RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 C9orf118A6NHY6 69 aa12.11□□□□□ -0.47
BRAT1-201ENST00000340611 F2RL2O00254 374 aa12.11□□□□□ -0.47
BRAT1-201ENST00000340611 STAG3L2P0CL84 134 aa12.11□□□□□ -0.47
BRAT1-201ENST00000340611 CD24P25063 80 aa12.11□□□□□ -0.47
BRAT1-201ENST00000340611 HIST1H1AQ02539 215 aaPredicted RBP12.11□□□□□ -0.47
BRAT1-201ENST00000340611 EIF4EBP1Q13541 118 aaPredicted RBP12.11□□□□□ -0.47
BRAT1-201ENST00000340611 CT45A1Q5HYN5 189 aa12.11□□□□□ -0.47
BRAT1-201ENST00000340611 ABHD12Q8N2K0 398 aa12.11□□□□□ -0.47
BRAT1-201ENST00000340611 TMEM116Q8NCL8 245 aa12.11□□□□□ -0.47
BRAT1-201ENST00000340611 CT45A3Q8NHU0 189 aa12.11□□□□□ -0.47
BRAT1-201ENST00000340611 NEU4Q8WWR8 484 aaPredicted RBP12.11□□□□□ -0.47
BRAT1-201ENST00000340611 RAB1CQ92928 201 aa12.11□□□□□ -0.47
BRAT1-201ENST00000340611 HEYLQ9NQ87 328 aaPredicted RBP12.11□□□□□ -0.47
BRAT1-201ENST00000340611 TRBV9A0A0B4J1U6 114 aa12.11□□□□□ -0.47
BRAT1-201ENST00000340611 hADV38S2A0JD32 116 aa12.11□□□□□ -0.47
BRAT1-201ENST00000340611 IGHV4-39P01824 125 aa12.11□□□□□ -0.47
BRAT1-201ENST00000340611 CX3CL1P78423 397 aa12.11□□□□□ -0.47
BRAT1-201ENST00000340611 TMEM97Q5BJF2 176 aa12.11□□□□□ -0.47
BRAT1-201ENST00000340611 GGTLC1Q9BX51 225 aa12.11□□□□□ -0.47
BRAT1-201ENST00000340611 TNFRSF19Q9NS68 423 aa12.11□□□□□ -0.47
BRAT1-201ENST00000340611 CXorf1O96002 111 aa12.1□□□□□ -0.47
BRAT1-201ENST00000340611 MT-ND6P03923 174 aa12.1□□□□□ -0.47
BRAT1-201ENST00000340611 ATP5G2Q06055 141 aa12.1□□□□□ -0.47
BRAT1-201ENST00000340611 CD300EQ496F6 205 aaPredicted RBP12.1□□□□□ -0.47
BRAT1-201ENST00000340611 CCL19Q99731 98 aa12.1□□□□□ -0.47
BRAT1-201ENST00000340611 AMY1AP04745 511 aa12.1□□□□□ -0.47
BRAT1-201ENST00000340611 CRYBB3P26998 211 aa12.1□□□□□ -0.47
BRAT1-201ENST00000340611 CR1LQ2VPA4 569 aa12.1□□□□□ -0.47
BRAT1-201ENST00000340611 ZBTB34Q8NCN2 500 aa12.1□□□□□ -0.47
BRAT1-201ENST00000340611 ZNF714Q96N38 554 aa12.1□□□□□ -0.47
BRAT1-201ENST00000340611 FCGR3BO75015 233 aa12.1□□□□□ -0.47
BRAT1-201ENST00000340611 GCHFRP30047 84 aa12.1□□□□□ -0.47
BRAT1-201ENST00000340611 CAMPP49913 170 aa12.1□□□□□ -0.47
BRAT1-201ENST00000340611 TM4SF20Q53R12 229 aa12.1□□□□□ -0.47
BRAT1-201ENST00000340611 BPIFA4PQ86YQ2 179 aa12.1□□□□□ -0.47
BRAT1-201ENST00000340611 NHLRC2Q8NBF2 726 aa12.1□□□□□ -0.47
BRAT1-201ENST00000340611 EAF1Q96JC9 268 aaPredicted RBP12.1□□□□□ -0.47
BRAT1-201ENST00000340611 BPESC1Q9GZL8 116 aa12.1□□□□□ -0.47
BRAT1-201ENST00000340611 ZNF331Q9NQX6 463 aaPredicted RBP12.1□□□□□ -0.47
BRAT1-201ENST00000340611 IDI2-AS1Q9NZ38 188 aa12.1□□□□□ -0.47
BRAT1-201ENST00000340611 LINC00312Q9Y6C7 94 aa12.1□□□□□ -0.47
BRAT1-201ENST00000340611 REG1BP48304 166 aa12.09□□□□□ -0.47
BRAT1-201ENST00000340611 HERV-K104P63124 156 aa12.09□□□□□ -0.47
BRAT1-201ENST00000340611 DIAPH2-AS1Q14236 149 aa12.09□□□□□ -0.47
BRAT1-201ENST00000340611 KIR3DS1Q14943 382 aa12.09□□□□□ -0.47
BRAT1-201ENST00000340611 PQLC2Q6ZP29 291 aa12.09□□□□□ -0.47
BRAT1-201ENST00000340611 ZNF479Q96JC4 524 aa12.09□□□□□ -0.47
BRAT1-201ENST00000340611 IFI27L2Q9H2X8 130 aa12.09□□□□□ -0.47
BRAT1-201ENST00000340611 SCRT2Q9NQ03 307 aa12.09□□□□□ -0.47
BRAT1-201ENST00000340611 KAAG1Q9UBP8 84 aa12.09□□□□□ -0.47
BRAT1-201ENST00000340611 TRAV3A0A0B4J244 114 aa12.09□□□□□ -0.47
BRAT1-201ENST00000340611 ACTL6BO94805 426 aa12.09□□□□□ -0.47
BRAT1-201ENST00000340611 COX6B1P14854 86 aa12.09□□□□□ -0.47
BRAT1-201ENST00000340611 OPRK1P41145 380 aa12.09□□□□□ -0.47
BRAT1-201ENST00000340611 GPR12P47775 334 aa12.09□□□□□ -0.47
BRAT1-201ENST00000340611 SRSF8Q9BRL6 282 aaKnown RBP12.09□□□□□ -0.47
BRAT1-201ENST00000340611 TRAV9-1A0A075B6T8 112 aa12.08□□□□□ -0.48
BRAT1-201ENST00000340611 PLA2G2AP14555 144 aa12.08□□□□□ -0.48
BRAT1-201ENST00000340611 EFNA4P52798 201 aa12.08□□□□□ -0.48
BRAT1-201ENST00000340611 FOXA3P55318 350 aaPredicted RBP12.08□□□□□ -0.48
BRAT1-201ENST00000340611 TIMD4Q96H15 378 aa12.08□□□□□ -0.48
BRAT1-201ENST00000340611 JPT1Q9UK76 154 aa12.08□□□□□ -0.48
BRAT1-201ENST00000340611 PLXNB1O43157 2135 aa12.08□□□□□ -0.48
BRAT1-201ENST00000340611 TNCP24821 2201 aa12.08□□□□□ -0.48
BRAT1-201ENST00000340611 OVOL3O00110 214 aa12.08□□□□□ -0.48
BRAT1-201ENST00000340611 CNIH1O95406 144 aa12.08□□□□□ -0.48
BRAT1-201ENST00000340611 HLA-DQA1P01909 254 aa12.08□□□□□ -0.48
BRAT1-201ENST00000340611 PSG3Q16557 428 aa12.08□□□□□ -0.48
BRAT1-201ENST00000340611 MTURNQ8N3F0 131 aa12.08□□□□□ -0.48
BRAT1-201ENST00000340611 SYS1-DBNDD2H3BUS1 97 aa12.07□□□□□ -0.48
BRAT1-201ENST00000340611 SAA2P0DJI9 122 aaPredicted RBP12.07□□□□□ -0.48
BRAT1-201ENST00000340611 TMEM249Q2WGJ8 235 aa12.07□□□□□ -0.48
BRAT1-201ENST00000340611 TRAT1Q6PIZ9 186 aa12.07□□□□□ -0.48
BRAT1-201ENST00000340611 ADAMTSL5Q6ZMM2 481 aa12.07□□□□□ -0.48
BRAT1-201ENST00000340611 A0A1W2PRD5 423 aa12.07□□□□□ -0.48
BRAT1-201ENST00000340611 A0A1W2PRF3 423 aa12.07□□□□□ -0.48
BRAT1-201ENST00000340611 A0A1W2PRM7 423 aa12.07□□□□□ -0.48
BRAT1-201ENST00000340611 CENPWQ5EE01 88 aa12.07□□□□□ -0.48
BRAT1-201ENST00000340611 OR4A16Q8NH70 328 aa12.07□□□□□ -0.48
BRAT1-201ENST00000340611 VSTM2AQ8TAG5 236 aa12.07□□□□□ -0.48
BRAT1-201ENST00000340611 ONECUT1Q9UBC0 465 aa12.07□□□□□ -0.48
BRAT1-201ENST00000340611 RPUSD1Q9UJJ7 312 aaKnown RBP12.07□□□□□ -0.48
BRAT1-201ENST00000340611 ZFP36P26651 326 aaKnown RBP12.07□□□□□ -0.48
BRAT1-201ENST00000340611 C2orf91Q6ZV80 131 aa12.07□□□□□ -0.48
BRAT1-201ENST00000340611 C1orf159Q96HA4 380 aa12.07□□□□□ -0.48
BRAT1-201ENST00000340611 ZNF469Q96JG9 3925 aaPredicted RBP12.06□□□□□ -0.48
BRAT1-201ENST00000340611 COX7A1P24310 79 aa12.06□□□□□ -0.48
BRAT1-201ENST00000340611 GNG4P50150 75 aa12.06□□□□□ -0.48
BRAT1-201ENST00000340611 MFAP2P55001 183 aa12.06□□□□□ -0.48
BRAT1-201ENST00000340611 TMEM155Q4W5P6 130 aa12.06□□□□□ -0.48
BRAT1-201ENST00000340611 C1orf122Q6ZSJ8 110 aa12.06□□□□□ -0.48
BRAT1-201ENST00000340611 FAM168AQ92567 244 aa12.06□□□□□ -0.48
BRAT1-201ENST00000340611 MRAP2Q96G30 205 aa12.06□□□□□ -0.48
BRAT1-201ENST00000340611 PSMB11A5LHX3 300 aa12.06□□□□□ -0.48
BRAT1-201ENST00000340611 DLX6P56179 175 aa12.06□□□□□ -0.48
BRAT1-201ENST00000340611 SH2D6Q7Z4S9 175 aa12.06□□□□□ -0.48
BRAT1-201ENST00000340611 TXNDC17Q9BRA2 123 aa12.06□□□□□ -0.48
BRAT1-201ENST00000340611 TMEM191AQ9H0A3 160 aa12.06□□□□□ -0.48
BRAT1-201ENST00000340611 ABCA1O95477 2261 aa12.06□□□□□ -0.48
BRAT1-201ENST00000340611 MPDU1O75352 247 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms