RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 ACY3Q96HD9 319 aa11.29□□□□□ -0.6
FOXR1-201ENST00000317011 TNFSF18Q9UNG2 199 aa11.29□□□□□ -0.6
FOXR1-201ENST00000317011 IGKV1D-37A0A075B6S9 117 aa11.28□□□□□ -0.6
FOXR1-201ENST00000317011 SMCO3A2RU48 225 aa11.28□□□□□ -0.6
FOXR1-201ENST00000317011 PFDN1O60925 122 aa11.28□□□□□ -0.6
FOXR1-201ENST00000317011 IL4P05112 153 aa11.28□□□□□ -0.6
FOXR1-201ENST00000317011 EIF2B2P49770 351 aaKnown RBP11.28□□□□□ -0.6
FOXR1-201ENST00000317011 BAXQ07812 192 aa11.28□□□□□ -0.6
FOXR1-201ENST00000317011 INO80EQ8NBZ0 244 aaPredicted RBP11.28□□□□□ -0.6
FOXR1-201ENST00000317011 OR11H4Q8NGC9 324 aa11.28□□□□□ -0.6
FOXR1-201ENST00000317011 SLC35E1Q96K37 410 aa11.28□□□□□ -0.6
FOXR1-201ENST00000317011 HSPB11Q9Y547 144 aa11.28□□□□□ -0.6
FOXR1-201ENST00000317011 X6R8D5 127 aa11.28□□□□□ -0.6
FOXR1-201ENST00000317011 DEFB4AO15263 64 aa11.27□□□□□ -0.61
FOXR1-201ENST00000317011 C4BPBP20851 252 aa11.27□□□□□ -0.61
FOXR1-201ENST00000317011 TCTAP57738 103 aa11.27□□□□□ -0.61
FOXR1-201ENST00000317011 HBG1P69891 147 aa11.27□□□□□ -0.61
FOXR1-201ENST00000317011 HBG2P69892 147 aa11.27□□□□□ -0.61
FOXR1-201ENST00000317011 DLK1P80370 383 aa11.27□□□□□ -0.61
FOXR1-201ENST00000317011 AKR1C1Q04828 323 aa11.27□□□□□ -0.61
FOXR1-201ENST00000317011 GAMTQ14353 236 aa11.27□□□□□ -0.61
FOXR1-201ENST00000317011 CLINT1Q14677 625 aa11.27□□□□□ -0.61
FOXR1-201ENST00000317011 OR5C1Q8NGR4 320 aa11.27□□□□□ -0.61
FOXR1-201ENST00000317011 AQP10Q96PS8 301 aa11.27□□□□□ -0.61
FOXR1-201ENST00000317011 SMIM3Q9BZL3 60 aa11.27□□□□□ -0.61
FOXR1-201ENST00000317011 RNF222A6NCQ9 220 aa11.26□□□□□ -0.61
FOXR1-201ENST00000317011 C1QBP02746 253 aa11.26□□□□□ -0.61
FOXR1-201ENST00000317011 MIFP14174 115 aa11.26□□□□□ -0.61
FOXR1-201ENST00000317011 ZFP69Q49AA0 526 aa11.26□□□□□ -0.61
FOXR1-201ENST00000317011 ACTL10Q5JWF8 245 aa11.26□□□□□ -0.61
FOXR1-201ENST00000317011 OR51G1Q8NGK1 321 aa11.26□□□□□ -0.61
FOXR1-201ENST00000317011 NRN1Q9NPD7 142 aa11.26□□□□□ -0.61
FOXR1-201ENST00000317011 H3BMM0 161 aa11.25□□□□□ -0.61
FOXR1-201ENST00000317011 S100A11P31949 105 aa11.25□□□□□ -0.61
FOXR1-201ENST00000317011 SIGLEC15Q6ZMC9 328 aa11.25□□□□□ -0.61
FOXR1-201ENST00000317011 RPP25LQ8N5L8 163 aaKnown RBP11.25□□□□□ -0.61
FOXR1-201ENST00000317011 TMEM147Q9BVK8 224 aa11.25□□□□□ -0.61
FOXR1-201ENST00000317011 FBXL17Q9UF56 701 aa11.25□□□□□ -0.61
FOXR1-201ENST00000317011 APLNQ9ULZ1 77 aa11.25□□□□□ -0.61
FOXR1-201ENST00000317011 ELOA3CA0A087WX78 387 aaPredicted RBP11.24□□□□□ -0.61
FOXR1-201ENST00000317011 IGHV4-28A0A0C4DH34 117 aa11.24□□□□□ -0.61
FOXR1-201ENST00000317011 UBE2L5PA0A1B0GUS4 154 aa11.24□□□□□ -0.61
FOXR1-201ENST00000317011 HMSDA8MTL9 139 aa11.24□□□□□ -0.61
FOXR1-201ENST00000317011 C11orf94C9JXX5 98 aa11.24□□□□□ -0.61
FOXR1-201ENST00000317011 ZNF90Q03938 601 aa11.24□□□□□ -0.61
FOXR1-201ENST00000317011 PSMG4Q5JS54 123 aa11.24□□□□□ -0.61
FOXR1-201ENST00000317011 C2CD4CQ8TF44 421 aa11.24□□□□□ -0.61
FOXR1-201ENST00000317011 RNF125Q96EQ8 232 aa11.24□□□□□ -0.61
FOXR1-201ENST00000317011 GGACTQ9BVM4 153 aa11.24□□□□□ -0.61
FOXR1-201ENST00000317011 UQCC1Q9NVA1 299 aa11.24□□□□□ -0.61
FOXR1-201ENST00000317011 ZFP92A6NM28 416 aa11.23□□□□□ -0.61
FOXR1-201ENST00000317011 SNRPD3P62318 126 aaKnown RBP11.23□□□□□ -0.61
FOXR1-201ENST00000317011 ATP6V1FQ16864 119 aa11.23□□□□□ -0.61
FOXR1-201ENST00000317011 C1orf194Q5T5A4 169 aa11.23□□□□□ -0.61
FOXR1-201ENST00000317011 CLUHP3Q96NS8 147 aa11.23□□□□□ -0.61
FOXR1-201ENST00000317011 TRGV9Q99603 122 aa11.23□□□□□ -0.61
FOXR1-201ENST00000317011 ATP5SQ99766 215 aa11.23□□□□□ -0.61
FOXR1-201ENST00000317011 IGKV1OR2-108A0A075B7D4 117 aa11.22□□□□□ -0.61
FOXR1-201ENST00000317011 FNDC10F2Z333 226 aa11.22□□□□□ -0.61
FOXR1-201ENST00000317011 SOCS3O14543 225 aa11.22□□□□□ -0.61
FOXR1-201ENST00000317011 CXCL2P19875 107 aa11.22□□□□□ -0.61
FOXR1-201ENST00000317011 VWC2Q2TAL6 325 aa11.22□□□□□ -0.61
FOXR1-201ENST00000317011 THAP8Q8NA92 274 aa11.22□□□□□ -0.61
FOXR1-201ENST00000317011 HYLS1Q96M11 299 aa11.22□□□□□ -0.61
FOXR1-201ENST00000317011 WFDC1Q9HC57 220 aa11.22□□□□□ -0.61
FOXR1-201ENST00000317011 CLEC5AQ9NY25 188 aa11.22□□□□□ -0.61
FOXR1-201ENST00000317011 HLA-DRB4P13762 266 aa11.21□□□□□ -0.61
FOXR1-201ENST00000317011 HLA-DMBP28068 263 aa11.21□□□□□ -0.61
FOXR1-201ENST00000317011 NKX2-5P52952 324 aaPredicted RBP11.21□□□□□ -0.61
FOXR1-201ENST00000317011 PRR20EP86478 221 aa11.21□□□□□ -0.61
FOXR1-201ENST00000317011 PRR20CP86479 221 aa11.21□□□□□ -0.61
FOXR1-201ENST00000317011 PRR20DP86480 221 aa11.21□□□□□ -0.61
FOXR1-201ENST00000317011 PRR20BP86481 221 aa11.21□□□□□ -0.61
FOXR1-201ENST00000317011 PRR20AP86496 221 aa11.21□□□□□ -0.61
FOXR1-201ENST00000317011 OR2F1Q13607 317 aa11.21□□□□□ -0.61
FOXR1-201ENST00000317011 ZNF345Q14585 488 aa11.21□□□□□ -0.61
FOXR1-201ENST00000317011 TMEM144Q7Z5S9 345 aa11.21□□□□□ -0.61
FOXR1-201ENST00000317011 KCNRGQ8N5I3 272 aa11.21□□□□□ -0.61
FOXR1-201ENST00000317011 NEU1Q99519 415 aa11.21□□□□□ -0.61
FOXR1-201ENST00000317011 NPVFQ9HCQ7 196 aa11.21□□□□□ -0.61
FOXR1-201ENST00000317011 PFDN2Q9UHV9 154 aa11.21□□□□□ -0.61
FOXR1-201ENST00000317011 HLA-DRB4X5D2U9 266 aa11.21□□□□□ -0.61
FOXR1-201ENST00000317011 BOLA2-SMG1P6H3BVE0 249 aa11.2□□□□□ -0.62
FOXR1-201ENST00000317011 FGF7P21781 194 aa11.2□□□□□ -0.62
FOXR1-201ENST00000317011 NUTF2P61970 127 aaKnown RBP11.2□□□□□ -0.62
FOXR1-201ENST00000317011 TEPPQ6URK8 271 aa11.2□□□□□ -0.62
FOXR1-201ENST00000317011 ZNF705AQ6ZN79 300 aaPredicted RBP11.2□□□□□ -0.62
FOXR1-201ENST00000317011 C17orf77Q96MU5 243 aa11.2□□□□□ -0.62
FOXR1-201ENST00000317011 C1QTNF4Q9BXJ3 329 aa11.2□□□□□ -0.62
FOXR1-201ENST00000317011 WDR83OSQ9Y284 106 aa11.2□□□□□ -0.62
FOXR1-201ENST00000317011 A0A0D9SG52 128 aa11.19□□□□□ -0.62
FOXR1-201ENST00000317011 IFNA5P01569 189 aa11.19□□□□□ -0.62
FOXR1-201ENST00000317011 FABP1P07148 127 aa11.19□□□□□ -0.62
FOXR1-201ENST00000317011 C12orf74Q32Q52 190 aa11.19□□□□□ -0.62
FOXR1-201ENST00000317011 GDF5OSQ5U4N7 250 aa11.19□□□□□ -0.62
FOXR1-201ENST00000317011 TMUB2Q71RG4 321 aa11.19□□□□□ -0.62
FOXR1-201ENST00000317011 C9orf62Q8N4C0 152 aa11.19□□□□□ -0.62
FOXR1-201ENST00000317011 MGST2Q99735 147 aa11.19□□□□□ -0.62
FOXR1-201ENST00000317011 ARPC5LQ9BPX5 153 aa11.19□□□□□ -0.62
FOXR1-201ENST00000317011 ARL6Q9H0F7 186 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms