RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 IGHV1-8P0DP01 117 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 FXYD7P58549 80 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 RBX1P62877 108 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 LY6DQ14210 128 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 BVES-AS1Q5T3Y7 98 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 LYPD2Q6UXB3 125 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 ZNF48Q96MX3 618 aaPredicted RBP6.58□□□□□ -1.36
UBE4B-202ENST00000343090 RCHY1Q96PM5 261 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 GEMIN7Q9H840 131 aaKnown RBP6.58□□□□□ -1.36
UBE4B-202ENST00000343090 NPIPB5A8MRT5 1133 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 TMEM178BH3BS89 294 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 SRD5A1P18405 259 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 SFTA2Q6UW10 78 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 C8orf46Q8TAG6 207 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 C18orf32Q8TCD1 76 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 FAM168AQ92567 244 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 NEUROG1Q92886 237 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 LINC00479Q96M42 142 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 ZNF672Q499Z4 452 aaPredicted RBP6.58□□□□□ -1.36
UBE4B-202ENST00000343090 PVRIGQ6DKI7 326 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 ZNF474Q6S9Z5 364 aaPredicted RBP6.58□□□□□ -1.36
UBE4B-202ENST00000343090 Q6ZS49 121 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 DEFB104AQ8WTQ1 72 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 CYYR1Q96J86 154 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 TRAV8-1A0A0A6YYK1 113 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 A0A0G2JNJ9 132 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 H0YJW9 148 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 WNT2P09544 360 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 PSG3Q16557 428 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 Q8NFD4 153 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 OR9G4Q8NGQ1 327 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 Q9UFV3 132 aa6.58□□□□□ -1.36
UBE4B-202ENST00000343090 FABP5P3A8MUU1 101 aa6.57□□□□□ -1.36
UBE4B-202ENST00000343090 ETV2O00321 342 aaPredicted RBP6.57□□□□□ -1.36
UBE4B-202ENST00000343090 THBDP07204 575 aa6.57□□□□□ -1.36
UBE4B-202ENST00000343090 IGFL4Q6B9Z1 124 aa6.57□□□□□ -1.36
UBE4B-202ENST00000343090 COLCA1Q6ZS62 124 aa6.57□□□□□ -1.36
UBE4B-202ENST00000343090 RPRMLQ8N4K4 120 aa6.57□□□□□ -1.36
UBE4B-202ENST00000343090 IGHV1-3A0A0C4DH29 117 aa6.57□□□□□ -1.36
UBE4B-202ENST00000343090 C9orf118A6NHY6 69 aa6.57□□□□□ -1.36
UBE4B-202ENST00000343090 K7EP34 96 aa6.57□□□□□ -1.36
UBE4B-202ENST00000343090 CIRBPQ14011 172 aaKnown RBP6.57□□□□□ -1.36
UBE4B-202ENST00000343090 YPEL4Q96NS1 127 aa6.57□□□□□ -1.36
UBE4B-202ENST00000343090 FRMPD3Q5JV73 1810 aa6.57□□□□□ -1.36
UBE4B-202ENST00000343090 NCR2O95944 276 aa6.57□□□□□ -1.36
UBE4B-202ENST00000343090 WDR86Q86TI4 376 aa6.57□□□□□ -1.36
UBE4B-202ENST00000343090 BCL6BQ8N143 479 aaPredicted RBP6.57□□□□□ -1.36
UBE4B-202ENST00000343090 LY96Q9Y6Y9 160 aa6.57□□□□□ -1.36
UBE4B-202ENST00000343090 DENND4CQ5VZ89 1909 aa6.57□□□□□ -1.36
UBE4B-202ENST00000343090 SPINK8P0C7L1 97 aa6.57□□□□□ -1.36
UBE4B-202ENST00000343090 ZNF138P52744 262 aa6.57□□□□□ -1.36
UBE4B-202ENST00000343090 Q6AWC8 147 aa6.57□□□□□ -1.36
UBE4B-202ENST00000343090 DUX4L9Q6RFH8 374 aaPredicted RBP6.57□□□□□ -1.36
UBE4B-202ENST00000343090 TMEM219Q86XT9 240 aa6.57□□□□□ -1.36
UBE4B-202ENST00000343090 NUP35Q8NFH5 326 aa6.57□□□□□ -1.36
UBE4B-202ENST00000343090 H3BRM9 83 aa6.56□□□□□ -1.36
UBE4B-202ENST00000343090 SLC25A48Q6ZT89 311 aaKnown RBP6.56□□□□□ -1.36
UBE4B-202ENST00000343090 SLC25A39Q9BZJ4 359 aaPredicted RBP6.56□□□□□ -1.36
UBE4B-202ENST00000343090 LSM4Q9Y4Z0 139 aaKnown RBP6.56□□□□□ -1.36
UBE4B-202ENST00000343090 IGKV1-39P01597 117 aa6.56□□□□□ -1.36
UBE4B-202ENST00000343090 PPBPP02775 128 aa6.56□□□□□ -1.36
UBE4B-202ENST00000343090 IGKV1D-39P04432 117 aa6.56□□□□□ -1.36
UBE4B-202ENST00000343090 MBNL3Q9NUK0 354 aaKnown RBP6.56□□□□□ -1.36
UBE4B-202ENST00000343090 A0A1B0GW15 77 aa6.56□□□□□ -1.36
UBE4B-202ENST00000343090 RASL11AQ6T310 242 aa6.56□□□□□ -1.36
UBE4B-202ENST00000343090 ATP5L2Q7Z4Y8 100 aa6.56□□□□□ -1.36
UBE4B-202ENST00000343090 ITLN2Q8WWU7 325 aaPredicted RBP6.56□□□□□ -1.36
UBE4B-202ENST00000343090 A0A1W2PRX2 142 aa6.56□□□□□ -1.36
UBE4B-202ENST00000343090 ATP5LO75964 103 aa6.56□□□□□ -1.36
UBE4B-202ENST00000343090 MEIG1Q5JSS6 88 aa6.56□□□□□ -1.36
UBE4B-202ENST00000343090 ZFAND6Q6FIF0 208 aa6.56□□□□□ -1.36
UBE4B-202ENST00000343090 Q8TAT8 98 aa6.56□□□□□ -1.36
UBE4B-202ENST00000343090 TMEM167AQ8TBQ9 72 aa6.56□□□□□ -1.36
UBE4B-202ENST00000343090 VKORC1Q9BQB6 163 aa6.56□□□□□ -1.36
UBE4B-202ENST00000343090 TCRAP04437 139 aa6.55□□□□□ -1.36
UBE4B-202ENST00000343090 Q6ZR03 302 aa6.55□□□□□ -1.36
UBE4B-202ENST00000343090 VMO1Q7Z5L0 202 aa6.55□□□□□ -1.36
UBE4B-202ENST00000343090 GAGE12HA6NDE8 117 aa6.55□□□□□ -1.36
UBE4B-202ENST00000343090 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.55□□□□□ -1.36
UBE4B-202ENST00000343090 NPFFO15130 113 aa6.55□□□□□ -1.36
UBE4B-202ENST00000343090 RNASE1P07998 156 aaKnown RBP6.55□□□□□ -1.36
UBE4B-202ENST00000343090 RNASE2P10153 161 aaKnown RBP6.55□□□□□ -1.36
UBE4B-202ENST00000343090 LMO1P25800 156 aa6.55□□□□□ -1.36
UBE4B-202ENST00000343090 ERVK11-1P61568 191 aa6.55□□□□□ -1.36
UBE4B-202ENST00000343090 OR5AN1Q8NGI8 311 aa6.55□□□□□ -1.36
UBE4B-202ENST00000343090 VCX2Q9H322 139 aa6.55□□□□□ -1.36
UBE4B-202ENST00000343090 CHD3Q12873 2000 aaKnown RBP6.55□□□□□ -1.36
UBE4B-202ENST00000343090 SPTAN1Q13813 2472 aaKnown RBP6.55□□□□□ -1.36
UBE4B-202ENST00000343090 TRAV8-2A0A0B4J237 113 aa6.55□□□□□ -1.36
UBE4B-202ENST00000343090 MBD3L4A6NDZ8 208 aaPredicted RBP6.55□□□□□ -1.36
UBE4B-202ENST00000343090 MBD3L3A6NE82 208 aaPredicted RBP6.55□□□□□ -1.36
UBE4B-202ENST00000343090 MBD3L5A6NJ08 208 aaPredicted RBP6.55□□□□□ -1.36
UBE4B-202ENST00000343090 IGHG3P01860 377 aa6.55□□□□□ -1.36
UBE4B-202ENST00000343090 CD7P09564 240 aa6.55□□□□□ -1.36
UBE4B-202ENST00000343090 COL8A2P25067 703 aa6.55□□□□□ -1.36
UBE4B-202ENST00000343090 MBD3L2Q8NHZ7 208 aaPredicted RBP6.55□□□□□ -1.36
UBE4B-202ENST00000343090 CHTOPQ9Y3Y2 248 aaKnown RBP6.55□□□□□ -1.36
UBE4B-202ENST00000343090 YLPM1P49750 1951 aaKnown RBP6.55□□□□□ -1.36
UBE4B-202ENST00000343090 TRAV40A0A0B4J280 105 aa6.55□□□□□ -1.36
UBE4B-202ENST00000343090 HBDP02042 147 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms