RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 ZIC4Q8N9L1 334 aa5.15□□□□□ -1.59
CSMD1-201ENST00000335551 REG4Q9BYZ8 158 aa5.15□□□□□ -1.59
CSMD1-201ENST00000335551 FBLN5Q9UBX5 448 aa5.15□□□□□ -1.59
CSMD1-201ENST00000335551 IGHV5-10-1A0A0J9YXX1 117 aa5.15□□□□□ -1.59
CSMD1-201ENST00000335551 NBR2O15453 112 aa5.15□□□□□ -1.59
CSMD1-201ENST00000335551 Q0VG73 95 aa5.15□□□□□ -1.59
CSMD1-201ENST00000335551 CEP192Q8TEP8 1941 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 A0A0U1RRA0 63 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 HLA-DMBP28068 263 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 DPM3Q9P2X0 92 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 SAA2-SAA4A0A096LPE2 208 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 SAA2P0DJI9 122 aaPredicted RBP5.14□□□□□ -1.59
CSMD1-201ENST00000335551 LINC01545Q5VT33 79 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 SIGLEC15Q6ZMC9 328 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 WISP3O95389 354 aaPredicted RBP5.14□□□□□ -1.59
CSMD1-201ENST00000335551 IGKV1D-33P01593 117 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 IGKV1-33P01594 117 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 LIMS2Q7Z4I7 341 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 CENPVQ7Z7K6 275 aaPredicted RBP5.14□□□□□ -1.59
CSMD1-201ENST00000335551 TMEM256Q8N2U0 113 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 SVIPQ8NHG7 77 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 TMEM141Q96I45 108 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 CENPVL1A0A0U1RR11 272 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 IGHV2-70P01814 119 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 SYNJ2BPP57105 145 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 TANC1Q9C0D5 1861 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 A0A0G2JK05 382 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 A0A0J9YW62 118 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 PRCDQ00LT1 54 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 TRAV13-2A0A0B4J235 113 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 TCF15Q12870 199 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 ETDBQ3ZM63 59 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 POLR3KQ9Y2Y1 108 aaPredicted RBP5.14□□□□□ -1.59
CSMD1-201ENST00000335551 LRRK2Q5S007 2527 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 FNDC10F2Z333 226 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 RAMP3O60896 148 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 SRSF7Q16629 238 aaKnown RBP eCLIP5.14□□□□□ -1.59
CSMD1-201ENST00000335551 CCL19Q99731 98 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 IGHV3-35A0A0C4DH35 117 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 ACYP1P07311 99 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 FDCSPQ8NFU4 85 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 NRXN2Q9P2S2 1712 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 TRBV6-7A0A0A0MS04 114 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 TRGV9Q99603 122 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 TMEM243Q9BU79 118 aa5.14□□□□□ -1.59
CSMD1-201ENST00000335551 ZNF71Q9NQZ8 489 aaPredicted RBP5.14□□□□□ -1.59
CSMD1-201ENST00000335551 TAL2Q16559 108 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 TRAV13-1A0A0B4J241 112 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 hADV29S1A0JD25 119 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 B5MCH6 92 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 ATOX1O00244 68 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 TCRAP04437 139 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 LINC00271P0C7V0 271 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 LINC01590Q5TEZ4 76 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 PRIMA1Q86XR5 153 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 KNCNA6PVL3 124 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 CELA2BP08218 269 aaPredicted RBP5.13□□□□□ -1.59
CSMD1-201ENST00000335551 NPSP0C0P6 89 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 C5orf47Q569G3 176 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 STHQ8IWL8 128 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 SELENOKQ9Y6D0 94 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 CMC4P56277 68 aaPredicted RBP5.13□□□□□ -1.59
CSMD1-201ENST00000335551 ZNF497Q6ZNH5 498 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 IGHV1-45A0A0A0MS14 117 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 YPEL1O60688 119 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 PYYP10082 97 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 LY6EQ16553 131 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 CLEC19AQ6UXS0 136 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 YPEL2Q96QA6 119 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 SMIM20Q8N5G0 67 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 A0A087WX48 190 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 IGHV3-23P01764 117 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 ATP5J2P56134 94 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 C1QTNF5Q9BXJ0 243 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 CSTL1Q9H114 145 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 SHISA9B4DS77 424 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 MRPL55Q7Z7F7 128 aaKnown RBP5.13□□□□□ -1.59
CSMD1-201ENST00000335551 TMEM158Q8WZ71 300 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 IMMP1LQ96LU5 166 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 WFDC1Q9HC57 220 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 DEPPQ9NTK1 212 aa5.13□□□□□ -1.59
CSMD1-201ENST00000335551 CDKN1AP38936 164 aa5.12□□□□□ -1.59
CSMD1-201ENST00000335551 PDLIM4P50479 330 aa5.12□□□□□ -1.59
CSMD1-201ENST00000335551 PROB1E7EW31 1015 aa5.12□□□□□ -1.59
CSMD1-201ENST00000335551 E9PQ18 207 aa5.12□□□□□ -1.59
CSMD1-201ENST00000335551 COX8AP10176 69 aa5.12□□□□□ -1.59
CSMD1-201ENST00000335551 FOXG1P55316 489 aaPredicted RBP5.12□□□□□ -1.59
CSMD1-201ENST00000335551 C1orf162Q8NEQ5 155 aaPredicted RBP5.12□□□□□ -1.59
CSMD1-201ENST00000335551 DEFB124Q8NES8 71 aa5.12□□□□□ -1.59
CSMD1-201ENST00000335551 NPIPB5A8MRT5 1133 aa5.12□□□□□ -1.59
CSMD1-201ENST00000335551 BHLHA9Q7RTU4 235 aa5.12□□□□□ -1.59
CSMD1-201ENST00000335551 HIVEP2P31629 2446 aa5.12□□□□□ -1.59
CSMD1-201ENST00000335551 IGHV1OR15-9A0A0B4J2B8 117 aa5.12□□□□□ -1.59
CSMD1-201ENST00000335551 GATA2P23769 480 aaPredicted RBP5.12□□□□□ -1.59
CSMD1-201ENST00000335551 CEND1Q8N111 149 aa5.12□□□□□ -1.59
CSMD1-201ENST00000335551 PDE6HQ13956 83 aa5.12□□□□□ -1.59
CSMD1-201ENST00000335551 ZNRF1Q8ND25 227 aa5.12□□□□□ -1.59
CSMD1-201ENST00000335551 PRO1854Q9UHT4 67 aa5.12□□□□□ -1.59
CSMD1-201ENST00000335551 TLN1Q9Y490 2541 aaKnown RBP5.12□□□□□ -1.59
CSMD1-201ENST00000335551 FOXS1O43638 330 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms