RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 SIGLECL1Q8N7X8 197 aa11.45□□□□□ -0.58
TPM3-206ENST00000330188 ZNF48Q96MX3 618 aaPredicted RBP11.45□□□□□ -0.58
TPM3-206ENST00000330188 NDUFAF3Q9BU61 184 aa11.45□□□□□ -0.58
TPM3-206ENST00000330188 RNF114Q9Y508 228 aa11.45□□□□□ -0.58
TPM3-206ENST00000330188 TRAV30A0A087WSZ9 112 aa11.45□□□□□ -0.58
TPM3-206ENST00000330188 F8W735 103 aaPredicted RBP11.45□□□□□ -0.58
TPM3-206ENST00000330188 GNG7O60262 68 aa11.45□□□□□ -0.58
TPM3-206ENST00000330188 TOX4O94842 621 aa11.45□□□□□ -0.58
TPM3-206ENST00000330188 P01737 135 aa11.45□□□□□ -0.58
TPM3-206ENST00000330188 MFAP4P55083 255 aa11.45□□□□□ -0.58
TPM3-206ENST00000330188 TOMM20LQ6UXN7 152 aa11.45□□□□□ -0.58
TPM3-206ENST00000330188 OR4F17Q8NGA8 305 aa11.45□□□□□ -0.58
TPM3-206ENST00000330188 FBXL7Q9UJT9 491 aa11.45□□□□□ -0.58
TPM3-206ENST00000330188 TRBV6-1A0A0K0K1D8 114 aa11.44□□□□□ -0.58
TPM3-206ENST00000330188 A8MWL6 223 aa11.44□□□□□ -0.58
TPM3-206ENST00000330188 HLA-DRB1P01911 266 aa11.44□□□□□ -0.58
TPM3-206ENST00000330188 TMEM11P17152 192 aa11.44□□□□□ -0.58
TPM3-206ENST00000330188 SIGLEC15Q6ZMC9 328 aa11.44□□□□□ -0.58
TPM3-206ENST00000330188 TEX43Q6ZNM6 134 aa11.44□□□□□ -0.58
TPM3-206ENST00000330188 Q71RC1 249 aaPredicted RBP11.44□□□□□ -0.58
TPM3-206ENST00000330188 BCL6BQ8N143 479 aaPredicted RBP11.44□□□□□ -0.58
TPM3-206ENST00000330188 PIP4P2Q8N4L2 257 aa11.44□□□□□ -0.58
TPM3-206ENST00000330188 C18orf32Q8TCD1 76 aa11.44□□□□□ -0.58
TPM3-206ENST00000330188 PRORYQ9H606 182 aa11.44□□□□□ -0.58
TPM3-206ENST00000330188 RNF24Q9Y225 148 aa11.44□□□□□ -0.58
TPM3-206ENST00000330188 TBL2Q9Y4P3 447 aaKnown RBP11.44□□□□□ -0.58
TPM3-206ENST00000330188 NPIPB6E9PJ23 425 aa11.44□□□□□ -0.58
TPM3-206ENST00000330188 OR2J3O76001 311 aa11.44□□□□□ -0.58
TPM3-206ENST00000330188 FCGR2BP31994 310 aaPredicted RBP11.44□□□□□ -0.58
TPM3-206ENST00000330188 AMTP48728 403 aa11.44□□□□□ -0.58
TPM3-206ENST00000330188 PRNTQ86SH4 94 aa11.44□□□□□ -0.58
TPM3-206ENST00000330188 CIARTQ8N365 385 aaPredicted RBP11.44□□□□□ -0.58
TPM3-206ENST00000330188 GTSF1Q8WW33 167 aa11.44□□□□□ -0.58
TPM3-206ENST00000330188 ITLN2Q8WWU7 325 aaPredicted RBP11.44□□□□□ -0.58
TPM3-206ENST00000330188 TMEM190Q8WZ59 177 aa11.44□□□□□ -0.58
TPM3-206ENST00000330188 SSBP4Q9BWG4 385 aaPredicted RBP11.44□□□□□ -0.58
TPM3-206ENST00000330188 IGHV2-70DA0A0C4DH43 119 aa11.43□□□□□ -0.58
TPM3-206ENST00000330188 ZNF324O75467 553 aaPredicted RBP11.43□□□□□ -0.58
TPM3-206ENST00000330188 EGR2P11161 476 aaPredicted RBP11.43□□□□□ -0.58
TPM3-206ENST00000330188 SFTPCP11686 197 aa11.43□□□□□ -0.58
TPM3-206ENST00000330188 CAMPP49913 170 aa11.43□□□□□ -0.58
TPM3-206ENST00000330188 EFNA4P52798 201 aa11.43□□□□□ -0.58
TPM3-206ENST00000330188 LYPD1Q8N2G4 141 aa11.43□□□□□ -0.58
TPM3-206ENST00000330188 DAZAP1Q96EP5 407 aaKnown RBP11.43□□□□□ -0.58
TPM3-206ENST00000330188 NRN1Q9NPD7 142 aa11.43□□□□□ -0.58
TPM3-206ENST00000330188 HIVEP3Q5T1R4 2406 aa11.43□□□□□ -0.58
TPM3-206ENST00000330188 NDUFB8O95169 186 aa11.42□□□□□ -0.58
TPM3-206ENST00000330188 PMCHP20382 165 aa11.42□□□□□ -0.58
TPM3-206ENST00000330188 TMEM75Q8N9X5 138 aa11.42□□□□□ -0.58
TPM3-206ENST00000330188 ZNF414Q96IQ9 312 aa11.42□□□□□ -0.58
TPM3-206ENST00000330188 GFRA4Q9GZZ7 299 aa11.42□□□□□ -0.58
TPM3-206ENST00000330188 C21orf62Q9NYP8 219 aa11.42□□□□□ -0.58
TPM3-206ENST00000330188 IGHV7-81A0A0B4J1V7 117 aa11.42□□□□□ -0.58
TPM3-206ENST00000330188 UQCRFS1P47985 274 aa11.42□□□□□ -0.58
TPM3-206ENST00000330188 HBBP68871 147 aa11.42□□□□□ -0.58
TPM3-206ENST00000330188 KLF5Q13887 457 aaPredicted RBP11.42□□□□□ -0.58
TPM3-206ENST00000330188 Q56UQ5 140 aa11.42□□□□□ -0.58
TPM3-206ENST00000330188 Q8N9W7 124 aa11.42□□□□□ -0.58
TPM3-206ENST00000330188 AJUBAQ96IF1 538 aa11.42□□□□□ -0.58
TPM3-206ENST00000330188 ALKBH7Q9BT30 221 aaPredicted RBP11.42□□□□□ -0.58
TPM3-206ENST00000330188 SOX21Q9Y651 276 aaPredicted RBP11.42□□□□□ -0.58
TPM3-206ENST00000330188 ZNF785A8K8V0 405 aa11.41□□□□□ -0.58
TPM3-206ENST00000330188 C16orf54Q6UWD8 224 aa11.41□□□□□ -0.58
TPM3-206ENST00000330188 VN1R17PQ8TDU5 208 aa11.41□□□□□ -0.58
TPM3-206ENST00000330188 PGLYRP4Q96LB8 373 aa11.41□□□□□ -0.58
TPM3-206ENST00000330188 SPTBN4Q9H254 2564 aa11.41□□□□□ -0.58
TPM3-206ENST00000330188 C19orf84I3L1E1 186 aa11.41□□□□□ -0.58
TPM3-206ENST00000330188 IGHV3-23P01764 117 aa11.41□□□□□ -0.58
TPM3-206ENST00000330188 COL8A1P27658 744 aa11.41□□□□□ -0.58
TPM3-206ENST00000330188 UBE2E1P51965 193 aa11.41□□□□□ -0.58
TPM3-206ENST00000330188 TDRG1Q3Y452 100 aa11.41□□□□□ -0.58
TPM3-206ENST00000330188 FAM120AOSQ5T036 256 aa11.41□□□□□ -0.58
TPM3-206ENST00000330188 S100A7AQ86SG5 101 aa11.41□□□□□ -0.58
TPM3-206ENST00000330188 NIT1Q86X76 327 aa11.41□□□□□ -0.58
TPM3-206ENST00000330188 Q8N976 141 aa11.41□□□□□ -0.58
TPM3-206ENST00000330188 OR4B1Q8NGF8 309 aa11.41□□□□□ -0.58
TPM3-206ENST00000330188 CSMD1Q96PZ7 3565 aa11.41□□□□□ -0.58
TPM3-206ENST00000330188 FAM231BA6NCW3 169 aa11.4□□□□□ -0.58
TPM3-206ENST00000330188 KRTDAPP60985 99 aa11.4□□□□□ -0.58
TPM3-206ENST00000330188 LMO4P61968 165 aa11.4□□□□□ -0.58
TPM3-206ENST00000330188 RBPMS2Q6ZRY4 209 aaKnown RBP11.4□□□□□ -0.58
TPM3-206ENST00000330188 OR2D3Q8NGH3 330 aa11.4□□□□□ -0.58
TPM3-206ENST00000330188 ZC2HC1AQ96GY0 325 aa11.4□□□□□ -0.58
TPM3-206ENST00000330188 BPESC1Q9GZL8 116 aa11.4□□□□□ -0.58
TPM3-206ENST00000330188 THYN1Q9P016 225 aa11.4□□□□□ -0.58
TPM3-206ENST00000330188 DIRC3C9JPN6 131 aa11.39□□□□□ -0.59
TPM3-206ENST00000330188 PSG3Q16557 428 aa11.39□□□□□ -0.59
TPM3-206ENST00000330188 FAM19A2Q8N3H0 131 aa11.39□□□□□ -0.59
TPM3-206ENST00000330188 PSG8Q9UQ74 426 aa11.39□□□□□ -0.59
TPM3-206ENST00000330188 ZFP30Q9Y2G7 519 aa11.39□□□□□ -0.59
TPM3-206ENST00000330188 SPTBN1Q01082 2364 aaKnown RBP11.39□□□□□ -0.59
TPM3-206ENST00000330188 OR2T8A6NH00 312 aa11.39□□□□□ -0.59
TPM3-206ENST00000330188 FAM106CPP0CH98 169 aa11.39□□□□□ -0.59
TPM3-206ENST00000330188 PRB4P10163 310 aaPredicted RBP11.39□□□□□ -0.59
TPM3-206ENST00000330188 PDE6HQ13956 83 aa11.39□□□□□ -0.59
TPM3-206ENST00000330188 PRR31Q5SQ13 230 aa11.39□□□□□ -0.59
TPM3-206ENST00000330188 ASCL2Q99929 193 aa11.39□□□□□ -0.59
TPM3-206ENST00000330188 C1RLQ9NZP8 487 aa11.39□□□□□ -0.59
TPM3-206ENST00000330188 WNK2Q9Y3S1 2297 aa11.39□□□□□ -0.59
TPM3-206ENST00000330188 K7EQM0 130 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms