RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 ARMS2P0C7Q2 107 aa18.81■□□□□ 0.6
TSKU-201ENST00000333090 ARF6P62330 175 aa18.81■□□□□ 0.6
TSKU-201ENST00000333090 PSG9Q00887 426 aa18.81■□□□□ 0.6
TSKU-201ENST00000333090 FAM71F2Q6NXP2 309 aa18.81■□□□□ 0.6
TSKU-201ENST00000333090 ZADH2Q8N4Q0 377 aa18.81■□□□□ 0.6
TSKU-201ENST00000333090 SRSF12Q8WXF0 261 aaKnown RBP18.81■□□□□ 0.6
TSKU-201ENST00000333090 CCL17Q92583 94 aa18.81■□□□□ 0.6
TSKU-201ENST00000333090 VPS25Q9BRG1 176 aa18.81■□□□□ 0.6
TSKU-201ENST00000333090 A0A1B0GUT8 65 aa18.81■□□□□ 0.6
TSKU-201ENST00000333090 IGLV2-11P01706 119 aa18.81■□□□□ 0.6
TSKU-201ENST00000333090 CNTFRP26992 372 aa18.81■□□□□ 0.6
TSKU-201ENST00000333090 LINC01545Q5VT33 79 aa18.81■□□□□ 0.6
TSKU-201ENST00000333090 ARL6IP6Q8N6S5 226 aa18.81■□□□□ 0.6
TSKU-201ENST00000333090 PTPRZ1P23471 2315 aaPredicted RBP18.81■□□□□ 0.6
TSKU-201ENST00000333090 GPR183P32249 361 aa18.8■□□□□ 0.6
TSKU-201ENST00000333090 MC5RP33032 325 aa18.8■□□□□ 0.6
TSKU-201ENST00000333090 PPIAL4EA0A075B759 164 aa18.8■□□□□ 0.6
TSKU-201ENST00000333090 PPIAL4DF5H284 164 aa18.8■□□□□ 0.6
TSKU-201ENST00000333090 NDUFB3O43676 98 aa18.8■□□□□ 0.6
TSKU-201ENST00000333090 PPIAL4FP0DN26 164 aa18.8■□□□□ 0.6
TSKU-201ENST00000333090 OCIAD2Q56VL3 154 aa18.8■□□□□ 0.6
TSKU-201ENST00000333090 LINC00311Q8N616 119 aa18.8■□□□□ 0.6
TSKU-201ENST00000333090 TPPP3Q9BW30 176 aa18.8■□□□□ 0.6
TSKU-201ENST00000333090 C17orf100A8MU93 164 aa18.8■□□□□ 0.6
TSKU-201ENST00000333090 CD5LO43866 347 aa18.8■□□□□ 0.6
TSKU-201ENST00000333090 LGALS7P47929 136 aa18.8■□□□□ 0.6
TSKU-201ENST00000333090 FOXE3Q13461 319 aa18.8■□□□□ 0.6
TSKU-201ENST00000333090 TEX45Q8NA69 505 aa18.8■□□□□ 0.6
TSKU-201ENST00000333090 SLC25A39Q9BZJ4 359 aaPredicted RBP18.79■□□□□ 0.6
TSKU-201ENST00000333090 PLP1P60201 277 aa18.78■□□□□ 0.6
TSKU-201ENST00000333090 ZC2HC1AQ96GY0 325 aa18.78■□□□□ 0.6
TSKU-201ENST00000333090 ACACAQ13085 2346 aa18.78■□□□□ 0.6
TSKU-201ENST00000333090 TRAV8-6A0A0B4J262 113 aa18.78■□□□□ 0.6
TSKU-201ENST00000333090 NCR2O95944 276 aa18.78■□□□□ 0.6
TSKU-201ENST00000333090 PPBPP02775 128 aa18.78■□□□□ 0.6
TSKU-201ENST00000333090 PRSS3P2Q8NHM4 247 aa18.78■□□□□ 0.6
TSKU-201ENST00000333090 ZNF747Q9BV97 191 aa18.78■□□□□ 0.6
TSKU-201ENST00000333090 OVOL3O00110 214 aa18.77■□□□□ 0.6
TSKU-201ENST00000333090 COX8AP10176 69 aa18.77■□□□□ 0.6
TSKU-201ENST00000333090 C1orf185Q5T7R7 199 aa18.77■□□□□ 0.6
TSKU-201ENST00000333090 FA2HQ7L5A8 372 aa18.77■□□□□ 0.6
TSKU-201ENST00000333090 TPRP12270 2363 aaKnown RBP18.77■□□□□ 0.6
TSKU-201ENST00000333090 ZNF785A8K8V0 405 aa18.77■□□□□ 0.59
TSKU-201ENST00000333090 DLX1P56177 255 aa18.77■□□□□ 0.59
TSKU-201ENST00000333090 PRB3Q04118 309 aaPredicted RBP18.77■□□□□ 0.59
TSKU-201ENST00000333090 PVRIGQ6DKI7 326 aa18.77■□□□□ 0.59
TSKU-201ENST00000333090 BPIFA4PQ86YQ2 179 aa18.77■□□□□ 0.59
TSKU-201ENST00000333090 RPS20P60866 119 aaKnown RBP18.76■□□□□ 0.59
TSKU-201ENST00000333090 RIGQ13278 110 aa18.76■□□□□ 0.59
TSKU-201ENST00000333090 C2orf91Q6ZV80 131 aa18.76■□□□□ 0.59
TSKU-201ENST00000333090 CTSZQ9UBR2 303 aa18.76■□□□□ 0.59
TSKU-201ENST00000333090 TMEM178BH3BS89 294 aa18.76■□□□□ 0.59
TSKU-201ENST00000333090 ADIPOQQ15848 244 aa18.76■□□□□ 0.59
TSKU-201ENST00000333090 RBP4P02753 201 aa18.75■□□□□ 0.59
TSKU-201ENST00000333090 CSN1S1P47710 185 aa18.75■□□□□ 0.59
TSKU-201ENST00000333090 TMEM108Q6UXF1 575 aa18.75■□□□□ 0.59
TSKU-201ENST00000333090 C8orf31Q8N9H6 132 aa18.75■□□□□ 0.59
TSKU-201ENST00000333090 NUP37Q8NFH4 326 aa18.75■□□□□ 0.59
TSKU-201ENST00000333090 IGLC1P0CG04 106 aa18.75■□□□□ 0.59
TSKU-201ENST00000333090 C16orf54Q6UWD8 224 aa18.75■□□□□ 0.59
TSKU-201ENST00000333090 WFDC8Q8IUA0 241 aa18.75■□□□□ 0.59
TSKU-201ENST00000333090 OR10AG1Q8NH19 301 aa18.75■□□□□ 0.59
TSKU-201ENST00000333090 C17orf77Q96MU5 243 aa18.75■□□□□ 0.59
TSKU-201ENST00000333090 PEF1Q9UBV8 284 aaKnown RBP18.75■□□□□ 0.59
TSKU-201ENST00000333090 CEP295Q9C0D2 2601 aa18.75■□□□□ 0.59
TSKU-201ENST00000333090 TACC2O95359 2948 aa18.75■□□□□ 0.59
TSKU-201ENST00000333090 GAGE12BA1L429 117 aa18.74■□□□□ 0.59
TSKU-201ENST00000333090 C7orf71A4D174 169 aa18.74■□□□□ 0.59
TSKU-201ENST00000333090 LOXP28300 417 aaPredicted RBP18.74■□□□□ 0.59
TSKU-201ENST00000333090 F11RQ9Y624 299 aaKnown RBP18.74■□□□□ 0.59
TSKU-201ENST00000333090 MALRD1Q5VYJ5 2156 aa18.74■□□□□ 0.59
TSKU-201ENST00000333090 KLK10O43240 276 aa18.74■□□□□ 0.59
TSKU-201ENST00000333090 FAM106CPP0CH98 169 aa18.73■□□□□ 0.59
TSKU-201ENST00000333090 IGHV1-8P0DP01 117 aa18.73■□□□□ 0.59
TSKU-201ENST00000333090 FAM106AQ4KMX7 169 aa18.73■□□□□ 0.59
TSKU-201ENST00000333090 OR8A1Q8NGG7 326 aa18.73■□□□□ 0.59
TSKU-201ENST00000333090 RASL11BQ9BPW5 248 aa18.73■□□□□ 0.59
TSKU-201ENST00000333090 TMEM14CQ9P0S9 112 aa18.73■□□□□ 0.59
TSKU-201ENST00000333090 SIGLEC9Q9Y336 463 aa18.73■□□□□ 0.59
TSKU-201ENST00000333090 ZNF318Q5VUA4 2279 aa18.73■□□□□ 0.59
TSKU-201ENST00000333090 HOXB4P17483 251 aaPredicted RBP18.73■□□□□ 0.59
TSKU-201ENST00000333090 DLX6P56179 175 aa18.72■□□□□ 0.59
TSKU-201ENST00000333090 LOC389332A0A1B0GUA5 103 aa18.72■□□□□ 0.59
TSKU-201ENST00000333090 IFI27P40305 119 aaPredicted RBP18.72■□□□□ 0.59
TSKU-201ENST00000333090 UQCRFS1P47985 274 aa18.72■□□□□ 0.59
TSKU-201ENST00000333090 TCTAP57738 103 aa18.72■□□□□ 0.59
TSKU-201ENST00000333090 TMEM155Q4W5P6 130 aa18.71■□□□□ 0.59
TSKU-201ENST00000333090 TMEM97Q5BJF2 176 aa18.71■□□□□ 0.59
TSKU-201ENST00000333090 APC2O95996 2303 aa18.71■□□□□ 0.59
TSKU-201ENST00000333090 TEX22C9J3V5 150 aa18.71■□□□□ 0.59
TSKU-201ENST00000333090 LOXL1Q08397 574 aaPredicted RBP18.71■□□□□ 0.59
TSKU-201ENST00000333090 PPP1R27Q86WC6 154 aa18.71■□□□□ 0.59
TSKU-201ENST00000333090 NGBQ9NPG2 151 aa18.71■□□□□ 0.59
TSKU-201ENST00000333090 TMEM133Q9H2Q1 129 aa18.7■□□□□ 0.58
TSKU-201ENST00000333090 PSG8Q9UQ74 426 aa18.7■□□□□ 0.58
TSKU-201ENST00000333090 TRBV19A0A075B6N1 114 aa18.7■□□□□ 0.58
TSKU-201ENST00000333090 SERTM2A0A1B0GWG4 89 aa18.7■□□□□ 0.58
TSKU-201ENST00000333090 ZZEF1O43149 2961 aa18.7■□□□□ 0.58
TSKU-201ENST00000333090 FBXL15Q9H469 300 aa18.7■□□□□ 0.58
TSKU-201ENST00000333090 SH3BGRL2Q9UJC5 107 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms