RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 TRAV5A0A0B4J249 113 aa12.63□□□□□ -0.39
PDGFB-201ENST00000331163 J3KRW8 73 aa12.63□□□□□ -0.39
PDGFB-201ENST00000331163 HNRNPA3P51991 378 aaKnown RBP12.63□□□□□ -0.39
PDGFB-201ENST00000331163 SPATA45Q537H7 98 aa12.63□□□□□ -0.39
PDGFB-201ENST00000331163 COL5A1-AS1Q5SY13 56 aa12.63□□□□□ -0.39
PDGFB-201ENST00000331163 TREML4Q6UXN2 200 aa12.63□□□□□ -0.39
PDGFB-201ENST00000331163 ST6GALNAC6Q969X2 333 aa12.63□□□□□ -0.39
PDGFB-201ENST00000331163 SFRP2Q96HF1 295 aa12.63□□□□□ -0.39
PDGFB-201ENST00000331163 SIRPDQ9H106 197 aa12.63□□□□□ -0.39
PDGFB-201ENST00000331163 TMEM167AQ8TBQ9 72 aa12.63□□□□□ -0.39
PDGFB-201ENST00000331163 TNFRSF14Q92956 283 aa12.63□□□□□ -0.39
PDGFB-201ENST00000331163 TMEM14BQ9NUH8 114 aa12.63□□□□□ -0.39
PDGFB-201ENST00000331163 KIR2DL5BA0A0G2JN68 375 aa12.62□□□□□ -0.39
PDGFB-201ENST00000331163 KIR2DL5BA0A0G2JPC4 375 aa12.62□□□□□ -0.39
PDGFB-201ENST00000331163 CGB1A6NKQ9 187 aa12.62□□□□□ -0.39
PDGFB-201ENST00000331163 KIR2DL5AQ8N109 375 aa12.62□□□□□ -0.39
PDGFB-201ENST00000331163 CBY3A6NI87 242 aa12.62□□□□□ -0.39
PDGFB-201ENST00000331163 IL4P05112 153 aa12.62□□□□□ -0.39
PDGFB-201ENST00000331163 TIGITQ495A1 244 aa12.62□□□□□ -0.39
PDGFB-201ENST00000331163 MRPL54Q6P161 138 aaKnown RBP12.62□□□□□ -0.39
PDGFB-201ENST00000331163 CENPVQ7Z7K6 275 aaPredicted RBP12.62□□□□□ -0.39
PDGFB-201ENST00000331163 FCGR2BP31994 310 aaPredicted RBP12.61□□□□□ -0.39
PDGFB-201ENST00000331163 PRR27Q6MZM9 219 aa12.61□□□□□ -0.39
PDGFB-201ENST00000331163 OR8I2Q8N0Y5 310 aa12.61□□□□□ -0.39
PDGFB-201ENST00000331163 ZNF586Q9NXT0 402 aa12.61□□□□□ -0.39
PDGFB-201ENST00000331163 DSCAML1Q8TD84 2053 aa12.61□□□□□ -0.39
PDGFB-201ENST00000331163 HOXA3O43365 443 aaPredicted RBP12.61□□□□□ -0.39
PDGFB-201ENST00000331163 DSCR9P59020 149 aa12.61□□□□□ -0.39
PDGFB-201ENST00000331163 RHOGP84095 191 aa12.61□□□□□ -0.39
PDGFB-201ENST00000331163 VPS13CQ709C8 3753 aa12.61□□□□□ -0.39
PDGFB-201ENST00000331163 ARL14EPLP0DKL9 152 aa12.61□□□□□ -0.39
PDGFB-201ENST00000331163 MGST1P10620 155 aaKnown RBP12.61□□□□□ -0.39
PDGFB-201ENST00000331163 TMEM14EPQ6UXP3 125 aa12.61□□□□□ -0.39
PDGFB-201ENST00000331163 OCC1Q8TAD7 63 aa12.61□□□□□ -0.39
PDGFB-201ENST00000331163 THYN1Q9P016 225 aa12.61□□□□□ -0.39
PDGFB-201ENST00000331163 RNASE2P10153 161 aaKnown RBP12.6□□□□□ -0.39
PDGFB-201ENST00000331163 UBE2L3P68036 154 aaKnown RBP12.6□□□□□ -0.39
PDGFB-201ENST00000331163 TEX45Q8NA69 505 aa12.6□□□□□ -0.39
PDGFB-201ENST00000331163 SRD5A1P18405 259 aa12.6□□□□□ -0.39
PDGFB-201ENST00000331163 NDPQ00604 133 aa12.6□□□□□ -0.39
PDGFB-201ENST00000331163 C15orf32Q32M92 178 aa12.6□□□□□ -0.39
PDGFB-201ENST00000331163 STPG4Q8N801 248 aa12.6□□□□□ -0.39
PDGFB-201ENST00000331163 RNASE8Q8TDE3 154 aaKnown RBP12.6□□□□□ -0.39
PDGFB-201ENST00000331163 MIR17HGQ75NE6 70 aa12.6□□□□□ -0.39
PDGFB-201ENST00000331163 LY6G5BQ8NDX9 201 aa12.6□□□□□ -0.39
PDGFB-201ENST00000331163 OR11H6Q8NGC7 330 aa12.6□□□□□ -0.39
PDGFB-201ENST00000331163 FNDC4Q9H6D8 234 aaPredicted RBP12.6□□□□□ -0.39
PDGFB-201ENST00000331163 SEPSECSQ9HD40 501 aaKnown RBP12.6□□□□□ -0.39
PDGFB-201ENST00000331163 TBL2Q9Y4P3 447 aaKnown RBP12.6□□□□□ -0.39
PDGFB-201ENST00000331163 RNF114Q9Y508 228 aa12.6□□□□□ -0.39
PDGFB-201ENST00000331163 ZNF253O75346 499 aa12.59□□□□□ -0.39
PDGFB-201ENST00000331163 COMPP49747 757 aaPredicted RBP12.59□□□□□ -0.39
PDGFB-201ENST00000331163 RPL15P61313 204 aaKnown RBP12.59□□□□□ -0.39
PDGFB-201ENST00000331163 LCN12Q6JVE5 192 aa12.59□□□□□ -0.39
PDGFB-201ENST00000331163 LINC00311Q8N616 119 aa12.59□□□□□ -0.39
PDGFB-201ENST00000331163 ASCL2Q99929 193 aa12.59□□□□□ -0.39
PDGFB-201ENST00000331163 NCOR1P1Q9H4R4 102 aa12.59□□□□□ -0.39
PDGFB-201ENST00000331163 MRPL36Q9P0J6 103 aaKnown RBP12.59□□□□□ -0.39
PDGFB-201ENST00000331163 CLEC3BP05452 202 aa12.59□□□□□ -0.39
PDGFB-201ENST00000331163 ATP6V1FQ16864 119 aa12.59□□□□□ -0.39
PDGFB-201ENST00000331163 DUX3Q96PT4 197 aa12.59□□□□□ -0.39
PDGFB-201ENST00000331163 PYYP10082 97 aa12.58□□□□□ -0.39
PDGFB-201ENST00000331163 VDAC2P45880 294 aaPredicted RBP12.58□□□□□ -0.39
PDGFB-201ENST00000331163 C1orf122Q6ZSJ8 110 aa12.58□□□□□ -0.39
PDGFB-201ENST00000331163 TRBV20OR9-2A0A075B6H5 130 aa12.58□□□□□ -0.4
PDGFB-201ENST00000331163 MINOS1Q5TGZ0 78 aa12.58□□□□□ -0.4
PDGFB-201ENST00000331163 Q6ZS46 218 aa12.58□□□□□ -0.4
PDGFB-201ENST00000331163 NHLRC2Q8NBF2 726 aa12.58□□□□□ -0.4
PDGFB-201ENST00000331163 MGST2Q99735 147 aa12.58□□□□□ -0.4
PDGFB-201ENST00000331163 NDUFA4L2Q9NRX3 87 aa12.58□□□□□ -0.4
PDGFB-201ENST00000331163 MINOS1-NBL1R4GNA1 71 aa12.58□□□□□ -0.4
PDGFB-201ENST00000331163 MXRA5Q9NR99 2828 aa12.58□□□□□ -0.4
PDGFB-201ENST00000331163 TET2Q6N021 2002 aaPredicted RBP12.58□□□□□ -0.4
PDGFB-201ENST00000331163 ITGB1BP1O14713 200 aa12.58□□□□□ -0.4
PDGFB-201ENST00000331163 CD69Q07108 199 aa12.58□□□□□ -0.4
PDGFB-201ENST00000331163 C10orf113Q5VZT2 155 aa12.58□□□□□ -0.4
PDGFB-201ENST00000331163 H0Y8G0 127 aa12.57□□□□□ -0.4
PDGFB-201ENST00000331163 IGFL4Q6B9Z1 124 aa12.57□□□□□ -0.4
PDGFB-201ENST00000331163 PSMG3-AS1Q96PY0 264 aa12.57□□□□□ -0.4
PDGFB-201ENST00000331163 PPP1R14DQ9NXH3 145 aa12.57□□□□□ -0.4
PDGFB-201ENST00000331163 IGLV2-23P01705 113 aa12.57□□□□□ -0.4
PDGFB-201ENST00000331163 AMY1AP04745 511 aa12.57□□□□□ -0.4
PDGFB-201ENST00000331163 RHOBP62745 196 aa12.57□□□□□ -0.4
PDGFB-201ENST00000331163 VAMP3Q15836 100 aa12.57□□□□□ -0.4
PDGFB-201ENST00000331163 OR4A5Q8NH83 315 aa12.57□□□□□ -0.4
PDGFB-201ENST00000331163 GGTLC1Q9BX51 225 aa12.56□□□□□ -0.4
PDGFB-201ENST00000331163 C21orf62Q9NYP8 219 aa12.56□□□□□ -0.4
PDGFB-201ENST00000331163 ZNF785A8K8V0 405 aa12.56□□□□□ -0.4
PDGFB-201ENST00000331163 NDUFB8O95169 186 aa12.56□□□□□ -0.4
PDGFB-201ENST00000331163 ZNF137PP52743 207 aa12.56□□□□□ -0.4
PDGFB-201ENST00000331163 EIF4EBP1Q13541 118 aaPredicted RBP12.56□□□□□ -0.4
PDGFB-201ENST00000331163 COTL1Q14019 142 aa12.56□□□□□ -0.4
PDGFB-201ENST00000331163 LINC00305Q7Z4B0 112 aa12.56□□□□□ -0.4
PDGFB-201ENST00000331163 TPPP3Q9BW30 176 aa12.56□□□□□ -0.4
PDGFB-201ENST00000331163 TP53TG3Q9ULZ0 132 aa12.56□□□□□ -0.4
PDGFB-201ENST00000331163 C10orf99Q6UWK7 81 aa12.56□□□□□ -0.4
PDGFB-201ENST00000331163 NRN1Q9NPD7 142 aa12.56□□□□□ -0.4
PDGFB-201ENST00000331163 OR4C5Q8NGB2 326 aa12.55□□□□□ -0.4
PDGFB-201ENST00000331163 VPS25Q9BRG1 176 aa12.55□□□□□ -0.4
PDGFB-201ENST00000331163 RNASE7Q9H1E1 156 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms