RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 S100A7AQ86SG5 101 aa16.32■□□□□ 0.2
TPM1-204ENST00000334895 MAP1LC3B2A6NCE7 125 aa16.31■□□□□ 0.2
TPM1-204ENST00000334895 OVOL1O14753 267 aa16.31■□□□□ 0.2
TPM1-204ENST00000334895 CHEK1O14757 476 aa16.31■□□□□ 0.2
TPM1-204ENST00000334895 MRPS12O15235 138 aaKnown RBP16.31■□□□□ 0.2
TPM1-204ENST00000334895 CSN3P07498 182 aa16.31■□□□□ 0.2
TPM1-204ENST00000334895 H2AFB1P0C5Y9 115 aa16.31■□□□□ 0.2
TPM1-204ENST00000334895 CBLN1P23435 193 aa16.31■□□□□ 0.2
TPM1-204ENST00000334895 FGF8P55075 233 aaPredicted RBP16.31■□□□□ 0.2
TPM1-204ENST00000334895 SAT2Q96F10 170 aaPredicted RBP16.31■□□□□ 0.2
TPM1-204ENST00000334895 RHPN1-AS1Q9BWJ2 59 aa16.31■□□□□ 0.2
TPM1-204ENST00000334895 MAP1LC3BQ9GZQ8 125 aa16.31■□□□□ 0.2
TPM1-204ENST00000334895 PEMTQ9UBM1 199 aa16.31■□□□□ 0.2
TPM1-204ENST00000334895 FOLR2P14207 255 aa16.3■□□□□ 0.2
TPM1-204ENST00000334895 C16orf54Q6UWD8 224 aa16.3■□□□□ 0.2
TPM1-204ENST00000334895 SFT2D1Q8WV19 159 aa16.3■□□□□ 0.2
TPM1-204ENST00000334895 SELENOKQ9Y6D0 94 aa16.3■□□□□ 0.2
TPM1-204ENST00000334895 A0A1B0GV50 99 aa16.3■□□□□ 0.2
TPM1-204ENST00000334895 ARL14EPLP0DKL9 152 aa16.3■□□□□ 0.2
TPM1-204ENST00000334895 PYYP10082 97 aa16.3■□□□□ 0.2
TPM1-204ENST00000334895 GP9P14770 177 aa16.3■□□□□ 0.2
TPM1-204ENST00000334895 LRRC20Q8TCA0 184 aa16.3■□□□□ 0.2
TPM1-204ENST00000334895 GLMPQ8WWB7 406 aa16.3■□□□□ 0.2
TPM1-204ENST00000334895 PFDN2Q9UHV9 154 aa16.3■□□□□ 0.2
TPM1-204ENST00000334895 TAS2R45P59539 299 aa16.29■□□□□ 0.2
TPM1-204ENST00000334895 BLOC1S1P78537 153 aa16.29■□□□□ 0.2
TPM1-204ENST00000334895 KHDC3LQ587J8 217 aa16.29■□□□□ 0.2
TPM1-204ENST00000334895 C1orf194Q5T5A4 169 aa16.29■□□□□ 0.2
TPM1-204ENST00000334895 ELOVL1Q9BW60 279 aa16.29■□□□□ 0.2
TPM1-204ENST00000334895 TRRAPQ9Y4A5 3859 aa16.29■□□□□ 0.2
TPM1-204ENST00000334895 TRAV1-1A0A0B4J248 108 aa16.28■□□□□ 0.2
TPM1-204ENST00000334895 CCL20P78556 96 aa16.28■□□□□ 0.2
TPM1-204ENST00000334895 OR8I2Q8N0Y5 310 aa16.28■□□□□ 0.2
TPM1-204ENST00000334895 LYPD6BQ8NI32 183 aa16.28■□□□□ 0.2
TPM1-204ENST00000334895 MARC2Q969Z3 335 aa16.28■□□□□ 0.2
TPM1-204ENST00000334895 NARS2Q96I59 477 aaKnown RBP16.28■□□□□ 0.2
TPM1-204ENST00000334895 C17orf77Q96MU5 243 aa16.28■□□□□ 0.2
TPM1-204ENST00000334895 TMPRSS5Q9H3S3 457 aa16.28■□□□□ 0.2
TPM1-204ENST00000334895 MLXQ9UH92 298 aa16.28■□□□□ 0.2
TPM1-204ENST00000334895 RNF24Q9Y225 148 aa16.28■□□□□ 0.2
TPM1-204ENST00000334895 SMAD5-AS1Q9Y6J3 95 aa16.28■□□□□ 0.2
TPM1-204ENST00000334895 A0A1W2PS18 150 aa16.27■□□□□ 0.2
TPM1-204ENST00000334895 OR7C2O60412 319 aa16.27■□□□□ 0.2
TPM1-204ENST00000334895 TMEM14CQ9P0S9 112 aa16.27■□□□□ 0.2
TPM1-204ENST00000334895 CXorf1O96002 111 aa16.27■□□□□ 0.19
TPM1-204ENST00000334895 SNRPCP09234 159 aaKnown RBP16.27■□□□□ 0.19
TPM1-204ENST00000334895 OR10J4P0C629 311 aa16.27■□□□□ 0.19
TPM1-204ENST00000334895 CLLU1Q5K131 121 aa16.27■□□□□ 0.19
TPM1-204ENST00000334895 PQLC2Q6ZP29 291 aa16.27■□□□□ 0.19
TPM1-204ENST00000334895 BPIFA4PQ86YQ2 179 aa16.27■□□□□ 0.19
TPM1-204ENST00000334895 FXYD5Q96DB9 178 aa16.27■□□□□ 0.19
TPM1-204ENST00000334895 PAXXQ9BUH6 204 aa16.27■□□□□ 0.19
TPM1-204ENST00000334895 OR51M1Q9H341 326 aa16.27■□□□□ 0.19
TPM1-204ENST00000334895 M0QZ24 198 aa16.26■□□□□ 0.19
TPM1-204ENST00000334895 IGLC2P0DOY2 106 aa16.26■□□□□ 0.19
TPM1-204ENST00000334895 RPL7P18124 248 aaKnown RBP16.26■□□□□ 0.19
TPM1-204ENST00000334895 GCHFRP30047 84 aa16.26■□□□□ 0.19
TPM1-204ENST00000334895 GRAMD2BQ96HH9 432 aa16.26■□□□□ 0.19
TPM1-204ENST00000334895 HRH4Q9H3N8 390 aa16.26■□□□□ 0.19
TPM1-204ENST00000334895 H3BQ15 152 aa16.25■□□□□ 0.19
TPM1-204ENST00000334895 STXBP6Q8NFX7 210 aa16.25■□□□□ 0.19
TPM1-204ENST00000334895 TMEM231Q9H6L2 316 aa16.25■□□□□ 0.19
TPM1-204ENST00000334895 SIGLEC8Q9NYZ4 499 aa16.25■□□□□ 0.19
TPM1-204ENST00000334895 BMI1P35226 326 aa16.24■□□□□ 0.19
TPM1-204ENST00000334895 UBE2L3P68036 154 aaKnown RBP16.24■□□□□ 0.19
TPM1-204ENST00000334895 FAM90A2PQ658T7 463 aa16.24■□□□□ 0.19
TPM1-204ENST00000334895 SIGLEC15Q6ZMC9 328 aa16.24■□□□□ 0.19
TPM1-204ENST00000334895 ZNF586Q9NXT0 402 aa16.24■□□□□ 0.19
TPM1-204ENST00000334895 H3BTX0 84 aa16.23■□□□□ 0.19
TPM1-204ENST00000334895 HBE1P02100 147 aa16.23■□□□□ 0.19
TPM1-204ENST00000334895 RAB14P61106 215 aa16.23■□□□□ 0.19
TPM1-204ENST00000334895 TCF24Q7RTU0 167 aa16.23■□□□□ 0.19
TPM1-204ENST00000334895 SUN5Q8TC36 379 aa16.23■□□□□ 0.19
TPM1-204ENST00000334895 GPR82Q96P67 336 aa16.23■□□□□ 0.19
TPM1-204ENST00000334895 IQCF2Q8IXL9 164 aa16.23■□□□□ 0.19
TPM1-204ENST00000334895 TEX46H3BTG2 121 aa16.22■□□□□ 0.19
TPM1-204ENST00000334895 HIST1H1EP10412 219 aaKnown RBP16.22■□□□□ 0.19
TPM1-204ENST00000334895 GALR1P47211 349 aa16.22■□□□□ 0.19
TPM1-204ENST00000334895 SAP30O75446 220 aa16.21■□□□□ 0.19
TPM1-204ENST00000334895 DEFB114Q30KQ6 69 aa16.21■□□□□ 0.19
TPM1-204ENST00000334895 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.21■□□□□ 0.19
TPM1-204ENST00000334895 WFDC9Q8NEX5 89 aa16.21■□□□□ 0.19
TPM1-204ENST00000334895 A0A087X0K7 114 aa16.2■□□□□ 0.18
TPM1-204ENST00000334895 HELTA6NFD8 242 aa16.2■□□□□ 0.18
TPM1-204ENST00000334895 NBEAP1P0C6P0 100 aa16.2■□□□□ 0.18
TPM1-204ENST00000334895 DYNLRB2Q8TF09 96 aa16.2■□□□□ 0.18
TPM1-204ENST00000334895 BLNKQ8WV28 456 aa16.2■□□□□ 0.18
TPM1-204ENST00000334895 TRBV19A0A075B6N1 114 aa16.19■□□□□ 0.18
TPM1-204ENST00000334895 SLC17A3O00476 420 aa16.19■□□□□ 0.18
TPM1-204ENST00000334895 NDUFB4O95168 129 aa16.19■□□□□ 0.18
TPM1-204ENST00000334895 ATF4P18848 351 aaPredicted RBP16.19■□□□□ 0.18
TPM1-204ENST00000334895 TMEM167BQ9NRX6 74 aa16.19■□□□□ 0.18
TPM1-204ENST00000334895 IGKV3-7A0A075B6H7 116 aa16.19■□□□□ 0.18
TPM1-204ENST00000334895 ZNF785A8K8V0 405 aa16.19■□□□□ 0.18
TPM1-204ENST00000334895 PSMB3P49720 205 aa16.19■□□□□ 0.18
TPM1-204ENST00000334895 CD300EQ496F6 205 aaPredicted RBP16.19■□□□□ 0.18
TPM1-204ENST00000334895 TMEM61Q8N0U2 210 aa16.19■□□□□ 0.18
TPM1-204ENST00000334895 RPL11P62913 178 aaKnown RBP16.18■□□□□ 0.18
TPM1-204ENST00000334895 GNG13Q9P2W3 67 aa16.18■□□□□ 0.18
TPM1-204ENST00000334895 IZUMO1RA6ND01 250 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms