RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 ZC2HC1AQ96GY0 325 aa11.44□□□□□ -0.58
EPHB3-201ENST00000330394 METTL26Q96S19 204 aa11.44□□□□□ -0.58
EPHB3-201ENST00000330394 ZNF329Q86UD4 541 aa11.44□□□□□ -0.58
EPHB3-201ENST00000330394 EML6Q6ZMW3 1958 aa11.44□□□□□ -0.58
EPHB3-201ENST00000330394 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.43□□□□□ -0.58
EPHB3-201ENST00000330394 PDLIM4P50479 330 aa11.43□□□□□ -0.58
EPHB3-201ENST00000330394 OR10J6PQ8NGY7 276 aa11.43□□□□□ -0.58
EPHB3-201ENST00000330394 C8orf46Q8TAG6 207 aa11.43□□□□□ -0.58
EPHB3-201ENST00000330394 DPM2O94777 84 aa11.43□□□□□ -0.58
EPHB3-201ENST00000330394 LGALS3P17931 250 aaKnown RBP11.43□□□□□ -0.58
EPHB3-201ENST00000330394 CFHR2P36980 270 aa11.43□□□□□ -0.58
EPHB3-201ENST00000330394 FOXC1Q12948 553 aa11.43□□□□□ -0.58
EPHB3-201ENST00000330394 TMEM30BQ3MIR4 351 aa11.43□□□□□ -0.58
EPHB3-201ENST00000330394 ZC2HC1BQ5TFG8 222 aa11.43□□□□□ -0.58
EPHB3-201ENST00000330394 FAM71F2Q6NXP2 309 aa11.43□□□□□ -0.58
EPHB3-201ENST00000330394 PSG3Q16557 428 aa11.43□□□□□ -0.58
EPHB3-201ENST00000330394 IGHV2-26A0A0B4J1V2 119 aa11.43□□□□□ -0.58
EPHB3-201ENST00000330394 A0A1B0GW15 77 aa11.43□□□□□ -0.58
EPHB3-201ENST00000330394 ESDP10768 282 aa11.43□□□□□ -0.58
EPHB3-201ENST00000330394 C1orf162Q8NEQ5 155 aaPredicted RBP11.43□□□□□ -0.58
EPHB3-201ENST00000330394 C17orf100A8MU93 164 aa11.42□□□□□ -0.58
EPHB3-201ENST00000330394 FABP5P3A8MUU1 101 aa11.42□□□□□ -0.58
EPHB3-201ENST00000330394 SS18L1O75177 396 aaPredicted RBP11.42□□□□□ -0.58
EPHB3-201ENST00000330394 IGHV1-46P01743 117 aa11.42□□□□□ -0.58
EPHB3-201ENST00000330394 ZNF134P52741 427 aa11.42□□□□□ -0.58
EPHB3-201ENST00000330394 EBLN2Q6P2I7 272 aa11.42□□□□□ -0.58
EPHB3-201ENST00000330394 OR9G4Q8NGQ1 327 aa11.42□□□□□ -0.58
EPHB3-201ENST00000330394 SLC25A39Q9BZJ4 359 aaPredicted RBP11.42□□□□□ -0.58
EPHB3-201ENST00000330394 DUX4L9Q6RFH8 374 aaPredicted RBP11.42□□□□□ -0.58
EPHB3-201ENST00000330394 PTPN13Q12923 2485 aa11.42□□□□□ -0.58
EPHB3-201ENST00000330394 IGHV1-24A0A0C4DH33 117 aa11.42□□□□□ -0.58
EPHB3-201ENST00000330394 IGKCP01834 107 aa11.42□□□□□ -0.58
EPHB3-201ENST00000330394 EMP1P54849 157 aa11.42□□□□□ -0.58
EPHB3-201ENST00000330394 GAGE13Q4V321 117 aa11.42□□□□□ -0.58
EPHB3-201ENST00000330394 CYSLTR1Q9Y271 337 aa11.42□□□□□ -0.58
EPHB3-201ENST00000330394 ZNF256Q9Y2P7 627 aaPredicted RBP11.42□□□□□ -0.58
EPHB3-201ENST00000330394 NTN3O00634 580 aaPredicted RBP11.41□□□□□ -0.58
EPHB3-201ENST00000330394 MEF2CQ06413 473 aaPredicted RBP11.41□□□□□ -0.58
EPHB3-201ENST00000330394 BSPH1Q075Z2 132 aa11.41□□□□□ -0.58
EPHB3-201ENST00000330394 PAX2Q02962 417 aa11.41□□□□□ -0.58
EPHB3-201ENST00000330394 TMEM213A2RRL7 107 aa11.41□□□□□ -0.58
EPHB3-201ENST00000330394 PF4V1P10720 104 aa11.41□□□□□ -0.58
EPHB3-201ENST00000330394 ERVK11-1P61568 191 aa11.41□□□□□ -0.58
EPHB3-201ENST00000330394 CSPG4Q6UVK1 2322 aa11.41□□□□□ -0.58
EPHB3-201ENST00000330394 PIEZO2Q9H5I5 2752 aa11.4□□□□□ -0.58
EPHB3-201ENST00000330394 LINC00173Q6ZV60 143 aa11.4□□□□□ -0.58
EPHB3-201ENST00000330394 RPRMLQ8N4K4 120 aa11.4□□□□□ -0.58
EPHB3-201ENST00000330394 COX6CP09669 75 aa11.4□□□□□ -0.58
EPHB3-201ENST00000330394 Q6ZR03 302 aa11.4□□□□□ -0.58
EPHB3-201ENST00000330394 DPM3Q9P2X0 92 aa11.4□□□□□ -0.58
EPHB3-201ENST00000330394 ANKHD1Q8IWZ3 2542 aaKnown RBP11.4□□□□□ -0.58
EPHB3-201ENST00000330394 K7EP13 123 aa11.4□□□□□ -0.58
EPHB3-201ENST00000330394 FTH1P19P0C7X4 201 aa11.4□□□□□ -0.58
EPHB3-201ENST00000330394 ETDBQ3ZM63 59 aa11.4□□□□□ -0.58
EPHB3-201ENST00000330394 BVES-AS1Q5T3Y7 98 aa11.4□□□□□ -0.58
EPHB3-201ENST00000330394 TMEM133Q9H2Q1 129 aa11.4□□□□□ -0.58
EPHB3-201ENST00000330394 FAM208BQ5VWN6 2430 aa11.4□□□□□ -0.58
EPHB3-201ENST00000330394 LOC105371242A0A075B767 164 aa11.4□□□□□ -0.59
EPHB3-201ENST00000330394 IGHV3OR16-10A0A075B7F0 116 aa11.4□□□□□ -0.59
EPHB3-201ENST00000330394 CDX4O14627 284 aaPredicted RBP11.4□□□□□ -0.59
EPHB3-201ENST00000330394 Q6ZPA2 131 aa11.4□□□□□ -0.59
EPHB3-201ENST00000330394 CENPVQ7Z7K6 275 aaPredicted RBP11.4□□□□□ -0.59
EPHB3-201ENST00000330394 C11orf52Q96A22 123 aa11.4□□□□□ -0.59
EPHB3-201ENST00000330394 TMEM14BQ9NUH8 114 aa11.4□□□□□ -0.59
EPHB3-201ENST00000330394 CD300EQ496F6 205 aaPredicted RBP11.39□□□□□ -0.59
EPHB3-201ENST00000330394 ADAMTSL5Q6ZMM2 481 aa11.39□□□□□ -0.59
EPHB3-201ENST00000330394 ODF3L1Q8IXM7 274 aa11.39□□□□□ -0.59
EPHB3-201ENST00000330394 LINC01560Q8TB33 94 aa11.39□□□□□ -0.59
EPHB3-201ENST00000330394 GLMPQ8WWB7 406 aa11.39□□□□□ -0.59
EPHB3-201ENST00000330394 KIR2DL4Q99706 377 aa11.39□□□□□ -0.59
EPHB3-201ENST00000330394 HTTP42858 3142 aa11.39□□□□□ -0.59
EPHB3-201ENST00000330394 TRAV8-2A0A0B4J237 113 aa11.39□□□□□ -0.59
EPHB3-201ENST00000330394 KIF26AQ9ULI4 1882 aaPredicted RBP11.39□□□□□ -0.59
EPHB3-201ENST00000330394 NXT2Q9NPJ8 142 aaKnown RBP11.39□□□□□ -0.59
EPHB3-201ENST00000330394 H0YJW9 148 aa11.38□□□□□ -0.59
EPHB3-201ENST00000330394 SMAD7O15105 426 aaKnown RBP11.38□□□□□ -0.59
EPHB3-201ENST00000330394 CRXO43186 299 aaPredicted RBP11.38□□□□□ -0.59
EPHB3-201ENST00000330394 SNCGO76070 127 aa11.38□□□□□ -0.59
EPHB3-201ENST00000330394 WNT2P09544 360 aa11.38□□□□□ -0.59
EPHB3-201ENST00000330394 SMIM27A0A1W2PRY6 76 aa11.38□□□□□ -0.59
EPHB3-201ENST00000330394 FAM106CPP0CH98 169 aa11.38□□□□□ -0.59
EPHB3-201ENST00000330394 TMEM200BQ69YZ2 307 aa11.38□□□□□ -0.59
EPHB3-201ENST00000330394 ACACBO00763 2458 aa11.38□□□□□ -0.59
EPHB3-201ENST00000330394 NDUFS8O00217 210 aa11.38□□□□□ -0.59
EPHB3-201ENST00000330394 MMP23AO75900 390 aa11.38□□□□□ -0.59
EPHB3-201ENST00000330394 CLEC19AQ6UXS0 136 aa11.38□□□□□ -0.59
EPHB3-201ENST00000330394 Q8NFD4 153 aa11.38□□□□□ -0.59
EPHB3-201ENST00000330394 TMEM167AQ8TBQ9 72 aa11.38□□□□□ -0.59
EPHB3-201ENST00000330394 UNC80Q8N2C7 3258 aa11.38□□□□□ -0.59
EPHB3-201ENST00000330394 IGLC7A0M8Q6 106 aa11.37□□□□□ -0.59
EPHB3-201ENST00000330394 ZNF815PA8K554 130 aa11.37□□□□□ -0.59
EPHB3-201ENST00000330394 TIMM23O14925 209 aa11.37□□□□□ -0.59
EPHB3-201ENST00000330394 ZNF56Q15929 161 aa11.37□□□□□ -0.59
EPHB3-201ENST00000330394 NACAE9PAV3 2078 aa11.37□□□□□ -0.59
EPHB3-201ENST00000330394 A0A1W2PPI3 338 aa11.37□□□□□ -0.59
EPHB3-201ENST00000330394 HOXA3O43365 443 aaPredicted RBP11.37□□□□□ -0.59
EPHB3-201ENST00000330394 SAP30O75446 220 aa11.37□□□□□ -0.59
EPHB3-201ENST00000330394 TOMM40O96008 361 aa11.37□□□□□ -0.59
EPHB3-201ENST00000330394 C11orf1Q9H5F2 150 aa11.37□□□□□ -0.59
EPHB3-201ENST00000330394 Q86TA4 180 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms