RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 KIR2DL5BA0A0G2JN68 375 aa11.73□□□□□ -0.53
UBA1-201ENST00000335972 KIR2DL5BA0A0G2JPC4 375 aa11.73□□□□□ -0.53
UBA1-201ENST00000335972 KIR2DL5AQ8N109 375 aa11.73□□□□□ -0.53
UBA1-201ENST00000335972 Q8N976 141 aa11.73□□□□□ -0.53
UBA1-201ENST00000335972 C5orf17Q8NAS9 161 aa11.73□□□□□ -0.53
UBA1-201ENST00000335972 DAZAP1Q96EP5 407 aaKnown RBP11.73□□□□□ -0.53
UBA1-201ENST00000335972 DPM3Q9P2X0 92 aa11.73□□□□□ -0.53
UBA1-201ENST00000335972 NDPQ00604 133 aa11.73□□□□□ -0.53
UBA1-201ENST00000335972 TNFRSF14Q92956 283 aa11.73□□□□□ -0.53
UBA1-201ENST00000335972 CLEC5AQ9NY25 188 aa11.73□□□□□ -0.53
UBA1-201ENST00000335972 LOC105371242A0A075B767 164 aa11.73□□□□□ -0.53
UBA1-201ENST00000335972 NBR2O15453 112 aa11.73□□□□□ -0.53
UBA1-201ENST00000335972 ESDP10768 282 aa11.73□□□□□ -0.53
UBA1-201ENST00000335972 STXBP6Q8NFX7 210 aa11.73□□□□□ -0.53
UBA1-201ENST00000335972 RAB1BQ9H0U4 201 aa11.73□□□□□ -0.53
UBA1-201ENST00000335972 RPP21Q9H633 154 aaKnown RBP11.73□□□□□ -0.53
UBA1-201ENST00000335972 LPAR2Q9HBW0 351 aa11.73□□□□□ -0.53
UBA1-201ENST00000335972 TMSB15BA0A087X1C1 80 aa11.72□□□□□ -0.53
UBA1-201ENST00000335972 TEX43Q6ZNM6 134 aa11.72□□□□□ -0.53
UBA1-201ENST00000335972 HSBP1O75506 76 aa11.72□□□□□ -0.53
UBA1-201ENST00000335972 COL8A1P27658 744 aa11.72□□□□□ -0.53
UBA1-201ENST00000335972 C2orf88Q9BSF0 95 aa11.72□□□□□ -0.53
UBA1-201ENST00000335972 MCRIP2Q9BUT9 160 aaKnown RBP11.72□□□□□ -0.53
UBA1-201ENST00000335972 ZFP36P26651 326 aaKnown RBP11.72□□□□□ -0.53
UBA1-201ENST00000335972 TP73-AS1Q9UF72 201 aa11.72□□□□□ -0.53
UBA1-201ENST00000335972 OR10J3Q5JRS4 329 aa11.71□□□□□ -0.53
UBA1-201ENST00000335972 FAM231DQ6ZW35 169 aa11.71□□□□□ -0.53
UBA1-201ENST00000335972 MLST8Q9BVC4 326 aa11.71□□□□□ -0.53
UBA1-201ENST00000335972 TCAPO15273 167 aa11.71□□□□□ -0.54
UBA1-201ENST00000335972 CSN3P07498 182 aa11.71□□□□□ -0.54
UBA1-201ENST00000335972 Q56UQ5 140 aa11.71□□□□□ -0.54
UBA1-201ENST00000335972 TIMD4Q96H15 378 aa11.71□□□□□ -0.54
UBA1-201ENST00000335972 COL25A1Q9BXS0 654 aaPredicted RBP11.71□□□□□ -0.54
UBA1-201ENST00000335972 H0Y8G0 127 aa11.71□□□□□ -0.54
UBA1-201ENST00000335972 M0R2Z0 102 aa11.71□□□□□ -0.54
UBA1-201ENST00000335972 TOMM40O96008 361 aa11.71□□□□□ -0.54
UBA1-201ENST00000335972 SSX8Q7RTT4 187 aa11.71□□□□□ -0.54
UBA1-201ENST00000335972 CFHR4Q92496 578 aa11.71□□□□□ -0.54
UBA1-201ENST00000335972 M0R143 59 aa11.7□□□□□ -0.54
UBA1-201ENST00000335972 GNG7O60262 68 aa11.7□□□□□ -0.54
UBA1-201ENST00000335972 OR2J3O76001 311 aa11.7□□□□□ -0.54
UBA1-201ENST00000335972 Q86TA4 180 aa11.7□□□□□ -0.54
UBA1-201ENST00000335972 ALKBH7Q9BT30 221 aaPredicted RBP11.7□□□□□ -0.54
UBA1-201ENST00000335972 LTAP01374 205 aa11.7□□□□□ -0.54
UBA1-201ENST00000335972 SPATA45Q537H7 98 aa11.7□□□□□ -0.54
UBA1-201ENST00000335972 LINC00173Q6ZV60 143 aa11.7□□□□□ -0.54
UBA1-201ENST00000335972 VMO1Q7Z5L0 202 aa11.7□□□□□ -0.54
UBA1-201ENST00000335972 BORCS7Q96B45 105 aa11.7□□□□□ -0.54
UBA1-201ENST00000335972 OR2T8A6NH00 312 aa11.69□□□□□ -0.54
UBA1-201ENST00000335972 TFPI2P48307 235 aa11.69□□□□□ -0.54
UBA1-201ENST00000335972 PVRIGQ6DKI7 326 aa11.69□□□□□ -0.54
UBA1-201ENST00000335972 ZNF491Q8N8L2 437 aa11.69□□□□□ -0.54
UBA1-201ENST00000335972 RNF125Q96EQ8 232 aa11.69□□□□□ -0.54
UBA1-201ENST00000335972 KLF12Q9Y4X4 402 aa11.69□□□□□ -0.54
UBA1-201ENST00000335972 ZC2HC1AQ96GY0 325 aa11.69□□□□□ -0.54
UBA1-201ENST00000335972 MSRB2Q9Y3D2 182 aa11.69□□□□□ -0.54
UBA1-201ENST00000335972 IGHV3OR16-13A0A075B7E8 117 aa11.69□□□□□ -0.54
UBA1-201ENST00000335972 IGHV3-74A0A0B4J1X5 117 aa11.69□□□□□ -0.54
UBA1-201ENST00000335972 IGLV2-11P01706 119 aa11.69□□□□□ -0.54
UBA1-201ENST00000335972 FAM120AOSQ5T036 256 aa11.69□□□□□ -0.54
UBA1-201ENST00000335972 EBLN2Q6P2I7 272 aa11.69□□□□□ -0.54
UBA1-201ENST00000335972 LY6G5BQ8NDX9 201 aa11.69□□□□□ -0.54
UBA1-201ENST00000335972 FMC1Q96HJ9 113 aa11.69□□□□□ -0.54
UBA1-201ENST00000335972 CRYBG3Q68DQ2 2970 aa11.69□□□□□ -0.54
UBA1-201ENST00000335972 ZNF785A8K8V0 405 aa11.68□□□□□ -0.54
UBA1-201ENST00000335972 SPATA12Q7Z6I5 190 aa11.68□□□□□ -0.54
UBA1-201ENST00000335972 C8orf49Q96NF6 230 aa11.68□□□□□ -0.54
UBA1-201ENST00000335972 UBTD1Q9HAC8 227 aa11.68□□□□□ -0.54
UBA1-201ENST00000335972 MRPL27Q9P0M9 148 aaKnown RBP11.68□□□□□ -0.54
UBA1-201ENST00000335972 IGHV3OR16-10A0A075B7F0 116 aa11.68□□□□□ -0.54
UBA1-201ENST00000335972 HLA-DRB1P01911 266 aa11.68□□□□□ -0.54
UBA1-201ENST00000335972 HBBP68871 147 aa11.68□□□□□ -0.54
UBA1-201ENST00000335972 KLRB1Q12918 225 aa11.68□□□□□ -0.54
UBA1-201ENST00000335972 C5orf64Q2M2E5 130 aa11.68□□□□□ -0.54
UBA1-201ENST00000335972 A8MWL6 223 aa11.68□□□□□ -0.54
UBA1-201ENST00000335972 NDUFB8O95169 186 aa11.68□□□□□ -0.54
UBA1-201ENST00000335972 NUTF2P61970 127 aaKnown RBP11.68□□□□□ -0.54
UBA1-201ENST00000335972 URB1-AS1Q96HZ7 61 aa11.68□□□□□ -0.54
UBA1-201ENST00000335972 OTORQ9NRC9 128 aa11.68□□□□□ -0.54
UBA1-201ENST00000335972 UTP20O75691 2785 aaKnown RBP11.68□□□□□ -0.54
UBA1-201ENST00000335972 IGHV3-66A0A0C4DH42 116 aa11.67□□□□□ -0.54
UBA1-201ENST00000335972 C19orf71A6NCJ1 209 aa11.67□□□□□ -0.54
UBA1-201ENST00000335972 HLA-DMBP28068 263 aa11.67□□□□□ -0.54
UBA1-201ENST00000335972 FANCD2OSQ96PS1 177 aa11.67□□□□□ -0.54
UBA1-201ENST00000335972 MIEN1Q9BRT3 115 aa11.67□□□□□ -0.54
UBA1-201ENST00000335972 TRBV19A0A075B6N1 114 aa11.67□□□□□ -0.54
UBA1-201ENST00000335972 BPIFA4PQ86YQ2 179 aa11.67□□□□□ -0.54
UBA1-201ENST00000335972 OR4F17Q8NGA8 305 aa11.67□□□□□ -0.54
UBA1-201ENST00000335972 SHANK2-AS3Q9BTD1 123 aa11.67□□□□□ -0.54
UBA1-201ENST00000335972 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.67□□□□□ -0.549e-7■■■■■ 34
UBA1-201ENST00000335972 RAB4AP20338 218 aa11.67□□□□□ -0.54
UBA1-201ENST00000335972 PLP1P60201 277 aa11.67□□□□□ -0.54
UBA1-201ENST00000335972 CELSR2Q9HCU4 2923 aa11.66□□□□□ -0.54
UBA1-201ENST00000335972 A0A1B0GXF2 115 aa11.66□□□□□ -0.54
UBA1-201ENST00000335972 CHEK1O14757 476 aa11.66□□□□□ -0.54
UBA1-201ENST00000335972 BTF3P20290 206 aaKnown RBP11.66□□□□□ -0.54
UBA1-201ENST00000335972 COX19Q49B96 90 aa11.66□□□□□ -0.54
UBA1-201ENST00000335972 PRSS22Q9GZN4 317 aa11.66□□□□□ -0.54
UBA1-201ENST00000335972 ARMS2P0C7Q2 107 aa11.66□□□□□ -0.54
UBA1-201ENST00000335972 ARPC1AQ92747 370 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms