RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 HLA-DRB4X5D2U9 266 aa11.11□□□□□ -0.63
PRKN-201ENST00000338468 H0YIZ8 118 aa11.1□□□□□ -0.63
PRKN-201ENST00000338468 PVALBP20472 110 aaPredicted RBP11.1□□□□□ -0.63
PRKN-201ENST00000338468 GALR1P47211 349 aa11.1□□□□□ -0.63
PRKN-201ENST00000338468 SULT1A1P50225 295 aa11.1□□□□□ -0.63
PRKN-201ENST00000338468 H2BFSP57053 126 aa11.1□□□□□ -0.63
PRKN-201ENST00000338468 ZNF546Q86UE3 836 aa11.1□□□□□ -0.63
PRKN-201ENST00000338468 NMES1Q9C002 83 aa11.1□□□□□ -0.63
PRKN-201ENST00000338468 ARL6Q9H0F7 186 aa11.1□□□□□ -0.63
PRKN-201ENST00000338468 TRAV8-2A0A0B4J237 113 aa11.09□□□□□ -0.63
PRKN-201ENST00000338468 ISLRO14498 428 aa11.09□□□□□ -0.63
PRKN-201ENST00000338468 OR5G3P0C626 314 aa11.09□□□□□ -0.63
PRKN-201ENST00000338468 ATF4P18848 351 aaPredicted RBP11.09□□□□□ -0.63
PRKN-201ENST00000338468 ID1P41134 155 aa11.09□□□□□ -0.63
PRKN-201ENST00000338468 RAP2BP61225 183 aa11.09□□□□□ -0.63
PRKN-201ENST00000338468 ARV1Q9H2C2 271 aa11.09□□□□□ -0.63
PRKN-201ENST00000338468 SAV1Q9H4B6 383 aaPredicted RBP11.09□□□□□ -0.63
PRKN-201ENST00000338468 CLEC5AQ9NY25 188 aa11.09□□□□□ -0.63
PRKN-201ENST00000338468 OR5AC2Q9NZP5 309 aa11.09□□□□□ -0.63
PRKN-201ENST00000338468 WDR83OSQ9Y284 106 aa11.09□□□□□ -0.63
PRKN-201ENST00000338468 ALMS1Q8TCU4 4167 aa11.09□□□□□ -0.63
PRKN-201ENST00000338468 F6UB75 175 aa11.08□□□□□ -0.64
PRKN-201ENST00000338468 MRPS12O15235 138 aaKnown RBP11.08□□□□□ -0.64
PRKN-201ENST00000338468 S100A11P31949 105 aa11.08□□□□□ -0.64
PRKN-201ENST00000338468 MEOX2P50222 304 aa11.08□□□□□ -0.64
PRKN-201ENST00000338468 FOXI2Q6ZQN5 318 aa11.08□□□□□ -0.64
PRKN-201ENST00000338468 TMEM37Q8WXS4 190 aa11.08□□□□□ -0.64
PRKN-201ENST00000338468 GPR82Q96P67 336 aa11.08□□□□□ -0.64
PRKN-201ENST00000338468 UQCC1Q9NVA1 299 aa11.08□□□□□ -0.64
PRKN-201ENST00000338468 ZNF705EA8MWA4 302 aaPredicted RBP11.07□□□□□ -0.64
PRKN-201ENST00000338468 S100A7P31151 101 aa11.07□□□□□ -0.64
PRKN-201ENST00000338468 CAMLGP49069 296 aa11.07□□□□□ -0.64
PRKN-201ENST00000338468 PRR20EP86478 221 aa11.07□□□□□ -0.64
PRKN-201ENST00000338468 PRR20CP86479 221 aa11.07□□□□□ -0.64
PRKN-201ENST00000338468 PRR20DP86480 221 aa11.07□□□□□ -0.64
PRKN-201ENST00000338468 PRR20BP86481 221 aa11.07□□□□□ -0.64
PRKN-201ENST00000338468 PRR20AP86496 221 aa11.07□□□□□ -0.64
PRKN-201ENST00000338468 LRRC37A5PQ49AS3 106 aa11.07□□□□□ -0.64
PRKN-201ENST00000338468 TMEM41BQ5BJD5 291 aa11.07□□□□□ -0.64
PRKN-201ENST00000338468 PXDC1Q5TGL8 231 aa11.07□□□□□ -0.64
PRKN-201ENST00000338468 MORN5Q5VZ52 161 aa11.07□□□□□ -0.64
PRKN-201ENST00000338468 MIC13Q5XKP0 118 aa11.07□□□□□ -0.64
PRKN-201ENST00000338468 IGFL4Q6B9Z1 124 aa11.07□□□□□ -0.64
PRKN-201ENST00000338468 Q8NAQ8 132 aa11.07□□□□□ -0.64
PRKN-201ENST00000338468 C16orf92Q96LL3 132 aa11.07□□□□□ -0.64
PRKN-201ENST00000338468 C11orf68Q9H3H3 251 aaKnown RBP11.07□□□□□ -0.64
PRKN-201ENST00000338468 X6R8D5 127 aa11.07□□□□□ -0.64
PRKN-201ENST00000338468 UBE2L5PA0A1B0GUS4 154 aa11.06□□□□□ -0.64
PRKN-201ENST00000338468 DEFB4AO15263 64 aa11.06□□□□□ -0.64
PRKN-201ENST00000338468 IGKV3-20P01619 116 aa11.06□□□□□ -0.64
PRKN-201ENST00000338468 RPL7P18124 248 aaKnown RBP11.06□□□□□ -0.64
PRKN-201ENST00000338468 NHLH2Q02577 135 aa11.06□□□□□ -0.64
PRKN-201ENST00000338468 SAMD13Q5VXD3 122 aa11.06□□□□□ -0.64
PRKN-201ENST00000338468 STX12Q86Y82 276 aa11.06□□□□□ -0.64
PRKN-201ENST00000338468 ZNF709Q8N972 641 aa11.06□□□□□ -0.64
PRKN-201ENST00000338468 CLUHP3Q96NS8 147 aa11.06□□□□□ -0.64
PRKN-201ENST00000338468 RNF126Q9BV68 326 aa11.06□□□□□ -0.64
PRKN-201ENST00000338468 XCL2Q9UBD3 114 aa11.06□□□□□ -0.64
PRKN-201ENST00000338468 A0A087X0K7 114 aa11.05□□□□□ -0.64
PRKN-201ENST00000338468 A0A0J9YX75 114 aa11.05□□□□□ -0.64
PRKN-201ENST00000338468 A8MTW9 85 aa11.05□□□□□ -0.64
PRKN-201ENST00000338468 E5RGE8 158 aa11.05□□□□□ -0.64
PRKN-201ENST00000338468 SSNA1O43805 119 aa11.05□□□□□ -0.64
PRKN-201ENST00000338468 RBMY1A1P0DJD3 496 aaKnown RBP11.05□□□□□ -0.64
PRKN-201ENST00000338468 RBMY1CP0DJD4 496 aa11.05□□□□□ -0.64
PRKN-201ENST00000338468 HBG1P69891 147 aa11.05□□□□□ -0.64
PRKN-201ENST00000338468 HBG2P69892 147 aa11.05□□□□□ -0.64
PRKN-201ENST00000338468 CYCSP99999 105 aaKnown RBP11.05□□□□□ -0.64
PRKN-201ENST00000338468 PMS2P11Q13670 270 aa11.05□□□□□ -0.64
PRKN-201ENST00000338468 OPCMLQ14982 345 aa11.05□□□□□ -0.64
PRKN-201ENST00000338468 RBMY1FQ15415 496 aaKnown RBP11.05□□□□□ -0.64
PRKN-201ENST00000338468 LINC00305Q7Z4B0 112 aa11.05□□□□□ -0.64
PRKN-201ENST00000338468 RNF182Q8N6D2 247 aa11.05□□□□□ -0.64
PRKN-201ENST00000338468 CHAC2Q8WUX2 184 aa11.05□□□□□ -0.64
PRKN-201ENST00000338468 PPP1R1CQ8WVI7 109 aa11.05□□□□□ -0.64
PRKN-201ENST00000338468 IGHV4-28A0A0C4DH34 117 aa11.04□□□□□ -0.64
PRKN-201ENST00000338468 COX7A2P2O60397 106 aa11.04□□□□□ -0.64
PRKN-201ENST00000338468 RPL29P47914 159 aaKnown RBP11.04□□□□□ -0.64
PRKN-201ENST00000338468 FXYD7P58549 80 aa11.04□□□□□ -0.64
PRKN-201ENST00000338468 BAXQ07812 192 aa11.04□□□□□ -0.64
PRKN-201ENST00000338468 RAB31Q13636 194 aa11.04□□□□□ -0.64
PRKN-201ENST00000338468 ATP6V1FQ16864 119 aa11.04□□□□□ -0.64
PRKN-201ENST00000338468 FAM78BQ5VT40 261 aa11.04□□□□□ -0.64
PRKN-201ENST00000338468 RPRMQ9NS64 109 aa11.04□□□□□ -0.64
PRKN-201ENST00000338468 ALG5Q9Y673 324 aa11.04□□□□□ -0.64
PRKN-201ENST00000338468 ELOA3CA0A087WX78 387 aaPredicted RBP11.03□□□□□ -0.64
PRKN-201ENST00000338468 CXorf65A6NEN9 183 aa11.03□□□□□ -0.64
PRKN-201ENST00000338468 PTTG1O95997 202 aa11.03□□□□□ -0.64
PRKN-201ENST00000338468 RLN2P04090 185 aa11.03□□□□□ -0.64
PRKN-201ENST00000338468 HLA-DMBP28068 263 aa11.03□□□□□ -0.64
PRKN-201ENST00000338468 NUTF2P61970 127 aaKnown RBP11.03□□□□□ -0.64
PRKN-201ENST00000338468 FGL1Q08830 312 aa11.03□□□□□ -0.64
PRKN-201ENST00000338468 C10orf113Q5VZT2 155 aa11.03□□□□□ -0.64
PRKN-201ENST00000338468 SPATA31B1PQ5VZV4 182 aa11.03□□□□□ -0.64
PRKN-201ENST00000338468 AMTNQ6UX39 209 aa11.03□□□□□ -0.64
PRKN-201ENST00000338468 S100A7AQ86SG5 101 aa11.03□□□□□ -0.64
PRKN-201ENST00000338468 OR4B1Q8NGF8 309 aa11.03□□□□□ -0.64
PRKN-201ENST00000338468 OR5C1Q8NGR4 320 aa11.03□□□□□ -0.64
PRKN-201ENST00000338468 SLC35B3Q9H1N7 401 aa11.03□□□□□ -0.64
PRKN-201ENST00000338468 DNAJC4Q9NNZ3 241 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms