RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 PAX2Q02962 417 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 MORN5Q5VZ52 161 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 IGFL4Q6B9Z1 124 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 DUX4L9Q6RFH8 374 aaPredicted RBP6.14□□□□□ -1.43
CDHR3-201ENST00000317716 FAM214BQ7L5A3 538 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 VSTM2AQ8TAG5 236 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 RAB1CQ92928 201 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 ABHD17AQ96GS6 310 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 CHRNA10Q9GZZ6 450 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 IDI2-AS1Q9NZ38 188 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 TSSC4Q9Y5U2 329 aaPredicted RBP6.14□□□□□ -1.43
CDHR3-201ENST00000317716 CD5LO43866 347 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 IL4P05112 153 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 ARMS2P0C7Q2 107 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 CD69Q07108 199 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 MYOZ3Q8TDC0 251 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 PROK2Q9HC23 129 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 ABCA12Q86UK0 2595 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 KALRNO60229 2985 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 TRAV17A0A0B4J275 112 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 YPEL1O60688 119 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 TNFRSF1AP19438 455 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 CFHR2P36980 270 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 B3GALT5-AS1P59052 145 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 ADAMTSL5Q6ZMM2 481 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 OR4A5Q8NH83 315 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 ZNF714Q96N38 554 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 YPEL2Q96QA6 119 aa6.14□□□□□ -1.43
CDHR3-201ENST00000317716 SETD2Q9BYW2 2564 aaPredicted RBP6.14□□□□□ -1.43
CDHR3-201ENST00000317716 ANKHD1Q8IWZ3 2542 aaKnown RBP6.14□□□□□ -1.43
CDHR3-201ENST00000317716 PET117Q6UWS5 81 aa6.13□□□□□ -1.43
CDHR3-201ENST00000317716 Q6ZS49 121 aa6.13□□□□□ -1.43
CDHR3-201ENST00000317716 AMN1Q8IY45 258 aa6.13□□□□□ -1.43
CDHR3-201ENST00000317716 RABAC1Q9UI14 185 aa6.13□□□□□ -1.43
CDHR3-201ENST00000317716 WNK1Q9H4A3 2382 aa6.13□□□□□ -1.43
CDHR3-201ENST00000317716 TAX1BP3O14907 124 aa6.13□□□□□ -1.43
CDHR3-201ENST00000317716 SSBP2P81877 361 aaPredicted RBP6.13□□□□□ -1.43
CDHR3-201ENST00000317716 SPANXN1Q5VSR9 72 aa6.13□□□□□ -1.43
CDHR3-201ENST00000317716 GFRALQ6UXV0 394 aa6.13□□□□□ -1.43
CDHR3-201ENST00000317716 MRPL52Q86TS9 123 aaKnown RBP6.13□□□□□ -1.43
CDHR3-201ENST00000317716 DPF1Q92782 380 aa6.13□□□□□ -1.43
CDHR3-201ENST00000317716 MRPL32Q9BYC8 188 aaKnown RBP6.13□□□□□ -1.43
CDHR3-201ENST00000317716 FBXL15Q9H469 300 aa6.13□□□□□ -1.43
CDHR3-201ENST00000317716 MRPL16Q9NX20 251 aaKnown RBP6.13□□□□□ -1.43
CDHR3-201ENST00000317716 RPUSD1Q9UJJ7 312 aaKnown RBP6.13□□□□□ -1.43
CDHR3-201ENST00000317716 HECTD1Q9ULT8 2610 aa6.13□□□□□ -1.43
CDHR3-201ENST00000317716 USP24Q9UPU5 2620 aa6.13□□□□□ -1.43
CDHR3-201ENST00000317716 C21orf140B9A014 251 aa6.13□□□□□ -1.43
CDHR3-201ENST00000317716 UPK2O00526 184 aa6.13□□□□□ -1.43
CDHR3-201ENST00000317716 CKS1BP61024 79 aa6.13□□□□□ -1.43
CDHR3-201ENST00000317716 FOXL2NBQ6ZUU3 175 aa6.13□□□□□ -1.43
CDHR3-201ENST00000317716 IFI27L1Q96BM0 104 aa6.13□□□□□ -1.43
CDHR3-201ENST00000317716 CSTL1Q9H114 145 aa6.13□□□□□ -1.43
CDHR3-201ENST00000317716 MRPL27Q9P0M9 148 aaKnown RBP6.13□□□□□ -1.43
CDHR3-201ENST00000317716 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.12□□□□□ -1.43
CDHR3-201ENST00000317716 NDUFS8O00217 210 aa6.12□□□□□ -1.43
CDHR3-201ENST00000317716 LEPP41159 167 aa6.12□□□□□ -1.43
CDHR3-201ENST00000317716 ZNF134P52741 427 aa6.12□□□□□ -1.43
CDHR3-201ENST00000317716 Q6ZR03 302 aa6.12□□□□□ -1.43
CDHR3-201ENST00000317716 LINC00470Q9BZP3 86 aa6.12□□□□□ -1.43
CDHR3-201ENST00000317716 MAP1LC3AQ9H492 121 aa6.12□□□□□ -1.43
CDHR3-201ENST00000317716 KBTBD11-OT1A0A1B0GTJ5 212 aa6.12□□□□□ -1.43
CDHR3-201ENST00000317716 TMEM213A2RRL7 107 aa6.12□□□□□ -1.43
CDHR3-201ENST00000317716 K7EM74 188 aa6.12□□□□□ -1.43
CDHR3-201ENST00000317716 PRRG2O14669 202 aa6.12□□□□□ -1.43
CDHR3-201ENST00000317716 AZU1P20160 251 aa6.12□□□□□ -1.43
CDHR3-201ENST00000317716 C1orf122Q6ZSJ8 110 aa6.12□□□□□ -1.43
CDHR3-201ENST00000317716 TNRC6AQ8NDV7 1962 aaKnown RBP6.12□□□□□ -1.43
CDHR3-201ENST00000317716 Q8TAT8 98 aa6.12□□□□□ -1.43
CDHR3-201ENST00000317716 ZNF479Q96JC4 524 aa6.12□□□□□ -1.43
CDHR3-201ENST00000317716 MBNL3Q9NUK0 354 aaKnown RBP6.12□□□□□ -1.43
CDHR3-201ENST00000317716 FOXA2Q9Y261 457 aaPredicted RBP6.12□□□□□ -1.43
CDHR3-201ENST00000317716 LRP4O75096 1905 aa6.12□□□□□ -1.43
CDHR3-201ENST00000317716 FAM90A27PA6NNH2 459 aa6.12□□□□□ -1.43
CDHR3-201ENST00000317716 NPIPB5A8MRT5 1133 aa6.12□□□□□ -1.43
CDHR3-201ENST00000317716 NPIPB11E5RHQ5 1161 aa6.12□□□□□ -1.43
CDHR3-201ENST00000317716 IGLV2-14P01704 120 aa6.12□□□□□ -1.43
CDHR3-201ENST00000317716 PRB1P04280 392 aa6.12□□□□□ -1.43
CDHR3-201ENST00000317716 LINC00310P59036 64 aa6.12□□□□□ -1.43
CDHR3-201ENST00000317716 SEC11AP67812 179 aa6.12□□□□□ -1.43
CDHR3-201ENST00000317716 KLF17Q5JT82 389 aaPredicted RBP6.12□□□□□ -1.43
CDHR3-201ENST00000317716 TEX48A0A1B0GUV7 120 aa6.11□□□□□ -1.43
CDHR3-201ENST00000317716 PMS2P5A8MQ11 134 aa6.11□□□□□ -1.43
CDHR3-201ENST00000317716 VDAC2P45880 294 aaPredicted RBP6.11□□□□□ -1.43
CDHR3-201ENST00000317716 COLCA1Q6ZS62 124 aa6.11□□□□□ -1.43
CDHR3-201ENST00000317716 SH2D6Q7Z4S9 175 aa6.11□□□□□ -1.43
CDHR3-201ENST00000317716 PCP2Q8IVA1 136 aa6.11□□□□□ -1.43
CDHR3-201ENST00000317716 ORMDL3Q8N138 153 aa6.11□□□□□ -1.43
CDHR3-201ENST00000317716 PRR7Q8TB68 274 aa6.11□□□□□ -1.43
CDHR3-201ENST00000317716 NEUROG1Q92886 237 aa6.11□□□□□ -1.43
CDHR3-201ENST00000317716 HTN1P15515 57 aa6.11□□□□□ -1.43
CDHR3-201ENST00000317716 PRCDQ00LT1 54 aa6.11□□□□□ -1.43
CDHR3-201ENST00000317716 HSD52Q0P140 79 aa6.11□□□□□ -1.43
CDHR3-201ENST00000317716 SRSF7Q16629 238 aaKnown RBP eCLIP6.11□□□□□ -1.43
CDHR3-201ENST00000317716 ANXA2RQ3ZCQ2 193 aa6.11□□□□□ -1.43
CDHR3-201ENST00000317716 TTC9CQ8N5M4 171 aa6.11□□□□□ -1.43
CDHR3-201ENST00000317716 JMJD8Q96S16 334 aa6.11□□□□□ -1.43
CDHR3-201ENST00000317716 VKORC1Q9BQB6 163 aa6.11□□□□□ -1.43
CDHR3-201ENST00000317716 MSRB2Q9Y3D2 182 aa6.11□□□□□ -1.43
CDHR3-201ENST00000317716 ZFHX4Q86UP3 3567 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms