RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 OR4D5Q8NGN0 318 aa7.64□□□□□ -1.19
CAPN3-202ENST00000337571 OR1B1Q8NGR6 318 aa7.64□□□□□ -1.19
CAPN3-202ENST00000337571 NIPSNAP3BQ9BS92 247 aa7.64□□□□□ -1.19
CAPN3-202ENST00000337571 SLC35B3Q9H1N7 401 aa7.64□□□□□ -1.19
CAPN3-202ENST00000337571 IGKV1OR2-108A0A075B7D4 117 aa7.63□□□□□ -1.19
CAPN3-202ENST00000337571 A0A0J9YX75 114 aa7.63□□□□□ -1.19
CAPN3-202ENST00000337571 SMCO3A2RU48 225 aa7.63□□□□□ -1.19
CAPN3-202ENST00000337571 ZNF98A6NK75 572 aa7.63□□□□□ -1.19
CAPN3-202ENST00000337571 F6UB75 175 aa7.63□□□□□ -1.19
CAPN3-202ENST00000337571 SOCS3O14543 225 aa7.63□□□□□ -1.19
CAPN3-202ENST00000337571 UPK1BO75841 260 aa7.63□□□□□ -1.19
CAPN3-202ENST00000337571 DUSP14O95147 198 aaKnown RBP7.63□□□□□ -1.19
CAPN3-202ENST00000337571 HTN3P15516 51 aa7.63□□□□□ -1.19
CAPN3-202ENST00000337571 PAX9P55771 341 aa7.63□□□□□ -1.19
CAPN3-202ENST00000337571 FGL1Q08830 312 aa7.63□□□□□ -1.19
CAPN3-202ENST00000337571 RRN3P1Q2M238 152 aa7.63□□□□□ -1.19
CAPN3-202ENST00000337571 SPANXN2Q5MJ10 180 aa7.63□□□□□ -1.19
CAPN3-202ENST00000337571 FAM222AQ5U5X8 452 aa7.63□□□□□ -1.19
CAPN3-202ENST00000337571 S100A7AQ86SG5 101 aa7.63□□□□□ -1.19
CAPN3-202ENST00000337571 TRIM63Q969Q1 353 aa7.63□□□□□ -1.19
CAPN3-202ENST00000337571 FAM210BQ96KR6 192 aa7.63□□□□□ -1.19
CAPN3-202ENST00000337571 DOK5Q9P104 306 aa7.63□□□□□ -1.19
CAPN3-202ENST00000337571 DKK2Q9UBU2 259 aa7.63□□□□□ -1.19
CAPN3-202ENST00000337571 DNAH10Q8IVF4 4471 aa7.62□□□□□ -1.19
CAPN3-202ENST00000337571 LOC102723971A0A1B0GUV8 181 aa7.62□□□□□ -1.19
CAPN3-202ENST00000337571 H3BP45 60 aa7.62□□□□□ -1.19
CAPN3-202ENST00000337571 M0R2N4 97 aa7.62□□□□□ -1.19
CAPN3-202ENST00000337571 IL5P05113 134 aa7.62□□□□□ -1.19
CAPN3-202ENST00000337571 GATA2P23769 480 aaPredicted RBP7.62□□□□□ -1.19
CAPN3-202ENST00000337571 UBE2MP61081 183 aaKnown RBP7.62□□□□□ -1.19
CAPN3-202ENST00000337571 RAP2BP61225 183 aa7.62□□□□□ -1.19
CAPN3-202ENST00000337571 Q6ZNX1 250 aa7.62□□□□□ -1.19
CAPN3-202ENST00000337571 Q8N3U1 123 aa7.62□□□□□ -1.19
CAPN3-202ENST00000337571 ZNF709Q8N972 641 aa7.62□□□□□ -1.19
CAPN3-202ENST00000337571 SLC25A32Q9H2D1 315 aa7.62□□□□□ -1.19
CAPN3-202ENST00000337571 PPP1R14DQ9NXH3 145 aa7.62□□□□□ -1.19
CAPN3-202ENST00000337571 NAP1L6A6NFF2 107 aa7.61□□□□□ -1.19
CAPN3-202ENST00000337571 PLA2G10O15496 165 aa7.61□□□□□ -1.19
CAPN3-202ENST00000337571 HYPMO75409 117 aa7.61□□□□□ -1.19
CAPN3-202ENST00000337571 B2MP61769 119 aa7.61□□□□□ -1.19
CAPN3-202ENST00000337571 ID3Q02535 119 aa7.61□□□□□ -1.19
CAPN3-202ENST00000337571 OXA1LQ15070 435 aa7.61□□□□□ -1.19
CAPN3-202ENST00000337571 GSG1LQ6UXU4 331 aa7.61□□□□□ -1.19
CAPN3-202ENST00000337571 C1orf158Q8N1D5 194 aa7.61□□□□□ -1.19
CAPN3-202ENST00000337571 LRRC20Q8TCA0 184 aa7.61□□□□□ -1.19
CAPN3-202ENST00000337571 IGF2BP2-AS1Q96M15 143 aa7.61□□□□□ -1.19
CAPN3-202ENST00000337571 SCRT1Q9BWW7 348 aa7.61□□□□□ -1.19
CAPN3-202ENST00000337571 PSENENQ9NZ42 101 aa7.61□□□□□ -1.19
CAPN3-202ENST00000337571 RNF24Q9Y225 148 aa7.61□□□□□ -1.19
CAPN3-202ENST00000337571 YTHDF2Q9Y5A9 579 aaKnown RBP7.61□□□□□ -1.19
CAPN3-202ENST00000337571 C9orf170A2RU37 121 aa7.6□□□□□ -1.19
CAPN3-202ENST00000337571 CENPXA8MT69 81 aa7.6□□□□□ -1.19
CAPN3-202ENST00000337571 OR5G3P0C626 314 aa7.6□□□□□ -1.19
CAPN3-202ENST00000337571 IL7P13232 177 aa7.6□□□□□ -1.19
CAPN3-202ENST00000337571 RPL7P18124 248 aaKnown RBP7.6□□□□□ -1.19
CAPN3-202ENST00000337571 ANXA7P20073 488 aaKnown RBP7.6□□□□□ -1.19
CAPN3-202ENST00000337571 DAD1P61803 113 aa7.6□□□□□ -1.19
CAPN3-202ENST00000337571 SELENOTP62341 195 aa7.6□□□□□ -1.19
CAPN3-202ENST00000337571 POLR2GP62487 172 aaKnown RBP eCLIP7.6□□□□□ -1.19
CAPN3-202ENST00000337571 TRIQKQ629K1 86 aa7.6□□□□□ -1.19
CAPN3-202ENST00000337571 TMEM182Q6ZP80 229 aaPredicted RBP7.6□□□□□ -1.19
CAPN3-202ENST00000337571 CYP2G1PQ6ZSU1 146 aa7.6□□□□□ -1.19
CAPN3-202ENST00000337571 ACOT7LQ6ZUV0 252 aa7.6□□□□□ -1.19
CAPN3-202ENST00000337571 TMEM144Q7Z5S9 345 aa7.6□□□□□ -1.19
CAPN3-202ENST00000337571 ZNF738Q8NE65 137 aa7.6□□□□□ -1.19
CAPN3-202ENST00000337571 C20orf173Q96LM9 149 aa7.6□□□□□ -1.19
CAPN3-202ENST00000337571 CCDC32Q9BV29 185 aa7.6□□□□□ -1.19
CAPN3-202ENST00000337571 NPVFQ9HCQ7 196 aa7.6□□□□□ -1.19
CAPN3-202ENST00000337571 HIGD1AQ9Y241 93 aa7.6□□□□□ -1.19
CAPN3-202ENST00000337571 HECTD4Q9Y4D8 3996 aa7.6□□□□□ -1.19
CAPN3-202ENST00000337571 PRSS29PA6NIE9 313 aa7.59□□□□□ -1.19
CAPN3-202ENST00000337571 PRSS46E5RG02 174 aa7.59□□□□□ -1.19
CAPN3-202ENST00000337571 SSSCA1O60232 199 aa7.59□□□□□ -1.19
CAPN3-202ENST00000337571 ADAP1O75689 374 aa7.59□□□□□ -1.19
CAPN3-202ENST00000337571 INSP01308 110 aa7.59□□□□□ -1.19
CAPN3-202ENST00000337571 CNN1P51911 297 aaKnown RBP7.59□□□□□ -1.19
CAPN3-202ENST00000337571 RHOBP62745 196 aa7.59□□□□□ -1.19
CAPN3-202ENST00000337571 LGALS9BQ3B8N2 356 aa7.59□□□□□ -1.19
CAPN3-202ENST00000337571 RNF212Q495C1 297 aa7.59□□□□□ -1.19
CAPN3-202ENST00000337571 C4orf46Q504U0 113 aa7.59□□□□□ -1.19
CAPN3-202ENST00000337571 SOHLH1Q5JUK2 328 aa7.59□□□□□ -1.19
CAPN3-202ENST00000337571 IGFL4Q6B9Z1 124 aa7.59□□□□□ -1.19
CAPN3-202ENST00000337571 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.59□□□□□ -1.19
CAPN3-202ENST00000337571 SMIM8Q96KF7 97 aa7.59□□□□□ -1.19
CAPN3-202ENST00000337571 SLC25A39Q9BZJ4 359 aaPredicted RBP7.59□□□□□ -1.19
CAPN3-202ENST00000337571 MGAT4CQ9UBM8 478 aa7.59□□□□□ -1.19
CAPN3-202ENST00000337571 DNAH6Q9C0G6 4158 aa7.59□□□□□ -1.19
CAPN3-202ENST00000337571 LINC00854A0A1B0GVQ3 168 aa7.58□□□□□ -1.2
CAPN3-202ENST00000337571 SCO2A0A1W2PP80 73 aa7.58□□□□□ -1.2
CAPN3-202ENST00000337571 NDUFB6O95139 128 aa7.58□□□□□ -1.2
CAPN3-202ENST00000337571 SCGB1D2O95969 90 aa7.58□□□□□ -1.2
CAPN3-202ENST00000337571 OR4E1P0C645 316 aa7.58□□□□□ -1.2
CAPN3-202ENST00000337571 LINC00869P0C866 280 aa7.58□□□□□ -1.2
CAPN3-202ENST00000337571 RRAS2P62070 204 aaPredicted RBP7.58□□□□□ -1.2
CAPN3-202ENST00000337571 SPINK13Q1W4C9 94 aa7.58□□□□□ -1.2
CAPN3-202ENST00000337571 RNF182Q8N6D2 247 aa7.58□□□□□ -1.2
CAPN3-202ENST00000337571 OR11H7Q8NGC8 314 aa7.58□□□□□ -1.2
CAPN3-202ENST00000337571 OR10P1Q8NGE3 313 aa7.58□□□□□ -1.2
CAPN3-202ENST00000337571 SHANK2-AS3Q9BTD1 123 aa7.58□□□□□ -1.2
CAPN3-202ENST00000337571 ARL6Q9H0F7 186 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms