RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 A0A1B0GUS0 222 aa8.58□□□□□ -1.04
RTN3-201ENST00000338850 E7EUB6 86 aa8.58□□□□□ -1.04
RTN3-201ENST00000338850 NPIPB6E9PJ23 425 aa8.58□□□□□ -1.04
RTN3-201ENST00000338850 LTAP01374 205 aa8.58□□□□□ -1.04
RTN3-201ENST00000338850 GP9P14770 177 aa8.58□□□□□ -1.04
RTN3-201ENST00000338850 GATA2P23769 480 aaPredicted RBP8.58□□□□□ -1.04
RTN3-201ENST00000338850 APOBEC3AP31941 199 aaPredicted RBP8.58□□□□□ -1.04
RTN3-201ENST00000338850 UBE2G1P62253 170 aa8.58□□□□□ -1.04
RTN3-201ENST00000338850 C16orf54Q6UWD8 224 aa8.58□□□□□ -1.04
RTN3-201ENST00000338850 LINC00305Q7Z4B0 112 aa8.58□□□□□ -1.04
RTN3-201ENST00000338850 MUC15Q8N387 334 aa8.58□□□□□ -1.04
RTN3-201ENST00000338850 ARL6IP6Q8N6S5 226 aa8.58□□□□□ -1.04
RTN3-201ENST00000338850 GATD1Q8NB37 220 aa8.58□□□□□ -1.04
RTN3-201ENST00000338850 C18orf32Q8TCD1 76 aa8.58□□□□□ -1.04
RTN3-201ENST00000338850 ZNF48Q96MX3 618 aaPredicted RBP8.58□□□□□ -1.04
RTN3-201ENST00000338850 OTORQ9NRC9 128 aa8.58□□□□□ -1.04
RTN3-201ENST00000338850 ARFGEF3Q5TH69 2177 aa8.57□□□□□ -1.04
RTN3-201ENST00000338850 IGHV1-69-2A0A0G2JMI3 117 aa8.57□□□□□ -1.04
RTN3-201ENST00000338850 A0A1W2PS18 150 aa8.57□□□□□ -1.04
RTN3-201ENST00000338850 C19orf71A6NCJ1 209 aa8.57□□□□□ -1.04
RTN3-201ENST00000338850 A8MWL6 223 aa8.57□□□□□ -1.04
RTN3-201ENST00000338850 HYPMO75409 117 aa8.57□□□□□ -1.04
RTN3-201ENST00000338850 MGST1P10620 155 aaKnown RBP8.57□□□□□ -1.04
RTN3-201ENST00000338850 SRIP30626 198 aa8.57□□□□□ -1.04
RTN3-201ENST00000338850 AMTP48728 403 aa8.57□□□□□ -1.04
RTN3-201ENST00000338850 GAGE1Q13065 139 aa8.57□□□□□ -1.04
RTN3-201ENST00000338850 MMDQ15546 238 aa8.57□□□□□ -1.04
RTN3-201ENST00000338850 MORN5Q5VZ52 161 aa8.57□□□□□ -1.04
RTN3-201ENST00000338850 CLEC2AQ6UVW9 174 aa8.57□□□□□ -1.04
RTN3-201ENST00000338850 S100A7AQ86SG5 101 aa8.57□□□□□ -1.04
RTN3-201ENST00000338850 LYPD1Q8N2G4 141 aa8.57□□□□□ -1.04
RTN3-201ENST00000338850 KLHDC1Q8N7A1 406 aa8.57□□□□□ -1.04
RTN3-201ENST00000338850 NHLRC2Q8NBF2 726 aa8.57□□□□□ -1.04
RTN3-201ENST00000338850 NUDT10Q8NFP7 164 aa8.57□□□□□ -1.04
RTN3-201ENST00000338850 H1FXQ92522 213 aaKnown RBP8.57□□□□□ -1.04
RTN3-201ENST00000338850 NUDT11Q96G61 164 aa8.57□□□□□ -1.04
RTN3-201ENST00000338850 CLEC7AQ9BXN2 247 aa8.57□□□□□ -1.04
RTN3-201ENST00000338850 DYNLRB1Q9NP97 96 aa8.57□□□□□ -1.04
RTN3-201ENST00000338850 NRN1Q9NPD7 142 aa8.57□□□□□ -1.04
RTN3-201ENST00000338850 YAE1D1Q9NRH1 226 aa8.57□□□□□ -1.04
RTN3-201ENST00000338850 ZNRD1Q9P1U0 126 aa8.57□□□□□ -1.04
RTN3-201ENST00000338850 FBXL7Q9UJT9 491 aa8.57□□□□□ -1.04
RTN3-201ENST00000338850 SIGLEC9Q9Y336 463 aa8.57□□□□□ -1.04
RTN3-201ENST00000338850 TBL2Q9Y4P3 447 aaKnown RBP8.57□□□□□ -1.04
RTN3-201ENST00000338850 IGHV2-26A0A0B4J1V2 119 aa8.56□□□□□ -1.04
RTN3-201ENST00000338850 TRAV5A0A0B4J249 113 aa8.56□□□□□ -1.04
RTN3-201ENST00000338850 DIRC3C9JPN6 131 aa8.56□□□□□ -1.04
RTN3-201ENST00000338850 SLC25A17O43808 307 aa8.56□□□□□ -1.04
RTN3-201ENST00000338850 SNRPCP09234 159 aaKnown RBP8.56□□□□□ -1.04
RTN3-201ENST00000338850 NBEAP1P0C6P0 100 aa8.56□□□□□ -1.04
RTN3-201ENST00000338850 PYYP10082 97 aa8.56□□□□□ -1.04
RTN3-201ENST00000338850 PMCHP20382 165 aa8.56□□□□□ -1.04
RTN3-201ENST00000338850 FOXA3P55318 350 aaPredicted RBP8.56□□□□□ -1.04
RTN3-201ENST00000338850 DSCR9P59020 149 aa8.56□□□□□ -1.04
RTN3-201ENST00000338850 LOXL1Q08397 574 aaPredicted RBP8.56□□□□□ -1.04
RTN3-201ENST00000338850 MLANAQ16655 118 aa8.56□□□□□ -1.04
RTN3-201ENST00000338850 LYPD2Q6UXB3 125 aa8.56□□□□□ -1.04
RTN3-201ENST00000338850 NIT1Q86X76 327 aa8.56□□□□□ -1.04
RTN3-201ENST00000338850 NUP35Q8NFH5 326 aa8.56□□□□□ -1.04
RTN3-201ENST00000338850 RPP21Q9H633 154 aaKnown RBP8.56□□□□□ -1.04
RTN3-201ENST00000338850 IGHV1-3A0A0C4DH29 117 aa8.55□□□□□ -1.04
RTN3-201ENST00000338850 A0A1B0GW15 77 aa8.55□□□□□ -1.04
RTN3-201ENST00000338850 SERTM2A0A1B0GWG4 89 aa8.55□□□□□ -1.04
RTN3-201ENST00000338850 FBLL1A6NHQ2 334 aaKnown RBP8.55□□□□□ -1.04
RTN3-201ENST00000338850 TEX22C9J3V5 150 aa8.55□□□□□ -1.04
RTN3-201ENST00000338850 LY6LH3BQJ8 138 aa8.55□□□□□ -1.04
RTN3-201ENST00000338850 TCAPO15273 167 aa8.55□□□□□ -1.04
RTN3-201ENST00000338850 TCRAP04437 139 aa8.55□□□□□ -1.04
RTN3-201ENST00000338850 SLC25A5P05141 298 aaKnown RBP8.55□□□□□ -1.04
RTN3-201ENST00000338850 RPLP1P05386 114 aaKnown RBP8.55□□□□□ -1.04
RTN3-201ENST00000338850 SLC25A16P16260 332 aa8.55□□□□□ -1.04
RTN3-201ENST00000338850 EFNA4P52798 201 aa8.55□□□□□ -1.04
RTN3-201ENST00000338850 HBBP68871 147 aa8.55□□□□□ -1.04
RTN3-201ENST00000338850 SSBP2P81877 361 aaPredicted RBP8.55□□□□□ -1.04
RTN3-201ENST00000338850 FXYD3Q14802 87 aa8.55□□□□□ -1.04
RTN3-201ENST00000338850 C10orf55Q5SWW7 151 aa8.55□□□□□ -1.04
RTN3-201ENST00000338850 PPP1R27Q86WC6 154 aa8.55□□□□□ -1.04
RTN3-201ENST00000338850 SPATA3Q8NHX4 192 aa8.55□□□□□ -1.04
RTN3-201ENST00000338850 C10orf105Q8TEF2 133 aa8.55□□□□□ -1.04
RTN3-201ENST00000338850 CHCHD1Q96BP2 118 aaKnown RBP8.55□□□□□ -1.04
RTN3-201ENST00000338850 TMEM68Q96MH6 324 aa8.55□□□□□ -1.04
RTN3-201ENST00000338850 ALKBH7Q9BT30 221 aaPredicted RBP8.55□□□□□ -1.04
RTN3-201ENST00000338850 MRPL36Q9P0J6 103 aaKnown RBP8.55□□□□□ -1.04
RTN3-201ENST00000338850 UQCR10Q9UDW1 63 aa8.55□□□□□ -1.04
RTN3-201ENST00000338850 HIGD1AQ9Y241 93 aa8.55□□□□□ -1.04
RTN3-201ENST00000338850 MALRD1Q5VYJ5 2156 aa8.54□□□□□ -1.04
RTN3-201ENST00000338850 F2Z2F3 143 aa8.54□□□□□ -1.04
RTN3-201ENST00000338850 BUB1B-PAK6H3BSN5 160 aa8.54□□□□□ -1.04
RTN3-201ENST00000338850 CRXO43186 299 aaPredicted RBP8.54□□□□□ -1.04
RTN3-201ENST00000338850 LY6HO94772 140 aa8.54□□□□□ -1.04
RTN3-201ENST00000338850 IGLC1P0CG04 106 aa8.54□□□□□ -1.04
RTN3-201ENST00000338850 REG1BP48304 166 aa8.54□□□□□ -1.04
RTN3-201ENST00000338850 MFAP2P55001 183 aa8.54□□□□□ -1.04
RTN3-201ENST00000338850 SLAQ13239 276 aa8.54□□□□□ -1.04
RTN3-201ENST00000338850 DIAPH2-AS1Q14236 149 aa8.54□□□□□ -1.04
RTN3-201ENST00000338850 Q6AWC8 147 aa8.54□□□□□ -1.04
RTN3-201ENST00000338850 MRPL54Q6P161 138 aaKnown RBP8.54□□□□□ -1.04
RTN3-201ENST00000338850 ZNF841Q6ZN19 808 aa8.54□□□□□ -1.04
RTN3-201ENST00000338850 TMEM75Q8N9X5 138 aa8.54□□□□□ -1.04
RTN3-201ENST00000338850 LY6G5BQ8NDX9 201 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms