000343550 TP53TG1Q9Y2A0 90 aa13.19□□□□□ -0.3
USF2-202ENST00000343550 HSPB11Q9Y547 144 aa13.19□□□□□ -0.3
USF2-202ENST00000343550 B2MP61769 119 aa13.18□□□□□ -0.3
USF2-202ENST00000343550 SAMD13Q5VXD3 122 aa13.18□□□□□ -0.3
USF2-202ENST00000343550 NPCDR1Q9BY65 106 aa13.18□□□□□ -0.3
USF2-202ENST00000343550 RNF24Q9Y225 148 aa13.18□□□□□ -0.3
USF2-202ENST00000343550 MRPS12O15235 138 aaKnown RBP13.18□□□□□ -0.3
USF2-202ENST00000343550 MORN5Q5VZ52 161 aa13.18□□□□□ -0.3
USF2-202ENST00000343550 C16orf92Q96LL3 132 aa13.18□□□□□ -0.3
USF2-202ENST00000343550 PXMP4Q9Y6I8 212 aa13.18□□□□□ -0.3
USF2-202ENST00000343550 A0A0J9YWU9 116 aa13.17□□□□□ -0.3
USF2-202ENST00000343550 Q5BKY6 102 aa13.17□□□□□ -0.3
USF2-202ENST00000343550 OR1L4Q8NGR5 311 aa13.17□□□□□ -0.3
USF2-202ENST00000343550 ATP5SQ99766 215 aa13.17□□□□□ -0.3
USF2-202ENST00000343550 WDR61Q9GZS3 305 aaKnown RBP13.17□□□□□ -0.3
USF2-202ENST00000343550 BIRC6Q9NR09 4857 aa13.17□□□□□ -0.3
USF2-202ENST00000343550 CXorf65A6NEN9 183 aa13.16□□□□□ -0.3
USF2-202ENST00000343550 H3BMM0 161 aa13.16□□□□□ -0.3
USF2-202ENST00000343550 GIG44P09565 113 aaPredicted RBP13.16□□□□□ -0.3
USF2-202ENST00000343550 GIPP09681 153 aaPredicted RBP13.16□□□□□ -0.3
USF2-202ENST00000343550 ATF4P18848 351 aaPredicted RBP13.16□□□□□ -0.3
USF2-202ENST00000343550 DEFB1P60022 68 aa13.16□□□□□ -0.3
USF2-202ENST00000343550 FGL1Q08830 312 aa13.16□□□□□ -0.3
USF2-202ENST00000343550 ASB13Q8WXK3 278 aa13.16□□□□□ -0.3
USF2-202ENST00000343550 C20orf173Q96LM9 149 aa13.16□□□□□ -0.3
USF2-202ENST00000343550 PFDN5Q99471 154 aa13.16□□□□□ -0.3
USF2-202ENST00000343550 A0A087X0K7 114 aa13.15□□□□□ -0.3
USF2-202ENST00000343550 TRAV8-2A0A0B4J237 113 aa13.15□□□□□ -0.3
USF2-202ENST00000343550 CA1P00915 261 aaPredicted RBP13.15□□□□□ -0.3
USF2-202ENST00000343550 PMS2P11Q13670 270 aa13.15□□□□□ -0.3
USF2-202ENST00000343550 GDF5OSQ5U4N7 250 aa13.15□□□□□ -0.3
USF2-202ENST00000343550 IGFL4Q6B9Z1 124 aa13.15□□□□□ -0.3
USF2-202ENST00000343550 MORN3Q6PF18 240 aaPredicted RBP13.15□□□□□ -0.3
USF2-202ENST00000343550 GATAD1Q8WUU5 269 aa13.15□□□□□ -0.3
USF2-202ENST00000343550 SMIM3Q9BZL3 60 aa13.15□□□□□ -0.3
USF2-202ENST00000343550 SAV1Q9H4B6 383 aaPredicted RBP13.15□□□□□ -0.3
USF2-202ENST00000343550 TRAV5A0A0B4J249 113 aa13.14□□□□□ -0.31
USF2-202ENST00000343550 SPP1P10451 314 aa13.14□□□□□ -0.31
USF2-202ENST00000343550 HLA-DRB4P13762 266 aa13.14□□□□□ -0.31
USF2-202ENST00000343550 FOXI2Q6ZQN5 318 aa13.14□□□□□ -0.31
USF2-202ENST00000343550 BPIFA4PQ86YQ2 179 aa13.14□□□□□ -0.31
USF2-202ENST00000343550 LINC00476Q8WZB0 136 aa13.14□□□□□ -0.31
USF2-202ENST00000343550 WFDC1Q9HC57 220 aa13.14□□□□□ -0.31
USF2-202ENST00000343550 RPRMQ9NS64 109 aa13.14□□□□□ -0.31
USF2-202ENST00000343550 HLA-DRB4X5D2U9 266 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms