RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 OR4F4Q96R69 305 aa11.32□□□□□ -0.6
CDK5RAP3-201ENST00000338399 SLC35B3Q9H1N7 401 aa11.32□□□□□ -0.6
CDK5RAP3-201ENST00000338399 C11orf94C9JXX5 98 aa11.32□□□□□ -0.6
CDK5RAP3-201ENST00000338399 ADCYAP1P18509 176 aa11.32□□□□□ -0.6
CDK5RAP3-201ENST00000338399 CEBPGP53567 150 aa11.32□□□□□ -0.6
CDK5RAP3-201ENST00000338399 BPIFA4PQ86YQ2 179 aa11.32□□□□□ -0.6
CDK5RAP3-201ENST00000338399 C11orf44Q8N8P7 122 aa11.32□□□□□ -0.6
CDK5RAP3-201ENST00000338399 BLNKQ8WV28 456 aa11.32□□□□□ -0.6
CDK5RAP3-201ENST00000338399 METTL26Q96S19 204 aa11.32□□□□□ -0.6
CDK5RAP3-201ENST00000338399 TMEM14CQ9P0S9 112 aa11.32□□□□□ -0.6
CDK5RAP3-201ENST00000338399 IGHV3OR16-13A0A075B7E8 117 aa11.31□□□□□ -0.6
CDK5RAP3-201ENST00000338399 IGHV3-74A0A0B4J1X5 117 aa11.31□□□□□ -0.6
CDK5RAP3-201ENST00000338399 ZNF320A2RRD8 509 aa11.31□□□□□ -0.6
CDK5RAP3-201ENST00000338399 F8W036 122 aa11.31□□□□□ -0.6
CDK5RAP3-201ENST00000338399 NPPCP23582 126 aa11.31□□□□□ -0.6
CDK5RAP3-201ENST00000338399 S100A7P31151 101 aa11.31□□□□□ -0.6
CDK5RAP3-201ENST00000338399 CDX1P47902 265 aaPredicted RBP11.31□□□□□ -0.6
CDK5RAP3-201ENST00000338399 RPEL1Q2QD12 228 aa11.31□□□□□ -0.6
CDK5RAP3-201ENST00000338399 CYB561D1Q8N8Q1 229 aa11.31□□□□□ -0.6
CDK5RAP3-201ENST00000338399 RNF114Q9Y508 228 aa11.31□□□□□ -0.6
CDK5RAP3-201ENST00000338399 IGHV4OR15-8A0A075B7B6 117 aa11.3□□□□□ -0.6
CDK5RAP3-201ENST00000338399 A0A087WW49 117 aa11.3□□□□□ -0.6
CDK5RAP3-201ENST00000338399 IGHV3-49A0A0A0MS15 119 aa11.3□□□□□ -0.6
CDK5RAP3-201ENST00000338399 IGHV3-66A0A0C4DH42 116 aa11.3□□□□□ -0.6
CDK5RAP3-201ENST00000338399 H3BTX0 84 aa11.3□□□□□ -0.6
CDK5RAP3-201ENST00000338399 APOHP02749 345 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-201ENST00000338399 NBEAP1P0C6P0 100 aa11.3□□□□□ -0.6
CDK5RAP3-201ENST00000338399 CD28P10747 220 aa11.3□□□□□ -0.6
CDK5RAP3-201ENST00000338399 CRYBB3P26998 211 aa11.3□□□□□ -0.6
CDK5RAP3-201ENST00000338399 H3BQ15 152 aa11.29□□□□□ -0.6
CDK5RAP3-201ENST00000338399 TSPAN4O14817 238 aa11.29□□□□□ -0.6
CDK5RAP3-201ENST00000338399 MRPS12O15235 138 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-201ENST00000338399 BUB3O43684 328 aa11.29□□□□□ -0.6
CDK5RAP3-201ENST00000338399 HIST1H1EP10412 219 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-201ENST00000338399 DEFB136Q30KP8 78 aa11.29□□□□□ -0.6
CDK5RAP3-201ENST00000338399 FAM106AQ4KMX7 169 aa11.29□□□□□ -0.6
CDK5RAP3-201ENST00000338399 GPHB5Q86YW7 130 aa11.29□□□□□ -0.6
CDK5RAP3-201ENST00000338399 OR8I2Q8N0Y5 310 aa11.29□□□□□ -0.6
CDK5RAP3-201ENST00000338399 TMEM190Q8WZ59 177 aa11.29□□□□□ -0.6
CDK5RAP3-201ENST00000338399 SEC11CQ9BY50 192 aa11.29□□□□□ -0.6
CDK5RAP3-201ENST00000338399 ZNF586Q9NXT0 402 aa11.29□□□□□ -0.6
CDK5RAP3-201ENST00000338399 A0A1W2PRE2 83 aa11.29□□□□□ -0.6
CDK5RAP3-201ENST00000338399 KLHL30-AS1Q8NEE0 82 aa11.29□□□□□ -0.6
CDK5RAP3-201ENST00000338399 OR4F17Q8NGA8 305 aa11.29□□□□□ -0.6
CDK5RAP3-201ENST00000338399 C4orf3Q8WVX3 66 aa11.29□□□□□ -0.6
CDK5RAP3-201ENST00000338399 TXNDC17Q9BRA2 123 aa11.29□□□□□ -0.6
CDK5RAP3-201ENST00000338399 RNF24Q9Y225 148 aa11.29□□□□□ -0.6
CDK5RAP3-201ENST00000338399 U3KQE9 123 aa11.29□□□□□ -0.6
CDK5RAP3-201ENST00000338399 ARL2-SNX15V9GYD0 113 aa11.29□□□□□ -0.6
CDK5RAP3-201ENST00000338399 APOC3P02656 99 aa11.28□□□□□ -0.6
CDK5RAP3-201ENST00000338399 IGLC2P0DOY2 106 aa11.28□□□□□ -0.6
CDK5RAP3-201ENST00000338399 RPL7P18124 248 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-201ENST00000338399 RANP62826 216 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-201ENST00000338399 SUMO1P63165 101 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-201ENST00000338399 SOHLH1Q5JUK2 328 aa11.28□□□□□ -0.6
CDK5RAP3-201ENST00000338399 GGTLC3B5MD39 225 aa11.27□□□□□ -0.6
CDK5RAP3-201ENST00000338399 PROK1P58294 105 aa11.27□□□□□ -0.6
CDK5RAP3-201ENST00000338399 BTN1A1Q13410 526 aa11.27□□□□□ -0.6
CDK5RAP3-201ENST00000338399 TM4SF20Q53R12 229 aa11.27□□□□□ -0.6
CDK5RAP3-201ENST00000338399 C10orf91Q5T1B1 145 aa11.27□□□□□ -0.6
CDK5RAP3-201ENST00000338399 C17orf77Q96MU5 243 aa11.27□□□□□ -0.6
CDK5RAP3-201ENST00000338399 CITED2Q99967 270 aaPredicted RBP11.27□□□□□ -0.6
CDK5RAP3-201ENST00000338399 PDE6DO43924 150 aa11.27□□□□□ -0.61
CDK5RAP3-201ENST00000338399 HOXD3P31249 432 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-201ENST00000338399 FAM90A2PQ658T7 463 aa11.27□□□□□ -0.61
CDK5RAP3-201ENST00000338399 OR11H1Q8NG94 326 aa11.27□□□□□ -0.61
CDK5RAP3-201ENST00000338399 SMAD5-AS1Q9Y6J3 95 aa11.27□□□□□ -0.61
CDK5RAP3-201ENST00000338399 SCO2A0A1W2PP80 73 aa11.26□□□□□ -0.61
CDK5RAP3-201ENST00000338399 A0A1W2PRX2 142 aa11.26□□□□□ -0.61
CDK5RAP3-201ENST00000338399 TMEM250H0YL14 139 aa11.26□□□□□ -0.61
CDK5RAP3-201ENST00000338399 C8orf86Q6ZUL3 223 aa11.26□□□□□ -0.61
CDK5RAP3-201ENST00000338399 DUX3Q96PT4 197 aa11.26□□□□□ -0.61
CDK5RAP3-201ENST00000338399 DAZ1Q9NQZ3 744 aaKnown RBP11.26□□□□□ -0.61
CDK5RAP3-201ENST00000338399 CARHSP1Q9Y2V2 147 aaKnown RBP11.26□□□□□ -0.61
CDK5RAP3-201ENST00000338399 TRBV19A0A075B6N1 114 aa11.25□□□□□ -0.61
CDK5RAP3-201ENST00000338399 F6UZH7 168 aa11.25□□□□□ -0.61
CDK5RAP3-201ENST00000338399 LINC01619G3V211 115 aa11.25□□□□□ -0.61
CDK5RAP3-201ENST00000338399 NDUFS6O75380 124 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-201ENST00000338399 SYNJ2BPP57105 145 aa11.25□□□□□ -0.61
CDK5RAP3-201ENST00000338399 GUCA2BQ16661 112 aa11.25□□□□□ -0.61
CDK5RAP3-201ENST00000338399 C1orf194Q5T5A4 169 aa11.25□□□□□ -0.61
CDK5RAP3-201ENST00000338399 OR1N2Q8NGR9 330 aa11.25□□□□□ -0.61
CDK5RAP3-201ENST00000338399 WFDC12Q8WWY7 111 aa11.25□□□□□ -0.61
CDK5RAP3-201ENST00000338399 DPF1Q92782 380 aa11.25□□□□□ -0.61
CDK5RAP3-201ENST00000338399 RPUSD4Q96CM3 377 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-201ENST00000338399 ELOVL1Q9BW60 279 aa11.25□□□□□ -0.61
CDK5RAP3-201ENST00000338399 NKX6-2Q9C056 277 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP3-201ENST00000338399 PGPA6NDG6 321 aa11.25□□□□□ -0.61
CDK5RAP3-201ENST00000338399 K7EMT4 169 aa11.25□□□□□ -0.61
CDK5RAP3-201ENST00000338399 NDUFB4O95168 129 aa11.25□□□□□ -0.61
CDK5RAP3-201ENST00000338399 EDN2P20800 178 aa11.25□□□□□ -0.61
CDK5RAP3-201ENST00000338399 MYCNOSP40205 109 aa11.25□□□□□ -0.61
CDK5RAP3-201ENST00000338399 SLURP1P55000 103 aa11.25□□□□□ -0.61
CDK5RAP3-201ENST00000338399 ZNF674Q2M3X9 581 aa11.25□□□□□ -0.61
CDK5RAP3-201ENST00000338399 C16orf54Q6UWD8 224 aa11.25□□□□□ -0.61
CDK5RAP3-201ENST00000338399 GPR82Q96P67 336 aa11.25□□□□□ -0.61
CDK5RAP3-201ENST00000338399 Q9H3A6 140 aa11.25□□□□□ -0.61
CDK5RAP3-201ENST00000338399 UFC1Q9Y3C8 167 aa11.25□□□□□ -0.61
CDK5RAP3-201ENST00000338399 TSSC4Q9Y5U2 329 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP3-201ENST00000338399 IGHV7-4-1A0A0J9YVY3 117 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms