RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 OR2J3O76001 311 aa15.79■□□□□ 0.12
CRLF3-201ENST00000324238 DLX6P56179 175 aa15.79■□□□□ 0.12
CRLF3-201ENST00000324238 FOXE3Q13461 319 aa15.79■□□□□ 0.12
CRLF3-201ENST00000324238 MPV17L2Q567V2 206 aa15.79■□□□□ 0.12
CRLF3-201ENST00000324238 C5orf17Q8NAS9 161 aa15.79■□□□□ 0.12
CRLF3-201ENST00000324238 TMEM155Q4W5P6 130 aa15.78■□□□□ 0.12
CRLF3-201ENST00000324238 MRPL52Q86TS9 123 aaKnown RBP15.78■□□□□ 0.12
CRLF3-201ENST00000324238 OR4F17Q8NGA8 305 aa15.78■□□□□ 0.12
CRLF3-201ENST00000324238 TMEM133Q9H2Q1 129 aa15.78■□□□□ 0.12
CRLF3-201ENST00000324238 SIGLEC9Q9Y336 463 aa15.78■□□□□ 0.12
CRLF3-201ENST00000324238 HRNRQ86YZ3 2850 aaPredicted RBP15.78■□□□□ 0.12
CRLF3-201ENST00000324238 M0R3E3 92 aa15.78■□□□□ 0.12
CRLF3-201ENST00000324238 LEPROTL1O95214 131 aa15.78■□□□□ 0.12
CRLF3-201ENST00000324238 SRSF12Q8WXF0 261 aaKnown RBP15.78■□□□□ 0.12
CRLF3-201ENST00000324238 C22orf15Q8WYQ4 148 aa15.78■□□□□ 0.12
CRLF3-201ENST00000324238 ZC2HC1AQ96GY0 325 aa15.78■□□□□ 0.12
CRLF3-201ENST00000324238 RBM14Q96PK6 669 aaKnown RBP15.78■□□□□ 0.12
CRLF3-201ENST00000324238 TOMM40O96008 361 aa15.78■□□□□ 0.12
CRLF3-201ENST00000324238 LTAP01374 205 aa15.78■□□□□ 0.12
CRLF3-201ENST00000324238 PRSS22Q9GZN4 317 aa15.78■□□□□ 0.12
CRLF3-201ENST00000324238 HIGD1AQ9Y241 93 aa15.78■□□□□ 0.12
CRLF3-201ENST00000324238 KLF12Q9Y4X4 402 aa15.78■□□□□ 0.12
CRLF3-201ENST00000324238 CRYGCP07315 174 aa15.77■□□□□ 0.12
CRLF3-201ENST00000324238 TMUB1Q9BVT8 246 aa15.77■□□□□ 0.12
CRLF3-201ENST00000324238 C19orf71A6NCJ1 209 aa15.77■□□□□ 0.11
CRLF3-201ENST00000324238 ZNF785A8K8V0 405 aa15.77■□□□□ 0.11
CRLF3-201ENST00000324238 LINC00614P0C842 121 aa15.77■□□□□ 0.11
CRLF3-201ENST00000324238 OR4A5Q8NH83 315 aa15.77■□□□□ 0.11
CRLF3-201ENST00000324238 RNASE8Q8TDE3 154 aaKnown RBP15.77■□□□□ 0.11
CRLF3-201ENST00000324238 SLC25A39Q9BZJ4 359 aaPredicted RBP15.77■□□□□ 0.11
CRLF3-201ENST00000324238 IGHV2-26A0A0B4J1V2 119 aa15.76■□□□□ 0.11
CRLF3-201ENST00000324238 ARMS2P0C7Q2 107 aa15.76■□□□□ 0.11
CRLF3-201ENST00000324238 RASL11AQ6T310 242 aa15.76■□□□□ 0.11
CRLF3-201ENST00000324238 C8orf46Q8TAG6 207 aa15.76■□□□□ 0.11
CRLF3-201ENST00000324238 TRGV9Q99603 122 aa15.76■□□□□ 0.11
CRLF3-201ENST00000324238 IGHV3OR16-8A0A075B7F1 116 aa15.76■□□□□ 0.11
CRLF3-201ENST00000324238 SYS1-DBNDD2H3BUS1 97 aa15.76■□□□□ 0.11
CRLF3-201ENST00000324238 CNIH1O95406 144 aa15.76■□□□□ 0.11
CRLF3-201ENST00000324238 TMEM30BQ3MIR4 351 aa15.76■□□□□ 0.11
CRLF3-201ENST00000324238 PPP1R27Q86WC6 154 aa15.76■□□□□ 0.11
CRLF3-201ENST00000324238 IGHV1-69-2A0A0G2JMI3 117 aa15.75■□□□□ 0.11
CRLF3-201ENST00000324238 INS-IGF2F8WCM5 200 aa15.75■□□□□ 0.11
CRLF3-201ENST00000324238 MC5RP33032 325 aa15.75■□□□□ 0.11
CRLF3-201ENST00000324238 RBPMS2Q6ZRY4 209 aaKnown RBP15.75■□□□□ 0.11
CRLF3-201ENST00000324238 Q86TA4 180 aa15.75■□□□□ 0.11
CRLF3-201ENST00000324238 TMEM116Q8NCL8 245 aa15.75■□□□□ 0.11
CRLF3-201ENST00000324238 IGHV1-3A0A0C4DH29 117 aa15.75■□□□□ 0.11
CRLF3-201ENST00000324238 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.75■□□□□ 0.11
CRLF3-201ENST00000324238 FAM106CPP0CH98 169 aa15.75■□□□□ 0.11
CRLF3-201ENST00000324238 C3orf36Q3SXR2 165 aa15.75■□□□□ 0.11
CRLF3-201ENST00000324238 FAM106AQ4KMX7 169 aa15.75■□□□□ 0.11
CRLF3-201ENST00000324238 TEX45Q8NA69 505 aa15.75■□□□□ 0.11
CRLF3-201ENST00000324238 STXBP6Q8NFX7 210 aa15.75■□□□□ 0.11
CRLF3-201ENST00000324238 CHRDL1Q9BU40 450 aa15.75■□□□□ 0.11
CRLF3-201ENST00000324238 HILPDAQ9Y5L2 63 aa15.75■□□□□ 0.11
CRLF3-201ENST00000324238 SHISA9B4DS77 424 aa15.75■□□□□ 0.11
CRLF3-201ENST00000324238 TEX22C9J3V5 150 aa15.75■□□□□ 0.11
CRLF3-201ENST00000324238 TNFRSF13BO14836 293 aaPredicted RBP15.75■□□□□ 0.11
CRLF3-201ENST00000324238 IGLC1P0CG04 106 aa15.75■□□□□ 0.11
CRLF3-201ENST00000324238 HTR1DP28221 377 aa15.75■□□□□ 0.11
CRLF3-201ENST00000324238 LDLRAD2Q5SZI1 272 aa15.75■□□□□ 0.11
CRLF3-201ENST00000324238 ETFRF1Q6IPR1 90 aa15.75■□□□□ 0.11
CRLF3-201ENST00000324238 LOC389332A0A1B0GUA5 103 aa15.74■□□□□ 0.11
CRLF3-201ENST00000324238 NUDT3O95989 172 aa15.74■□□□□ 0.11
CRLF3-201ENST00000324238 LGALS7P47929 136 aa15.74■□□□□ 0.11
CRLF3-201ENST00000324238 FBLN7Q53RD9 439 aa15.74■□□□□ 0.11
CRLF3-201ENST00000324238 FMC1Q96HJ9 113 aa15.74■□□□□ 0.11
CRLF3-201ENST00000324238 ZFHX3Q15911 3703 aa15.74■□□□□ 0.11
CRLF3-201ENST00000324238 LOC102724200A0A096LPH7 203 aaPredicted RBP15.74■□□□□ 0.11
CRLF3-201ENST00000324238 IGLV2-11P01706 119 aa15.74■□□□□ 0.11
CRLF3-201ENST00000324238 IGHV3-23P01764 117 aa15.74■□□□□ 0.11
CRLF3-201ENST00000324238 RASL11BQ9BPW5 248 aa15.73■□□□□ 0.11
CRLF3-201ENST00000324238 F11RQ9Y624 299 aaKnown RBP15.73■□□□□ 0.11
CRLF3-201ENST00000324238 CBY3A6NI87 242 aa15.73■□□□□ 0.11
CRLF3-201ENST00000324238 IGKV1-17P01599 117 aa15.73■□□□□ 0.11
CRLF3-201ENST00000324238 ATP5L2Q7Z4Y8 100 aa15.73■□□□□ 0.11
CRLF3-201ENST00000324238 LINC00311Q8N616 119 aa15.73■□□□□ 0.11
CRLF3-201ENST00000324238 RNF24Q9Y225 148 aa15.73■□□□□ 0.11
CRLF3-201ENST00000324238 COX11Q9Y6N1 276 aa15.73■□□□□ 0.11
CRLF3-201ENST00000324238 IGFL4Q6B9Z1 124 aa15.72■□□□□ 0.11
CRLF3-201ENST00000324238 MRPS16Q9Y3D3 137 aaKnown RBP15.72■□□□□ 0.11
CRLF3-201ENST00000324238 IGHV3-35A0A0C4DH35 117 aa15.72■□□□□ 0.11
CRLF3-201ENST00000324238 RPEQ96AT9 228 aa15.72■□□□□ 0.11
CRLF3-201ENST00000324238 ONECUT1Q9UBC0 465 aa15.72■□□□□ 0.11
CRLF3-201ENST00000324238 A0A087X0K7 114 aa15.72■□□□□ 0.11
CRLF3-201ENST00000324238 SERTM2A0A1B0GWG4 89 aa15.72■□□□□ 0.11
CRLF3-201ENST00000324238 C8orf49Q96NF6 230 aa15.72■□□□□ 0.11
CRLF3-201ENST00000324238 SPG11Q96JI7 2443 aa15.71■□□□□ 0.11
CRLF3-201ENST00000324238 FCGR2BP31994 310 aaPredicted RBP15.71■□□□□ 0.11
CRLF3-201ENST00000324238 VAMP3Q15836 100 aa15.71■□□□□ 0.11
CRLF3-201ENST00000324238 IGF2-ASQ6U949 168 aa15.71■□□□□ 0.11
CRLF3-201ENST00000324238 BUB1B-PAK6H3BSN5 160 aa15.71■□□□□ 0.11
CRLF3-201ENST00000324238 NCR2O95944 276 aa15.71■□□□□ 0.11
CRLF3-201ENST00000324238 LOXL1Q08397 574 aaPredicted RBP15.71■□□□□ 0.11
CRLF3-201ENST00000324238 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.7■□□□□ 0.1
CRLF3-201ENST00000324238 VSTM5A8MXK1 200 aa15.7■□□□□ 0.1
CRLF3-201ENST00000324238 SFTPCP11686 197 aa15.7■□□□□ 0.1
CRLF3-201ENST00000324238 MUC15Q8N387 334 aa15.7■□□□□ 0.1
CRLF3-201ENST00000324238 ZNF738Q8NE65 137 aa15.7■□□□□ 0.1
CRLF3-201ENST00000324238 SCNM1Q9BWG6 230 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms