RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 OR5AN1Q8NGI8 311 aa11.89□□□□□ -0.51
CLCN1-201ENST00000343257 RITA1Q96K30 269 aa11.89□□□□□ -0.51
CLCN1-201ENST00000343257 KLF12Q9Y4X4 402 aa11.89□□□□□ -0.51
CLCN1-201ENST00000343257 C9orf172C9J069 976 aa11.88□□□□□ -0.51
CLCN1-201ENST00000343257 M0R1B8 84 aa11.88□□□□□ -0.51
CLCN1-201ENST00000343257 FXYD2P54710 66 aa11.88□□□□□ -0.51
CLCN1-201ENST00000343257 POU2AF1Q16633 256 aa11.88□□□□□ -0.51
CLCN1-201ENST00000343257 PMS2CLQ68D20 193 aa11.88□□□□□ -0.51
CLCN1-201ENST00000343257 ZNF788Q6ZQV5 615 aa11.88□□□□□ -0.51
CLCN1-201ENST00000343257 SIGLEC8Q9NYZ4 499 aa11.88□□□□□ -0.51
CLCN1-201ENST00000343257 HAX1O00165 279 aa11.88□□□□□ -0.51
CLCN1-201ENST00000343257 ADAMTSL5Q6ZMM2 481 aa11.88□□□□□ -0.51
CLCN1-201ENST00000343257 UBALD2Q8IYN6 164 aa11.88□□□□□ -0.51
CLCN1-201ENST00000343257 BOD1L2Q8IYS8 172 aa11.88□□□□□ -0.51
CLCN1-201ENST00000343257 SOX21Q9Y651 276 aaPredicted RBP11.87□□□□□ -0.51
CLCN1-201ENST00000343257 PKDREJQ9NTG1 2253 aa11.87□□□□□ -0.51
CLCN1-201ENST00000343257 RIGQ13278 110 aa11.87□□□□□ -0.51
CLCN1-201ENST00000343257 BCL6BQ8N143 479 aaPredicted RBP11.87□□□□□ -0.51
CLCN1-201ENST00000343257 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.87□□□□□ -0.51
CLCN1-201ENST00000343257 ZNF414Q96IQ9 312 aa11.87□□□□□ -0.51
CLCN1-201ENST00000343257 CR1LQ2VPA4 569 aa11.87□□□□□ -0.51
CLCN1-201ENST00000343257 C9orf106Q8NAJ2 232 aa11.87□□□□□ -0.51
CLCN1-201ENST00000343257 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.86□□□□□ -0.51
CLCN1-201ENST00000343257 SMIM13P0DJ93 91 aa11.86□□□□□ -0.51
CLCN1-201ENST00000343257 DLX1P56177 255 aa11.86□□□□□ -0.51
CLCN1-201ENST00000343257 WFDC2Q14508 124 aa11.86□□□□□ -0.51
CLCN1-201ENST00000343257 SH2D6Q7Z4S9 175 aa11.86□□□□□ -0.51
CLCN1-201ENST00000343257 ABHD17AQ96GS6 310 aa11.86□□□□□ -0.51
CLCN1-201ENST00000343257 ZNF492Q9P255 531 aa11.86□□□□□ -0.51
CLCN1-201ENST00000343257 PPIAL4EA0A075B759 164 aa11.86□□□□□ -0.51
CLCN1-201ENST00000343257 A0A1W2PPI3 338 aa11.86□□□□□ -0.51
CLCN1-201ENST00000343257 PPIAL4FP0DN26 164 aa11.86□□□□□ -0.51
CLCN1-201ENST00000343257 ZCCHC24Q8N2G6 241 aaKnown RBP11.86□□□□□ -0.51
CLCN1-201ENST00000343257 NHP2Q9NX24 153 aaKnown RBP11.86□□□□□ -0.51
CLCN1-201ENST00000343257 POLEQ07864 2286 aa11.86□□□□□ -0.51
CLCN1-201ENST00000343257 DMXL2Q8TDJ6 3036 aa11.86□□□□□ -0.51
CLCN1-201ENST00000343257 SPAARA0A1B0GVQ0 90 aa11.85□□□□□ -0.51
CLCN1-201ENST00000343257 KIR2DL2P43627 348 aaPredicted RBP11.85□□□□□ -0.51
CLCN1-201ENST00000343257 SUB1P53999 127 aaKnown RBP eCLIP11.85□□□□□ -0.51
CLCN1-201ENST00000343257 CT83Q5H943 113 aa11.85□□□□□ -0.51
CLCN1-201ENST00000343257 SLC25A48Q6ZT89 311 aaKnown RBP11.85□□□□□ -0.51
CLCN1-201ENST00000343257 PRELID3AQ96N28 172 aa11.85□□□□□ -0.51
CLCN1-201ENST00000343257 SIGMAR1Q99720 223 aa11.85□□□□□ -0.51
CLCN1-201ENST00000343257 RPUSD1Q9UJJ7 312 aaKnown RBP11.85□□□□□ -0.51
CLCN1-201ENST00000343257 ZNF785A8K8V0 405 aa11.85□□□□□ -0.51
CLCN1-201ENST00000343257 GP9P14770 177 aa11.85□□□□□ -0.51
CLCN1-201ENST00000343257 TNFRSF1AP19438 455 aa11.85□□□□□ -0.51
CLCN1-201ENST00000343257 TNFRSF14Q92956 283 aa11.85□□□□□ -0.51
CLCN1-201ENST00000343257 CSMD1Q96PZ7 3565 aa11.85□□□□□ -0.51
CLCN1-201ENST00000343257 IGKV2D-26A0A0A0MRZ7 120 aa11.85□□□□□ -0.51
CLCN1-201ENST00000343257 AMTNQ6UX39 209 aa11.85□□□□□ -0.51
CLCN1-201ENST00000343257 OR10X1Q8NGY0 326 aa11.85□□□□□ -0.51
CLCN1-201ENST00000343257 GFRA4Q9GZZ7 299 aa11.85□□□□□ -0.51
CLCN1-201ENST00000343257 M0R3E3 92 aa11.84□□□□□ -0.51
CLCN1-201ENST00000343257 STXBP6Q8NFX7 210 aa11.84□□□□□ -0.51
CLCN1-201ENST00000343257 OR5A1Q8NGJ0 315 aa11.84□□□□□ -0.51
CLCN1-201ENST00000343257 C8orf49Q96NF6 230 aa11.84□□□□□ -0.51
CLCN1-201ENST00000343257 PRSS47A8MTI9 375 aa11.84□□□□□ -0.51
CLCN1-201ENST00000343257 M0R296 226 aa11.84□□□□□ -0.51
CLCN1-201ENST00000343257 RBP4P02753 201 aa11.84□□□□□ -0.51
CLCN1-201ENST00000343257 LCNL1Q6ZST4 164 aa11.84□□□□□ -0.51
CLCN1-201ENST00000343257 RPRMLQ8N4K4 120 aa11.84□□□□□ -0.51
CLCN1-201ENST00000343257 IFI27L1Q96BM0 104 aa11.84□□□□□ -0.51
CLCN1-201ENST00000343257 GAFA1Q96PS6 74 aa11.84□□□□□ -0.51
CLCN1-201ENST00000343257 S4R3C0 116 aa11.84□□□□□ -0.51
CLCN1-201ENST00000343257 APOBEC3AP31941 199 aaPredicted RBP11.83□□□□□ -0.51
CLCN1-201ENST00000343257 LYZL1Q6UWQ5 148 aa11.83□□□□□ -0.51
CLCN1-201ENST00000343257 MDS2Q8NDY4 140 aa11.83□□□□□ -0.51
CLCN1-201ENST00000343257 A0A1W2PNU3 283 aaPredicted RBP11.83□□□□□ -0.52
CLCN1-201ENST00000343257 IGLV2-11P01706 119 aa11.83□□□□□ -0.52
CLCN1-201ENST00000343257 FCER1GP30273 86 aa11.83□□□□□ -0.52
CLCN1-201ENST00000343257 MZT1Q08AG7 82 aa11.83□□□□□ -0.52
CLCN1-201ENST00000343257 ETDBQ3ZM63 59 aa11.83□□□□□ -0.52
CLCN1-201ENST00000343257 MBNL2Q5VZF2 373 aaKnown RBP11.83□□□□□ -0.52
CLCN1-201ENST00000343257 OSR1Q8TAX0 266 aaPredicted RBP11.83□□□□□ -0.52
CLCN1-201ENST00000343257 ARPC1AQ92747 370 aa11.83□□□□□ -0.52
CLCN1-201ENST00000343257 CACNA1GO43497 2377 aa11.82□□□□□ -0.52
CLCN1-201ENST00000343257 CNTFRP26992 372 aa11.82□□□□□ -0.52
CLCN1-201ENST00000343257 CCL8P80075 99 aa11.82□□□□□ -0.52
CLCN1-201ENST00000343257 GTSCR1Q86UQ5 136 aa11.82□□□□□ -0.52
CLCN1-201ENST00000343257 OR4X2Q8NGF9 303 aa11.82□□□□□ -0.52
CLCN1-201ENST00000343257 OR9G4Q8NGQ1 327 aa11.82□□□□□ -0.52
CLCN1-201ENST00000343257 FAM222BQ8WU58 562 aa11.82□□□□□ -0.52
CLCN1-201ENST00000343257 HIGD1AQ9Y241 93 aa11.82□□□□□ -0.52
CLCN1-201ENST00000343257 OVOL3O00110 214 aa11.82□□□□□ -0.52
CLCN1-201ENST00000343257 CRIP1P50238 77 aa11.82□□□□□ -0.52
CLCN1-201ENST00000343257 THAP8Q8NA92 274 aa11.82□□□□□ -0.52
CLCN1-201ENST00000343257 RNF7Q9UBF6 113 aa11.82□□□□□ -0.52
CLCN1-201ENST00000343257 TACC2O95359 2948 aa11.82□□□□□ -0.52
CLCN1-201ENST00000343257 GAGE12HA6NDE8 117 aa11.81□□□□□ -0.52
CLCN1-201ENST00000343257 C16orf54Q6UWD8 224 aa11.81□□□□□ -0.52
CLCN1-201ENST00000343257 NPIPB6E9PJ23 425 aa11.81□□□□□ -0.52
CLCN1-201ENST00000343257 H3BMG7 143 aa11.81□□□□□ -0.52
CLCN1-201ENST00000343257 TNFAIP6P98066 277 aaPredicted RBP11.81□□□□□ -0.52
CLCN1-201ENST00000343257 ATP5G2Q06055 141 aa11.81□□□□□ -0.52
CLCN1-201ENST00000343257 LGALS9BQ3B8N2 356 aa11.81□□□□□ -0.52
CLCN1-201ENST00000343257 LGALS9CQ6DKI2 356 aa11.81□□□□□ -0.52
CLCN1-201ENST00000343257 NDUFS7O75251 213 aa11.81□□□□□ -0.52
CLCN1-201ENST00000343257 NPYP01303 97 aa11.81□□□□□ -0.52
CLCN1-201ENST00000343257 ATP5IP56385 69 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms